RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 KCNH5Q8NCM2 988 aa13.34□□□□□ -0.27
CBX5-202ENST00000439541 AMPHP49418 695 aa13.34□□□□□ -0.27
CBX5-202ENST00000439541 ZC3H6P61129 1189 aaKnown RBP13.34□□□□□ -0.27
CBX5-202ENST00000439541 HOXC9P31274 260 aa13.33□□□□□ -0.28
CBX5-202ENST00000439541 EIF4A2Q14240 407 aaKnown RBP13.33□□□□□ -0.28
CBX5-202ENST00000439541 RTL1A6NKG5 1358 aa13.33□□□□□ -0.28
CBX5-202ENST00000439541 U2AF1L5P0DN76 240 aaPredicted RBP13.32□□□□□ -0.28
CBX5-202ENST00000439541 IL13P35225 146 aa13.32□□□□□ -0.28
CBX5-202ENST00000439541 U2AF1Q01081 240 aaKnown RBP eCLIP13.32□□□□□ -0.28
CBX5-202ENST00000439541 RGPD1P0DJD0 1748 aa13.32□□□□□ -0.28
CBX5-202ENST00000439541 ARHGEF25Q86VW2 580 aa13.32□□□□□ -0.28
CBX5-202ENST00000439541 COL22A1Q8NFW1 1626 aaPredicted RBP13.31□□□□□ -0.28
CBX5-202ENST00000439541 KIAA0232Q92628 1395 aa13.31□□□□□ -0.28
CBX5-202ENST00000439541 LTV1Q96GA3 475 aaPredicted RBP13.31□□□□□ -0.28
CBX5-202ENST00000439541 CHRNA2Q15822 529 aa13.3□□□□□ -0.28
CBX5-202ENST00000439541 KIF24Q5T7B8 1368 aa13.3□□□□□ -0.28
CBX5-202ENST00000439541 HMOX1P09601 288 aa13.29□□□□□ -0.28
CBX5-202ENST00000439541 LRRC59Q96AG4 307 aaKnown RBP13.29□□□□□ -0.28
CBX5-202ENST00000439541 NUDCQ9Y266 331 aa13.29□□□□□ -0.28
CBX5-202ENST00000439541 COL18A1P39060 1754 aa13.29□□□□□ -0.28
CBX5-202ENST00000439541 RGPD5Q99666 1765 aa13.29□□□□□ -0.28
CBX5-202ENST00000439541 HAP1P54257 671 aaPredicted RBP13.29□□□□□ -0.28
CBX5-202ENST00000439541 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
CBX5-202ENST00000439541 IP6K1Q92551 441 aa13.29□□□□□ -0.28
CBX5-202ENST00000439541 AXIN2Q9Y2T1 843 aa13.29□□□□□ -0.28
CBX5-202ENST00000439541 SALL2Q9Y467 1007 aaPredicted RBP13.29□□□□□ -0.28
CBX5-202ENST00000439541 CPDO75976 1380 aa13.27□□□□□ -0.28
CBX5-202ENST00000439541 LMO7Q8WWI1 1683 aa13.27□□□□□ -0.29
CBX5-202ENST00000439541 RGPD2P0DJD1 1756 aa13.26□□□□□ -0.29
CBX5-202ENST00000439541 USHBP1Q8N6Y0 703 aa13.26□□□□□ -0.29
CBX5-202ENST00000439541 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
CBX5-202ENST00000439541 PRDM11Q9NQV5 511 aa13.26□□□□□ -0.29
CBX5-202ENST00000439541 ABCC6O95255 1503 aa13.25□□□□□ -0.29
CBX5-202ENST00000439541 APAF1O14727 1248 aa13.25□□□□□ -0.29
CBX5-202ENST00000439541 PRKAR2BP31323 418 aa13.25□□□□□ -0.29
CBX5-202ENST00000439541 SULT6B1Q6IMI4 303 aa13.25□□□□□ -0.29
CBX5-202ENST00000439541 EYA1Q99502 592 aa13.25□□□□□ -0.29
CBX5-202ENST00000439541 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
CBX5-202ENST00000439541 PLEKHF1Q96S99 279 aa13.25□□□□□ -0.29
CBX5-202ENST00000439541 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
CBX5-202ENST00000439541 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
CBX5-202ENST00000439541 IGSF1Q8N6C5 1336 aa13.24□□□□□ -0.29
CBX5-202ENST00000439541 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
CBX5-202ENST00000439541 RUNDC1Q96C34 613 aa13.24□□□□□ -0.29
CBX5-202ENST00000439541 ERBB3P21860 1342 aa13.24□□□□□ -0.29
CBX5-202ENST00000439541 HSPA1LP34931 641 aa13.23□□□□□ -0.29
CBX5-202ENST00000439541 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
CBX5-202ENST00000439541 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
CBX5-202ENST00000439541 NBPF6Q5VWK0 638 aa13.23□□□□□ -0.29
CBX5-202ENST00000439541 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
CBX5-202ENST00000439541 NBPF4Q96M43 638 aa13.23□□□□□ -0.29
CBX5-202ENST00000439541 COL5A2P05997 1499 aaPredicted RBP13.22□□□□□ -0.29
CBX5-202ENST00000439541 ADAMTS2O95450 1211 aa13.22□□□□□ -0.29
CBX5-202ENST00000439541 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
CBX5-202ENST00000439541 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
CBX5-202ENST00000439541 PHACTR3Q96KR7 559 aa13.22□□□□□ -0.29
CBX5-202ENST00000439541 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
CBX5-202ENST00000439541 KDRP35968 1356 aa13.22□□□□□ -0.29
CBX5-202ENST00000439541 FAM83GA6ND36 823 aa13.21□□□□□ -0.29
CBX5-202ENST00000439541 FCHSD2O94868 740 aa13.21□□□□□ -0.29
CBX5-202ENST00000439541 JCADQ9P266 1359 aa13.21□□□□□ -0.29
CBX5-202ENST00000439541 PLCH1Q4KWH8 1693 aa13.2□□□□□ -0.3
CBX5-202ENST00000439541 FAM208AQ9UK61 1670 aaKnown RBP13.2□□□□□ -0.3
CBX5-202ENST00000439541 NEFLP07196 543 aa13.2□□□□□ -0.3
CBX5-202ENST00000439541 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
CBX5-202ENST00000439541 LRP6O75581 1613 aa13.2□□□□□ -0.3
CBX5-202ENST00000439541 NCAPD2Q15021 1401 aa13.2□□□□□ -0.3
CBX5-202ENST00000439541 CSB-PGBD3P0DP91 1061 aa13.19□□□□□ -0.3
CBX5-202ENST00000439541 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
CBX5-202ENST00000439541 NLRP2Q9NX02 1062 aa13.18□□□□□ -0.3
CBX5-202ENST00000439541 ZNF521Q96K83 1311 aa13.17□□□□□ -0.3
CBX5-202ENST00000439541 TMPOP42166 694 aaKnown RBP13.17□□□□□ -0.3
CBX5-202ENST00000439541 BTG4Q9NY30 223 aa13.17□□□□□ -0.3
CBX5-202ENST00000439541 NRAPQ86VF7 1730 aa13.17□□□□□ -0.3
CBX5-202ENST00000439541 MEGF6O75095 1541 aa13.17□□□□□ -0.3
CBX5-202ENST00000439541 WDR17Q8IZU2 1322 aa13.16□□□□□ -0.3
CBX5-202ENST00000439541 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
CBX5-202ENST00000439541 LARP1Q6PKG0 1096 aaKnown RBP13.16□□□□□ -0.3
CBX5-202ENST00000439541 PNNQ9H307 717 aaKnown RBP13.16□□□□□ -0.3
CBX5-202ENST00000439541 DLG5Q8TDM6 1919 aa13.15□□□□□ -0.3
CBX5-202ENST00000439541 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
CBX5-202ENST00000439541 NEFMP07197 916 aa13.14□□□□□ -0.31
CBX5-202ENST00000439541 RIPK4P57078 832 aa13.14□□□□□ -0.31
CBX5-202ENST00000439541 MTHFSDQ2M296 383 aaKnown RBP13.14□□□□□ -0.31
CBX5-202ENST00000439541 TOM1L2Q6ZVM7 507 aa13.14□□□□□ -0.31
CBX5-202ENST00000439541 WWC1Q8IX03 1113 aa13.14□□□□□ -0.31
CBX5-202ENST00000439541 TSHZ2Q9NRE2 1034 aa13.14□□□□□ -0.31
CBX5-202ENST00000439541 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
CBX5-202ENST00000439541 FKBP8Q14318 412 aa13.13□□□□□ -0.31
CBX5-202ENST00000439541 THUMPD2Q9BTF0 503 aaKnown RBP13.13□□□□□ -0.31
CBX5-202ENST00000439541 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
CBX5-202ENST00000439541 EVA1CP58658 441 aa13.13□□□□□ -0.31
CBX5-202ENST00000439541 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
CBX5-202ENST00000439541 SLIT2O94813 1529 aa13.12□□□□□ -0.31
CBX5-202ENST00000439541 SPATA31A6Q5VVP1 1343 aa13.12□□□□□ -0.31
CBX5-202ENST00000439541 CRB1P82279 1406 aa13.12□□□□□ -0.31
CBX5-202ENST00000439541 USP35Q9P2H5 1018 aa13.12□□□□□ -0.31
CBX5-202ENST00000439541 DCTN1Q14203 1278 aa13.11□□□□□ -0.31
CBX5-202ENST00000439541 NWD2Q9ULI1 1742 aa13.11□□□□□ -0.31
CBX5-202ENST00000439541 CCDC27Q2M243 656 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms