RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 GLI3P10071 1580 aa26.8■■□□□ 1.88
SEMA3B-206ENST00000439487 FBLN1P23142 703 aa26.79■■□□□ 1.88
SEMA3B-206ENST00000439487 EVA1CP58658 441 aa26.78■■□□□ 1.88
SEMA3B-206ENST00000439487 AXIN2Q9Y2T1 843 aa26.78■■□□□ 1.88
SEMA3B-206ENST00000439487 MAP2P11137 1827 aaKnown RBP26.76■■□□□ 1.87
SEMA3B-206ENST00000439487 COL5A2P05997 1499 aaPredicted RBP26.74■■□□□ 1.87
SEMA3B-206ENST00000439487 KNSTRNQ9Y448 316 aa26.74■■□□□ 1.87
SEMA3B-206ENST00000439487 CDK12Q9NYV4 1490 aaPredicted RBP26.74■■□□□ 1.87
SEMA3B-206ENST00000439487 SPATA31A5Q5VU36 1347 aa26.73■■□□□ 1.87
SEMA3B-206ENST00000439487 SPATA31A7Q8IWB4 1347 aa26.73■■□□□ 1.87
SEMA3B-206ENST00000439487 LARP1Q6PKG0 1096 aaKnown RBP26.73■■□□□ 1.87
SEMA3B-206ENST00000439487 RGS12O14924 1447 aa26.73■■□□□ 1.87
SEMA3B-206ENST00000439487 ABCC6O95255 1503 aa26.72■■□□□ 1.87
SEMA3B-206ENST00000439487 MAP3K19Q56UN5 1328 aa26.71■■□□□ 1.87
SEMA3B-206ENST00000439487 BRWD3Q6RI45 1802 aa26.7■■□□□ 1.87
SEMA3B-206ENST00000439487 RRS1Q15050 365 aaKnown RBP26.7■■□□□ 1.86
SEMA3B-206ENST00000439487 SPATA31A1Q5TZJ5 1347 aa26.69■■□□□ 1.86
SEMA3B-206ENST00000439487 PER1O15534 1290 aaPredicted RBP26.69■■□□□ 1.86
SEMA3B-206ENST00000439487 USP35Q9P2H5 1018 aa26.68■■□□□ 1.86
SEMA3B-206ENST00000439487 AMPHP49418 695 aa26.67■■□□□ 1.86
SEMA3B-206ENST00000439487 IP6K1Q92551 441 aa26.67■■□□□ 1.86
SEMA3B-206ENST00000439487 NSD2O96028 1365 aa26.67■■□□□ 1.86
SEMA3B-206ENST00000439487 CSB-PGBD3P0DP91 1061 aa26.66■■□□□ 1.86
SEMA3B-206ENST00000439487 FAM98CQ17RN3 349 aaKnown RBP26.66■■□□□ 1.86
SEMA3B-206ENST00000439487 AMER1Q5JTC6 1135 aaPredicted RBP26.66■■□□□ 1.86
SEMA3B-206ENST00000439487 WDR17Q8IZU2 1322 aa26.65■■□□□ 1.86
SEMA3B-206ENST00000439487 PEAK1Q9H792 1746 aa26.65■■□□□ 1.86
SEMA3B-206ENST00000439487 HOXC9P31274 260 aa26.65■■□□□ 1.86
SEMA3B-206ENST00000439487 TNNT2P45379 298 aaPredicted RBP26.65■■□□□ 1.86
SEMA3B-206ENST00000439487 TOM1L2Q6ZVM7 507 aa26.65■■□□□ 1.86
SEMA3B-206ENST00000439487 CRB1P82279 1406 aa26.65■■□□□ 1.86
SEMA3B-206ENST00000439487 ONECUT3O60422 494 aaPredicted RBP26.64■■□□□ 1.86
SEMA3B-206ENST00000439487 MORC1Q86VD1 984 aa26.63■■□□□ 1.85
SEMA3B-206ENST00000439487 SEPT12Q8IYM1 358 aa26.63■■□□□ 1.85
SEMA3B-206ENST00000439487 RGPD2P0DJD1 1756 aa26.63■■□□□ 1.85
SEMA3B-206ENST00000439487 BLMP54132 1417 aaPredicted RBP26.63■■□□□ 1.85
SEMA3B-206ENST00000439487 ANKRD24Q8TF21 1146 aa26.62■■□□□ 1.85
SEMA3B-206ENST00000439487 EMILIN1Q9Y6C2 1016 aa26.62■■□□□ 1.85
SEMA3B-206ENST00000439487 A0A0G2JS52 829 aa26.61■■□□□ 1.85
SEMA3B-206ENST00000439487 MYT1Q01538 1121 aa26.61■■□□□ 1.85
SEMA3B-206ENST00000439487 TCP11L2Q8N4U5 519 aa26.61■■□□□ 1.85
SEMA3B-206ENST00000439487 LTV1Q96GA3 475 aaPredicted RBP26.61■■□□□ 1.85
SEMA3B-206ENST00000439487 ERBB3P21860 1342 aa26.61■■□□□ 1.85
SEMA3B-206ENST00000439487 RTL1A6NKG5 1358 aa26.6■■□□□ 1.85
SEMA3B-206ENST00000439487 WNK3Q9BYP7 1800 aa26.6■■□□□ 1.85
SEMA3B-206ENST00000439487 THSD7AQ9UPZ6 1657 aa26.6■■□□□ 1.85
SEMA3B-206ENST00000439487 CNGB1Q14028 1251 aaPredicted RBP26.59■■□□□ 1.85
SEMA3B-206ENST00000439487 CC2D1BQ5T0F9 858 aaKnown RBP26.59■■□□□ 1.85
SEMA3B-206ENST00000439487 PPM1GO15355 546 aaPredicted RBP26.58■■□□□ 1.85
SEMA3B-206ENST00000439487 POLKQ9UBT6 870 aa26.58■■□□□ 1.85
SEMA3B-206ENST00000439487 FAM208AQ9UK61 1670 aaKnown RBP26.57■■□□□ 1.84
SEMA3B-206ENST00000439487 HSP90AB2PQ58FF8 381 aa26.57■■□□□ 1.84
SEMA3B-206ENST00000439487 BARGINQ6ZT62 677 aa26.57■■□□□ 1.84
SEMA3B-206ENST00000439487 CARD10Q9BWT7 1032 aa26.57■■□□□ 1.84
SEMA3B-206ENST00000439487 THRAP3Q9Y2W1 955 aaKnown RBP26.57■■□□□ 1.84
SEMA3B-206ENST00000439487 FLT4P35916 1363 aa26.57■■□□□ 1.84
SEMA3B-206ENST00000439487 NLRP2Q9NX02 1062 aa26.56■■□□□ 1.84
SEMA3B-206ENST00000439487 KIF24Q5T7B8 1368 aa26.56■■□□□ 1.84
SEMA3B-206ENST00000439487 INSRP06213 1382 aa26.53■■□□□ 1.84
SEMA3B-206ENST00000439487 NPC1L1Q9UHC9 1359 aa26.53■■□□□ 1.84
SEMA3B-206ENST00000439487 PARP4Q9UKK3 1724 aaKnown RBP26.53■■□□□ 1.84
SEMA3B-206ENST00000439487 DDX10Q13206 875 aaKnown RBP26.51■■□□□ 1.83
SEMA3B-206ENST00000439487 KRT27Q7Z3Y8 459 aa26.5■■□□□ 1.83
SEMA3B-206ENST00000439487 SMG6Q86US8 1419 aaKnown RBP26.48■■□□□ 1.83
SEMA3B-206ENST00000439487 LRRC37A3O60309 1634 aa26.47■■□□□ 1.83
SEMA3B-206ENST00000439487 NBPF6Q5VWK0 638 aa26.46■■□□□ 1.83
SEMA3B-206ENST00000439487 NBPF4Q96M43 638 aa26.46■■□□□ 1.83
SEMA3B-206ENST00000439487 DISP2A7MBM2 1401 aa26.46■■□□□ 1.83
SEMA3B-206ENST00000439487 EP400Q96L91 3159 aa26.46■■□□□ 1.83
SEMA3B-206ENST00000439487 FAM182BQ5T319 152 aa26.44■■□□□ 1.82
SEMA3B-206ENST00000439487 USHBP1Q8N6Y0 703 aa26.44■■□□□ 1.82
SEMA3B-206ENST00000439487 CDCA7Q9BWT1 371 aaPredicted RBP26.44■■□□□ 1.82
SEMA3B-206ENST00000439487 PDE3BQ13370 1112 aa26.43■■□□□ 1.82
SEMA3B-206ENST00000439487 ZNF316A6NFI3 1004 aaPredicted RBP26.42■■□□□ 1.82
SEMA3B-206ENST00000439487 UPF1Q92900 1129 aaKnown RBP eCLIP26.42■■□□□ 1.82
SEMA3B-206ENST00000439487 IL2RBP14784 551 aa26.41■■□□□ 1.82
SEMA3B-206ENST00000439487 MTHFSP49914 203 aa26.41■■□□□ 1.82
SEMA3B-206ENST00000439487 EIF4A2Q14240 407 aaKnown RBP26.41■■□□□ 1.82
SEMA3B-206ENST00000439487 DDB1Q16531 1140 aa26.41■■□□□ 1.82
SEMA3B-206ENST00000439487 KAT6BQ8WYB5 2073 aa26.4■■□□□ 1.82
SEMA3B-206ENST00000439487 SRCAPQ6ZRS2 3230 aa26.39■■□□□ 1.82
SEMA3B-206ENST00000439487 EXOC5O00471 708 aa26.38■■□□□ 1.81
SEMA3B-206ENST00000439487 EYA1Q99502 592 aa26.38■■□□□ 1.81
SEMA3B-206ENST00000439487 MEGF6O75095 1541 aa26.34■■□□□ 1.81
SEMA3B-206ENST00000439487 TNS2Q63HR2 1409 aa26.34■■□□□ 1.81
SEMA3B-206ENST00000439487 SBF2Q86WG5 1849 aa26.33■■□□□ 1.81
SEMA3B-206ENST00000439487 MARCH10Q8NA82 808 aaPredicted RBP26.33■■□□□ 1.81
SEMA3B-206ENST00000439487 NCAPD2Q15021 1401 aa26.32■■□□□ 1.8
SEMA3B-206ENST00000439487 SHANK3Q9BYB0 1731 aa26.32■■□□□ 1.8
SEMA3B-206ENST00000439487 PPP2R1AP30153 589 aa26.32■■□□□ 1.8
SEMA3B-206ENST00000439487 FAM196AQ6ZSG2 479 aa26.32■■□□□ 1.8
SEMA3B-206ENST00000439487 RAPGEF4Q8WZA2 1011 aa26.32■■□□□ 1.8
SEMA3B-206ENST00000439487 IL13P35225 146 aa26.31■■□□□ 1.8
SEMA3B-206ENST00000439487 TATP17735 454 aaPredicted RBP26.3■■□□□ 1.8
SEMA3B-206ENST00000439487 RGPD1P0DJD0 1748 aa26.3■■□□□ 1.8
SEMA3B-206ENST00000439487 PARD3Q8TEW0 1356 aa26.3■■□□□ 1.8
SEMA3B-206ENST00000439487 IGSF1Q8N6C5 1336 aa26.29■■□□□ 1.8
SEMA3B-206ENST00000439487 OVOS2A0A0G2JMS6 1433 aa26.29■■□□□ 1.8
SEMA3B-206ENST00000439487 ZCRB1Q8TBF4 217 aaKnown RBP26.27■■□□□ 1.8
SEMA3B-206ENST00000439487 COL3A1P02461 1466 aaPredicted RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms