RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 KIF20BQ96Q89 1820 aa22.92■■□□□ 1.26
TOM1-207ENST00000439512 SEPT12Q8IYM1 358 aa22.9■■□□□ 1.26
TOM1-207ENST00000439512 WNK3Q9BYP7 1800 aa22.89■■□□□ 1.26
TOM1-207ENST00000439512 AXIN2Q9Y2T1 843 aa22.88■■□□□ 1.25
TOM1-207ENST00000439512 A0A0G2JS52 829 aa22.87■■□□□ 1.25
TOM1-207ENST00000439512 C11orf95C9JLR9 678 aaPredicted RBP22.87■■□□□ 1.25
TOM1-207ENST00000439512 MYT1Q01538 1121 aa22.87■■□□□ 1.25
TOM1-207ENST00000439512 FAM98CQ17RN3 349 aaKnown RBP22.87■■□□□ 1.25
TOM1-207ENST00000439512 LARP1Q6PKG0 1096 aaKnown RBP22.87■■□□□ 1.25
TOM1-207ENST00000439512 COG3Q96JB2 828 aa22.87■■□□□ 1.25
TOM1-207ENST00000439512 CARD14Q9BXL6 1004 aa22.87■■□□□ 1.25
TOM1-207ENST00000439512 USP35Q9P2H5 1018 aa22.87■■□□□ 1.25
TOM1-207ENST00000439512 PARP4Q9UKK3 1724 aaKnown RBP22.85■■□□□ 1.25
TOM1-207ENST00000439512 CRB1P82279 1406 aa22.85■■□□□ 1.25
TOM1-207ENST00000439512 FYB1O15117 783 aa22.85■■□□□ 1.25
TOM1-207ENST00000439512 GGNBP2Q9H3C7 697 aa22.84■■□□□ 1.25
TOM1-207ENST00000439512 NSD3Q9BZ95 1437 aa22.82■■□□□ 1.24
TOM1-207ENST00000439512 BARGINQ6ZT62 677 aa22.82■■□□□ 1.24
TOM1-207ENST00000439512 LRRC37A3O60309 1634 aa22.81■■□□□ 1.24
TOM1-207ENST00000439512 WDR17Q8IZU2 1322 aa22.81■■□□□ 1.24
TOM1-207ENST00000439512 FBLN1P23142 703 aa22.8■■□□□ 1.24
TOM1-207ENST00000439512 TOM1L2Q6ZVM7 507 aa22.79■■□□□ 1.24
TOM1-207ENST00000439512 KRT27Q7Z3Y8 459 aa22.79■■□□□ 1.24
TOM1-207ENST00000439512 PANK3Q9H999 370 aa22.79■■□□□ 1.24
TOM1-207ENST00000439512 ANKRD26Q9UPS8 1709 aa22.79■■□□□ 1.24
TOM1-207ENST00000439512 CSB-PGBD3P0DP91 1061 aa22.78■■□□□ 1.24
TOM1-207ENST00000439512 TCP11L2Q8N4U5 519 aa22.78■■□□□ 1.24
TOM1-207ENST00000439512 THRAP3Q9Y2W1 955 aaKnown RBP22.78■■□□□ 1.24
TOM1-207ENST00000439512 DISP2A7MBM2 1401 aa22.77■■□□□ 1.24
TOM1-207ENST00000439512 PEAK1Q9H792 1746 aa22.77■■□□□ 1.23
TOM1-207ENST00000439512 BLMP54132 1417 aaPredicted RBP22.76■■□□□ 1.23
TOM1-207ENST00000439512 FAM208AQ9UK61 1670 aaKnown RBP22.76■■□□□ 1.23
TOM1-207ENST00000439512 ERBB3P21860 1342 aa22.76■■□□□ 1.23
TOM1-207ENST00000439512 TNS1Q9HBL0 1735 aaKnown RBP22.75■■□□□ 1.23
TOM1-207ENST00000439512 KIF7Q2M1P5 1343 aa22.75■■□□□ 1.23
TOM1-207ENST00000439512 MAP3K19Q56UN5 1328 aa22.74■■□□□ 1.23
TOM1-207ENST00000439512 AMPHP49418 695 aa22.73■■□□□ 1.23
TOM1-207ENST00000439512 IP6K1Q92551 441 aa22.73■■□□□ 1.23
TOM1-207ENST00000439512 CGNL1Q0VF96 1302 aa22.73■■□□□ 1.23
TOM1-207ENST00000439512 RGPD1P0DJD0 1748 aa22.72■■□□□ 1.23
TOM1-207ENST00000439512 CARD10Q9BWT7 1032 aa22.72■■□□□ 1.23
TOM1-207ENST00000439512 RRS1Q15050 365 aaKnown RBP22.71■■□□□ 1.23
TOM1-207ENST00000439512 RTL1A6NKG5 1358 aa22.71■■□□□ 1.23
TOM1-207ENST00000439512 FAM182BQ5T319 152 aa22.7■■□□□ 1.22
TOM1-207ENST00000439512 ANKRD24Q8TF21 1146 aa22.7■■□□□ 1.22
TOM1-207ENST00000439512 LTV1Q96GA3 475 aaPredicted RBP22.7■■□□□ 1.22
TOM1-207ENST00000439512 NLRP2Q9NX02 1062 aa22.7■■□□□ 1.22
TOM1-207ENST00000439512 RGPD2P0DJD1 1756 aa22.69■■□□□ 1.22
TOM1-207ENST00000439512 CCDC7Q96M83 1385 aa22.68■■□□□ 1.22
TOM1-207ENST00000439512 HOXC9P31274 260 aa22.68■■□□□ 1.22
TOM1-207ENST00000439512 PDE3BQ13370 1112 aa22.68■■□□□ 1.22
TOM1-207ENST00000439512 CCDC125Q86Z20 511 aa22.68■■□□□ 1.22
TOM1-207ENST00000439512 KNSTRNQ9Y448 316 aa22.66■■□□□ 1.22
TOM1-207ENST00000439512 KIF24Q5T7B8 1368 aa22.64■■□□□ 1.22
TOM1-207ENST00000439512 TNNT2P45379 298 aaPredicted RBP22.64■■□□□ 1.21
TOM1-207ENST00000439512 TNS2Q63HR2 1409 aa22.64■■□□□ 1.21
TOM1-207ENST00000439512 SBF2Q86WG5 1849 aa22.64■■□□□ 1.21
TOM1-207ENST00000439512 WASHC2AQ641Q2 1341 aa22.63■■□□□ 1.21
TOM1-207ENST00000439512 PPM1GO15355 546 aaPredicted RBP22.63■■□□□ 1.21
TOM1-207ENST00000439512 CDCA7Q9BWT1 371 aaPredicted RBP22.63■■□□□ 1.21
TOM1-207ENST00000439512 MAP2P11137 1827 aaKnown RBP22.63■■□□□ 1.21
TOM1-207ENST00000439512 DDB1Q16531 1140 aa22.62■■□□□ 1.21
TOM1-207ENST00000439512 HSP90AB2PQ58FF8 381 aa22.61■■□□□ 1.21
TOM1-207ENST00000439512 FAM196AQ6ZSG2 479 aa22.61■■□□□ 1.21
TOM1-207ENST00000439512 EMILIN1Q9Y6C2 1016 aa22.61■■□□□ 1.21
TOM1-207ENST00000439512 NSD2O96028 1365 aa22.61■■□□□ 1.21
TOM1-207ENST00000439512 INSRP06213 1382 aa22.61■■□□□ 1.21
TOM1-207ENST00000439512 FLT4P35916 1363 aa22.61■■□□□ 1.21
TOM1-207ENST00000439512 SHANK3Q9BYB0 1731 aa22.6■■□□□ 1.21
TOM1-207ENST00000439512 OVOS2A0A0G2JMS6 1433 aa22.6■■□□□ 1.21
TOM1-207ENST00000439512 BCL9O00512 1426 aa22.6■■□□□ 1.21
TOM1-207ENST00000439512 SF3B2Q13435 895 aaKnown RBP22.6■■□□□ 1.21
TOM1-207ENST00000439512 DEFB132Q7Z7B7 95 aa22.59■■□□□ 1.21
TOM1-207ENST00000439512 MORC1Q86VD1 984 aa22.59■■□□□ 1.21
TOM1-207ENST00000439512 SMG6Q86US8 1419 aaKnown RBP22.58■■□□□ 1.21
TOM1-207ENST00000439512 EXOC5O00471 708 aa22.58■■□□□ 1.21
TOM1-207ENST00000439512 NCAPD2Q15021 1401 aa22.57■■□□□ 1.2
TOM1-207ENST00000439512 PER1O15534 1290 aaPredicted RBP22.57■■□□□ 1.2
TOM1-207ENST00000439512 MARCH10Q8NA82 808 aaPredicted RBP22.57■■□□□ 1.2
TOM1-207ENST00000439512 POLKQ9UBT6 870 aa22.57■■□□□ 1.2
TOM1-207ENST00000439512 IL2RBP14784 551 aa22.56■■□□□ 1.2
TOM1-207ENST00000439512 AMER1Q5JTC6 1135 aaPredicted RBP22.56■■□□□ 1.2
TOM1-207ENST00000439512 RREB1Q92766 1687 aa22.55■■□□□ 1.2
TOM1-207ENST00000439512 NBPF6Q5VWK0 638 aa22.55■■□□□ 1.2
TOM1-207ENST00000439512 NBPF4Q96M43 638 aa22.55■■□□□ 1.2
TOM1-207ENST00000439512 MEGF6O75095 1541 aa22.55■■□□□ 1.2
TOM1-207ENST00000439512 RGPD3A6NKT7 1758 aaPredicted RBP22.54■■□□□ 1.2
TOM1-207ENST00000439512 RGPD4Q7Z3J3 1758 aa22.54■■□□□ 1.2
TOM1-207ENST00000439512 TRIM37O94972 964 aa22.54■■□□□ 1.2
TOM1-207ENST00000439512 NHSQ6T4R5 1651 aa22.52■■□□□ 1.2
TOM1-207ENST00000439512 CNGB1Q14028 1251 aaPredicted RBP22.52■■□□□ 1.2
TOM1-207ENST00000439512 CC2D1BQ5T0F9 858 aaKnown RBP22.51■■□□□ 1.19
TOM1-207ENST00000439512 USHBP1Q8N6Y0 703 aa22.51■■□□□ 1.19
TOM1-207ENST00000439512 NUP188Q5SRE5 1749 aa22.49■■□□□ 1.19
TOM1-207ENST00000439512 BAG6P46379 1132 aa22.49■■□□□ 1.19
TOM1-207ENST00000439512 PKD1L3Q7Z443 1732 aa22.48■■□□□ 1.19
TOM1-207ENST00000439512 APBA3O96018 575 aa22.47■■□□□ 1.19
TOM1-207ENST00000439512 EN1Q05925 392 aaPredicted RBP22.47■■□□□ 1.19
TOM1-207ENST00000439512 PTF1AQ7RTS3 328 aa22.47■■□□□ 1.19
TOM1-207ENST00000439512 ZEB1P37275 1124 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms