RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 EP400Q96L91 3159 aa28.58■■■□□ 2.17
UBE2F-212ENST00000439338 RGPD5Q99666 1765 aa28.57■■■□□ 2.16
UBE2F-212ENST00000439338 USP35Q9P2H5 1018 aa28.57■■■□□ 2.16
UBE2F-212ENST00000439338 KRT27Q7Z3Y8 459 aa28.55■■■□□ 2.16
UBE2F-212ENST00000439338 AXIN2Q9Y2T1 843 aa28.55■■■□□ 2.16
UBE2F-212ENST00000439338 LTN1O94822 1766 aa28.55■■■□□ 2.16
UBE2F-212ENST00000439338 ABCC6O95255 1503 aa28.53■■■□□ 2.16
UBE2F-212ENST00000439338 CRB1P82279 1406 aa28.52■■■□□ 2.16
UBE2F-212ENST00000439338 TCP11L2Q8N4U5 519 aa28.51■■■□□ 2.15
UBE2F-212ENST00000439338 BARGINQ6ZT62 677 aa28.5■■■□□ 2.15
UBE2F-212ENST00000439338 POLR3GLQ9BT43 218 aa28.5■■■□□ 2.15
UBE2F-212ENST00000439338 KIF20BQ96Q89 1820 aa28.49■■■□□ 2.15
UBE2F-212ENST00000439338 COG3Q96JB2 828 aa28.49■■■□□ 2.15
UBE2F-212ENST00000439338 WDR17Q8IZU2 1322 aa28.48■■■□□ 2.15
UBE2F-212ENST00000439338 TOM1L2Q6ZVM7 507 aa28.47■■■□□ 2.15
UBE2F-212ENST00000439338 THRAP3Q9Y2W1 955 aaKnown RBP28.47■■■□□ 2.15
UBE2F-212ENST00000439338 NSD3Q9BZ95 1437 aa28.44■■■□□ 2.14
UBE2F-212ENST00000439338 WNK3Q9BYP7 1800 aa28.44■■■□□ 2.14
UBE2F-212ENST00000439338 FYB1O15117 783 aa28.44■■■□□ 2.14
UBE2F-212ENST00000439338 CSB-PGBD3P0DP91 1061 aa28.44■■■□□ 2.14
UBE2F-212ENST00000439338 CARD14Q9BXL6 1004 aa28.44■■■□□ 2.14
UBE2F-212ENST00000439338 GGNBP2Q9H3C7 697 aa28.44■■■□□ 2.14
UBE2F-212ENST00000439338 BLMP54132 1417 aaPredicted RBP28.43■■■□□ 2.14
UBE2F-212ENST00000439338 PARP4Q9UKK3 1724 aaKnown RBP28.43■■■□□ 2.14
UBE2F-212ENST00000439338 FAM182BQ5T319 152 aa28.43■■■□□ 2.14
UBE2F-212ENST00000439338 CCDC125Q86Z20 511 aa28.43■■■□□ 2.14
UBE2F-212ENST00000439338 ERBB3P21860 1342 aa28.39■■■□□ 2.13
UBE2F-212ENST00000439338 FBLN1P23142 703 aa28.38■■■□□ 2.13
UBE2F-212ENST00000439338 CARD10Q9BWT7 1032 aa28.38■■■□□ 2.13
UBE2F-212ENST00000439338 LRRC37A3O60309 1634 aa28.37■■■□□ 2.13
UBE2F-212ENST00000439338 MAP3K19Q56UN5 1328 aa28.37■■■□□ 2.13
UBE2F-212ENST00000439338 C11orf95C9JLR9 678 aaPredicted RBP28.36■■■□□ 2.13
UBE2F-212ENST00000439338 PDE3BQ13370 1112 aa28.36■■■□□ 2.13
UBE2F-212ENST00000439338 ANKRD24Q8TF21 1146 aa28.35■■■□□ 2.13
UBE2F-212ENST00000439338 IP6K1Q92551 441 aa28.35■■■□□ 2.13
UBE2F-212ENST00000439338 RGPD1P0DJD0 1748 aa28.35■■■□□ 2.13
UBE2F-212ENST00000439338 SF3B2Q13435 895 aaKnown RBP28.34■■■□□ 2.13
UBE2F-212ENST00000439338 CCDC7Q96M83 1385 aa28.34■■■□□ 2.13
UBE2F-212ENST00000439338 DISP2A7MBM2 1401 aa28.32■■■□□ 2.12
UBE2F-212ENST00000439338 HOXC9P31274 260 aa28.31■■■□□ 2.12
UBE2F-212ENST00000439338 AMPHP49418 695 aa28.31■■■□□ 2.12
UBE2F-212ENST00000439338 RRS1Q15050 365 aaKnown RBP28.31■■■□□ 2.12
UBE2F-212ENST00000439338 DEFB132Q7Z7B7 95 aa28.31■■■□□ 2.12
UBE2F-212ENST00000439338 NLRP2Q9NX02 1062 aa28.31■■■□□ 2.12
UBE2F-212ENST00000439338 TNS1Q9HBL0 1735 aaKnown RBP28.3■■■□□ 2.12
UBE2F-212ENST00000439338 FAM208AQ9UK61 1670 aaKnown RBP28.3■■■□□ 2.12
UBE2F-212ENST00000439338 CGNL1Q0VF96 1302 aa28.3■■■□□ 2.12
UBE2F-212ENST00000439338 FAM196AQ6ZSG2 479 aa28.3■■■□□ 2.12
UBE2F-212ENST00000439338 RTL1A6NKG5 1358 aa28.29■■■□□ 2.12
UBE2F-212ENST00000439338 DDB1Q16531 1140 aa28.29■■■□□ 2.12
UBE2F-212ENST00000439338 LTV1Q96GA3 475 aaPredicted RBP28.29■■■□□ 2.12
UBE2F-212ENST00000439338 CDCA7Q9BWT1 371 aaPredicted RBP28.29■■■□□ 2.12
UBE2F-212ENST00000439338 PANK3Q9H999 370 aa28.29■■■□□ 2.12
UBE2F-212ENST00000439338 ANKRD26Q9UPS8 1709 aa28.27■■■□□ 2.12
UBE2F-212ENST00000439338 PEAK1Q9H792 1746 aa28.26■■■□□ 2.12
UBE2F-212ENST00000439338 KIF7Q2M1P5 1343 aa28.26■■■□□ 2.11
UBE2F-212ENST00000439338 TRIM37O94972 964 aa28.24■■■□□ 2.11
UBE2F-212ENST00000439338 BAG6P46379 1132 aa28.24■■■□□ 2.11
UBE2F-212ENST00000439338 OVOS2A0A0G2JMS6 1433 aa28.24■■■□□ 2.11
UBE2F-212ENST00000439338 RGPD2P0DJD1 1756 aa28.24■■■□□ 2.11
UBE2F-212ENST00000439338 TNS2Q63HR2 1409 aa28.22■■■□□ 2.11
UBE2F-212ENST00000439338 FLT4P35916 1363 aa28.21■■■□□ 2.11
UBE2F-212ENST00000439338 EXOC5O00471 708 aa28.19■■■□□ 2.1
UBE2F-212ENST00000439338 IL2RBP14784 551 aa28.19■■■□□ 2.1
UBE2F-212ENST00000439338 MARCH10Q8NA82 808 aaPredicted RBP28.19■■■□□ 2.1
UBE2F-212ENST00000439338 EMILIN1Q9Y6C2 1016 aa28.19■■■□□ 2.1
UBE2F-212ENST00000439338 MAP2P11137 1827 aaKnown RBP28.19■■■□□ 2.1
UBE2F-212ENST00000439338 SBF2Q86WG5 1849 aa28.19■■■□□ 2.1
UBE2F-212ENST00000439338 KIF24Q5T7B8 1368 aa28.19■■■□□ 2.1
UBE2F-212ENST00000439338 SMG6Q86US8 1419 aaKnown RBP28.18■■■□□ 2.1
UBE2F-212ENST00000439338 INSRP06213 1382 aa28.17■■■□□ 2.1
UBE2F-212ENST00000439338 EN1Q05925 392 aaPredicted RBP28.17■■■□□ 2.1
UBE2F-212ENST00000439338 HSP90AB2PQ58FF8 381 aa28.17■■■□□ 2.1
UBE2F-212ENST00000439338 NSD2O96028 1365 aa28.15■■■□□ 2.1
UBE2F-212ENST00000439338 APBA3O96018 575 aa28.13■■■□□ 2.09
UBE2F-212ENST00000439338 TNNT2P45379 298 aaPredicted RBP28.13■■■□□ 2.09
UBE2F-212ENST00000439338 BCL9O00512 1426 aa28.12■■■□□ 2.09
UBE2F-212ENST00000439338 PPM1GO15355 546 aaPredicted RBP28.12■■■□□ 2.09
UBE2F-212ENST00000439338 NBPF6Q5VWK0 638 aa28.11■■■□□ 2.09
UBE2F-212ENST00000439338 NBPF4Q96M43 638 aa28.11■■■□□ 2.09
UBE2F-212ENST00000439338 KNSTRNQ9Y448 316 aa28.11■■■□□ 2.09
UBE2F-212ENST00000439338 USHBP1Q8N6Y0 703 aa28.1■■■□□ 2.09
UBE2F-212ENST00000439338 POLKQ9UBT6 870 aa28.1■■■□□ 2.09
UBE2F-212ENST00000439338 MEGF6O75095 1541 aa28.09■■■□□ 2.09
UBE2F-212ENST00000439338 EZH2Q15910 746 aaKnown RBP28.09■■■□□ 2.09
UBE2F-212ENST00000439338 WASHC2AQ641Q2 1341 aa28.09■■■□□ 2.09
UBE2F-212ENST00000439338 CAMKK2Q96RR4 588 aa28.08■■■□□ 2.09
UBE2F-212ENST00000439338 MORC1Q86VD1 984 aa28.06■■■□□ 2.08
UBE2F-212ENST00000439338 RREB1Q92766 1687 aa28.06■■■□□ 2.08
UBE2F-212ENST00000439338 AMER1Q5JTC6 1135 aaPredicted RBP28.05■■■□□ 2.08
UBE2F-212ENST00000439338 PTF1AQ7RTS3 328 aa28.05■■■□□ 2.08
UBE2F-212ENST00000439338 PARD3Q8TEW0 1356 aa28.05■■■□□ 2.08
UBE2F-212ENST00000439338 SHANK3Q9BYB0 1731 aa28.05■■■□□ 2.08
UBE2F-212ENST00000439338 BCL11BQ9C0K0 894 aaPredicted RBP28.04■■■□□ 2.08
UBE2F-212ENST00000439338 NHSQ6T4R5 1651 aa28.03■■■□□ 2.08
UBE2F-212ENST00000439338 RGPD3A6NKT7 1758 aaPredicted RBP28.01■■■□□ 2.08
UBE2F-212ENST00000439338 RGPD4Q7Z3J3 1758 aa28.01■■■□□ 2.08
UBE2F-212ENST00000439338 NUP188Q5SRE5 1749 aa28.01■■■□□ 2.07
UBE2F-212ENST00000439338 DDX54Q8TDD1 881 aaKnown RBP28.01■■■□□ 2.07
UBE2F-212ENST00000439338 RAPGEF4Q8WZA2 1011 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms