RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 NGDNQ8NEJ9 315 aaKnown RBP7.65□□□□□ -1.19
BDNF-211ENST00000439476 SSH1Q8WYL5 1049 aa7.65□□□□□ -1.19
BDNF-211ENST00000439476 TNPO1Q92973 898 aaKnown RBP7.65□□□□□ -1.19
BDNF-211ENST00000439476 CCDC47Q96A33 483 aaKnown RBP7.65□□□□□ -1.19
BDNF-211ENST00000439476 NSD3Q9BZ95 1437 aa7.65□□□□□ -1.19
BDNF-211ENST00000439476 NEXNQ0ZGT2 675 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 ZSCAN30Q86W11 494 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 DIAPH3Q9NSV4 1193 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 LETM1O95202 739 aaPredicted RBP7.64□□□□□ -1.19
BDNF-211ENST00000439476 IPO7O95373 1038 aaKnown RBP7.64□□□□□ -1.19
BDNF-211ENST00000439476 TNNT1P13805 278 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 PRKAR2BP31323 418 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 SEMA3FQ13275 785 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 TEX35Q5T0J7 233 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 SYNE3Q6ZMZ3 975 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 UHRF1BP1Q6BDS2 1440 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 MBD3O95983 291 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 PRR29P0C7W0 189 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 RASSF8Q8NHQ8 419 aa7.64□□□□□ -1.19
BDNF-211ENST00000439476 TMPOP42166 694 aaKnown RBP7.64□□□□□ -1.19
BDNF-211ENST00000439476 DDX58O95786 925 aaKnown RBP7.63□□□□□ -1.19
BDNF-211ENST00000439476 NEK4P51957 841 aa7.63□□□□□ -1.19
BDNF-211ENST00000439476 ACBD3Q9H3P7 528 aa7.63□□□□□ -1.19
BDNF-211ENST00000439476 NUP153P49790 1475 aaKnown RBP7.63□□□□□ -1.19
BDNF-211ENST00000439476 ARHGEF12Q9NZN5 1544 aa7.63□□□□□ -1.19
BDNF-211ENST00000439476 AKAP17AQ02040 695 aaKnown RBP7.63□□□□□ -1.19
BDNF-211ENST00000439476 MLECQ14165 292 aa7.63□□□□□ -1.19
BDNF-211ENST00000439476 SPINK5Q9NQ38 1064 aaPredicted RBP7.63□□□□□ -1.19
BDNF-211ENST00000439476 GPRASP1Q5JY77 1395 aa7.63□□□□□ -1.19
BDNF-211ENST00000439476 MMP14P50281 582 aa7.63□□□□□ -1.19
BDNF-211ENST00000439476 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.63□□□□□ -1.19
BDNF-211ENST00000439476 ADAMTS12P58397 1594 aa7.63□□□□□ -1.19
BDNF-211ENST00000439476 ERC2O15083 957 aa7.62□□□□□ -1.19
BDNF-211ENST00000439476 TRIM27P14373 513 aa7.62□□□□□ -1.19
BDNF-211ENST00000439476 TWISTNBQ3B726 338 aaPredicted RBP7.62□□□□□ -1.19
BDNF-211ENST00000439476 GCC2Q8IWJ2 1684 aa7.62□□□□□ -1.19
BDNF-211ENST00000439476 PSEN1P49768 467 aa7.62□□□□□ -1.19
BDNF-211ENST00000439476 TRIM34Q9BYJ4 488 aa7.62□□□□□ -1.19
BDNF-211ENST00000439476 ARGLU1Q9NWB6 273 aaPredicted RBP7.62□□□□□ -1.19
BDNF-211ENST00000439476 GRIN2AQ12879 1464 aa7.62□□□□□ -1.19
BDNF-211ENST00000439476 SCAF11Q99590 1463 aaKnown RBP7.62□□□□□ -1.19
BDNF-211ENST00000439476 LOC102724159A0A0B4J2E5 919 aa7.62□□□□□ -1.19
BDNF-211ENST00000439476 TRIM29Q14134 588 aa7.62□□□□□ -1.19
BDNF-211ENST00000439476 PWP2Q15269 919 aaKnown RBP7.62□□□□□ -1.19
BDNF-211ENST00000439476 TPD52L1Q16890 204 aaPredicted RBP7.62□□□□□ -1.19
BDNF-211ENST00000439476 KIF14Q15058 1648 aa7.62□□□□□ -1.19
BDNF-211ENST00000439476 KDM4AO75164 1064 aa7.62□□□□□ -1.19
BDNF-211ENST00000439476 DNMT1P26358 1616 aaKnown RBP7.62□□□□□ -1.19
BDNF-211ENST00000439476 SSFA2P28290 1259 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 CDR1P51861 262 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 C1orf141Q5JVX7 400 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 ZNF692Q9BU19 519 aaPredicted RBP7.61□□□□□ -1.19
BDNF-211ENST00000439476 TNNQ9UQP3 1299 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 KDM6BO15054 1643 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 MAGI3Q5TCQ9 1506 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 RLBP1P12271 317 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 TEFQ10587 303 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 PIK3R5Q8WYR1 880 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 GTPBP4Q9BZE4 634 aaKnown RBP7.61□□□□□ -1.19
BDNF-211ENST00000439476 TSPY26PQ9H489 355 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 ZMYM4Q5VZL5 1548 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 ASXL1Q8IXJ9 1541 aa7.61□□□□□ -1.19
BDNF-211ENST00000439476 EGFL6Q8IUX8 553 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 CHMP3Q9Y3E7 222 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 SH3BP1Q9Y3L3 701 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 HMGN5P82970 282 aaKnown RBP7.6□□□□□ -1.19
BDNF-211ENST00000439476 CBX1P83916 185 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 HSP90AB3PQ58FF7 597 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 BLMP54132 1417 aaPredicted RBP7.6□□□□□ -1.19
BDNF-211ENST00000439476 UQCRHLA0A096LP55 91 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 NUTM2FA1L443 756 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 CCP110O43303 1012 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 UQCRHP07919 91 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 AMOTL1Q8IY63 956 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 NAT10Q9H0A0 1025 aaKnown RBP7.6□□□□□ -1.19
BDNF-211ENST00000439476 COL17A1Q9UMD9 1497 aaPredicted RBP7.6□□□□□ -1.19
BDNF-211ENST00000439476 RAPGEF6Q8TEU7 1601 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 PDCP20941 246 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 SMC3Q9UQE7 1217 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 INSRP06213 1382 aa7.6□□□□□ -1.19
BDNF-211ENST00000439476 HDAC1Q13547 482 aaPredicted RBP7.59□□□□□ -1.19
BDNF-211ENST00000439476 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.59□□□□□ -1.19
BDNF-211ENST00000439476 ADGRF5Q8IZF2 1346 aa7.59□□□□□ -1.19
BDNF-211ENST00000439476 TRDNQ13061 729 aa7.59□□□□□ -1.19
BDNF-211ENST00000439476 FKBP5Q13451 457 aaPredicted RBP7.59□□□□□ -1.19
BDNF-211ENST00000439476 SAMD9Q5K651 1589 aa7.59□□□□□ -1.19
BDNF-211ENST00000439476 PIK3C2GO75747 1445 aa7.59□□□□□ -1.19
BDNF-211ENST00000439476 NUP160Q12769 1436 aa7.59□□□□□ -1.19
BDNF-211ENST00000439476 ITSN2Q9NZM3 1697 aa7.59□□□□□ -1.19
BDNF-211ENST00000439476 HIP1O00291 1037 aa7.59□□□□□ -1.19
BDNF-211ENST00000439476 ZNF500O60304 480 aaPredicted RBP7.59□□□□□ -1.19
BDNF-211ENST00000439476 IFIT2P09913 472 aaKnown RBP7.59□□□□□ -1.19
BDNF-211ENST00000439476 BMP2KLQ5H9B9 411 aa7.59□□□□□ -1.19
BDNF-211ENST00000439476 CCDC73Q6ZRK6 1079 aa7.59□□□□□ -1.19
BDNF-211ENST00000439476 ARMCX6Q7L4S7 300 aa7.59□□□□□ -1.19
BDNF-211ENST00000439476 ZNF513Q8N8E2 541 aaPredicted RBP7.59□□□□□ -1.19
BDNF-211ENST00000439476 CARD10Q9BWT7 1032 aa7.59□□□□□ -1.19
BDNF-211ENST00000439476 VPS37CA5D8V6 355 aaPredicted RBP7.59□□□□□ -1.2
BDNF-211ENST00000439476 PSMA5P28066 241 aa7.59□□□□□ -1.2
BDNF-211ENST00000439476 IRX5P78411 483 aaPredicted RBP7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms