RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 TCP11L2Q8N4U5 519 aa13.1□□□□□ -0.31
AC011228.1-201ENST00000439027 SSH2Q76I76 1423 aa13.1□□□□□ -0.31
AC011228.1-201ENST00000439027 PHRF1Q9P1Y6 1649 aaKnown RBP13.1□□□□□ -0.31
AC011228.1-201ENST00000439027 ROCK2O75116 1388 aaKnown RBP13.09□□□□□ -0.31
AC011228.1-201ENST00000439027 CPDO75976 1380 aa13.09□□□□□ -0.31
AC011228.1-201ENST00000439027 BARGINQ6ZT62 677 aa13.09□□□□□ -0.31
AC011228.1-201ENST00000439027 BRD4O60885 1362 aaPredicted RBP13.08□□□□□ -0.31
AC011228.1-201ENST00000439027 APBA3O96018 575 aa13.08□□□□□ -0.32
AC011228.1-201ENST00000439027 EZH2Q15910 746 aaKnown RBP13.08□□□□□ -0.32
AC011228.1-201ENST00000439027 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.32
AC011228.1-201ENST00000439027 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.32
AC011228.1-201ENST00000439027 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.32
AC011228.1-201ENST00000439027 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
AC011228.1-201ENST00000439027 NRKQ7Z2Y5 1582 aa13.07□□□□□ -0.32
AC011228.1-201ENST00000439027 USP6P35125 1406 aa13.06□□□□□ -0.32
AC011228.1-201ENST00000439027 SOX12O15370 315 aa13.06□□□□□ -0.32
AC011228.1-201ENST00000439027 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
AC011228.1-201ENST00000439027 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
AC011228.1-201ENST00000439027 TOM1L2Q6ZVM7 507 aa13.04□□□□□ -0.32
AC011228.1-201ENST00000439027 CAMKK2Q96RR4 588 aa13.04□□□□□ -0.32
AC011228.1-201ENST00000439027 TTC21BQ7Z4L5 1316 aa13.04□□□□□ -0.32
AC011228.1-201ENST00000439027 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
AC011228.1-201ENST00000439027 CLSPNQ9HAW4 1339 aa13.03□□□□□ -0.32
AC011228.1-201ENST00000439027 AATKQ6ZMQ8 1374 aa13.03□□□□□ -0.32
AC011228.1-201ENST00000439027 COL5A2P05997 1499 aaPredicted RBP13.03□□□□□ -0.32
AC011228.1-201ENST00000439027 TRPM1Q7Z4N2 1603 aa13.02□□□□□ -0.32
AC011228.1-201ENST00000439027 CSB-PGBD3P0DP91 1061 aa13.02□□□□□ -0.33
AC011228.1-201ENST00000439027 KCNH5Q8NCM2 988 aa13.02□□□□□ -0.33
AC011228.1-201ENST00000439027 DISP2A7MBM2 1401 aa13.02□□□□□ -0.33
AC011228.1-201ENST00000439027 CRB1P82279 1406 aa13.02□□□□□ -0.33
AC011228.1-201ENST00000439027 LMO7Q8WWI1 1683 aa13.02□□□□□ -0.33
AC011228.1-201ENST00000439027 TMC1Q8TDI8 760 aa13.01□□□□□ -0.33
AC011228.1-201ENST00000439027 AXIN2Q9Y2T1 843 aa13.01□□□□□ -0.33
AC011228.1-201ENST00000439027 KTN1Q86UP2 1357 aaKnown RBP13.01□□□□□ -0.33
AC011228.1-201ENST00000439027 TTC21AQ8NDW8 1320 aa13□□□□□ -0.33
AC011228.1-201ENST00000439027 DDB1Q16531 1140 aa13□□□□□ -0.33
AC011228.1-201ENST00000439027 NBPF14Q5TI25 921 aa13□□□□□ -0.33
AC011228.1-201ENST00000439027 ARHGEF25Q86VW2 580 aa13□□□□□ -0.33
AC011228.1-201ENST00000439027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13□□□□□ -0.33
AC011228.1-201ENST00000439027 SPDYE1Q8NFV5 336 aaPredicted RBP13□□□□□ -0.33
AC011228.1-201ENST00000439027 SLIT3O75094 1523 aa12.99□□□□□ -0.33
AC011228.1-201ENST00000439027 PARD3Q8TEW0 1356 aa12.99□□□□□ -0.33
AC011228.1-201ENST00000439027 WDR17Q8IZU2 1322 aa12.99□□□□□ -0.33
AC011228.1-201ENST00000439027 C11orf95C9JLR9 678 aaPredicted RBP12.99□□□□□ -0.33
AC011228.1-201ENST00000439027 TNS1Q9HBL0 1735 aaKnown RBP12.99□□□□□ -0.33
AC011228.1-201ENST00000439027 TONSLQ96HA7 1378 aa12.98□□□□□ -0.33
AC011228.1-201ENST00000439027 CPSF1Q10570 1443 aaKnown RBP12.97□□□□□ -0.33
AC011228.1-201ENST00000439027 PIK3C2AO00443 1686 aa12.97□□□□□ -0.33
AC011228.1-201ENST00000439027 HDGFL2Q7Z4V5 671 aaPredicted RBP12.97□□□□□ -0.33
AC011228.1-201ENST00000439027 CDCA7Q9BWT1 371 aaPredicted RBP12.97□□□□□ -0.33
AC011228.1-201ENST00000439027 LRP5O75197 1615 aa12.96□□□□□ -0.33
AC011228.1-201ENST00000439027 ZEB1P37275 1124 aaPredicted RBP12.96□□□□□ -0.33
AC011228.1-201ENST00000439027 NME9Q86XW9 330 aa12.96□□□□□ -0.33
AC011228.1-201ENST00000439027 CARD10Q9BWT7 1032 aa12.96□□□□□ -0.33
AC011228.1-201ENST00000439027 SLC12A5Q9H2X9 1139 aa12.96□□□□□ -0.33
AC011228.1-201ENST00000439027 CLEC11AQ9Y240 323 aa12.96□□□□□ -0.33
AC011228.1-201ENST00000439027 OVOS2A0A0G2JMS6 1433 aa12.96□□□□□ -0.34
AC011228.1-201ENST00000439027 OVOS2A0A0J9YW53 1432 aa12.96□□□□□ -0.34
AC011228.1-201ENST00000439027 OVOS2Q6IE36 1432 aa12.96□□□□□ -0.34
AC011228.1-201ENST00000439027 PIP4P2Q8N4L2 257 aa12.95□□□□□ -0.34
AC011228.1-201ENST00000439027 MARCH10Q8NA82 808 aaPredicted RBP12.95□□□□□ -0.34
AC011228.1-201ENST00000439027 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
AC011228.1-201ENST00000439027 EXOC5O00471 708 aa12.94□□□□□ -0.34
AC011228.1-201ENST00000439027 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
AC011228.1-201ENST00000439027 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
AC011228.1-201ENST00000439027 COL18A1P39060 1754 aa12.94□□□□□ -0.34
AC011228.1-201ENST00000439027 AKAP12Q02952 1782 aa12.94□□□□□ -0.34
AC011228.1-201ENST00000439027 SBNO2Q9Y2G9 1366 aa12.94□□□□□ -0.34
AC011228.1-201ENST00000439027 PARP4Q9UKK3 1724 aaKnown RBP12.93□□□□□ -0.34
AC011228.1-201ENST00000439027 PTF1AQ7RTS3 328 aa12.93□□□□□ -0.34
AC011228.1-201ENST00000439027 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
AC011228.1-201ENST00000439027 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
AC011228.1-201ENST00000439027 USP31Q70CQ4 1352 aa12.92□□□□□ -0.34
AC011228.1-201ENST00000439027 PLSCR1O15162 318 aa12.91□□□□□ -0.34
AC011228.1-201ENST00000439027 NFAT5O94916 1531 aa12.91□□□□□ -0.34
AC011228.1-201ENST00000439027 RGPD5Q99666 1765 aa12.91□□□□□ -0.34
AC011228.1-201ENST00000439027 CCDC7Q96M83 1385 aa12.91□□□□□ -0.34
AC011228.1-201ENST00000439027 ST20-MTHFSA0A0A6YYL1 179 aa12.9□□□□□ -0.34
AC011228.1-201ENST00000439027 SPON1Q9HCB6 807 aa12.9□□□□□ -0.34
AC011228.1-201ENST00000439027 PPP1R1BQ9UD71 204 aaPredicted RBP12.9□□□□□ -0.34
AC011228.1-201ENST00000439027 LRRC37A3O60309 1634 aa12.89□□□□□ -0.35
AC011228.1-201ENST00000439027 ANKRD24Q8TF21 1146 aa12.89□□□□□ -0.35
AC011228.1-201ENST00000439027 PUS7Q96PZ0 661 aaKnown RBP12.89□□□□□ -0.35
AC011228.1-201ENST00000439027 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
AC011228.1-201ENST00000439027 KAT6BQ8WYB5 2073 aa12.89□□□□□ -0.35
AC011228.1-201ENST00000439027 EDC4Q6P2E9 1401 aaKnown RBP12.88□□□□□ -0.35
AC011228.1-201ENST00000439027 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
AC011228.1-201ENST00000439027 MON2Q7Z3U7 1717 aa12.88□□□□□ -0.35
AC011228.1-201ENST00000439027 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
AC011228.1-201ENST00000439027 KCNQ2O43526 872 aa12.88□□□□□ -0.35
AC011228.1-201ENST00000439027 LTV1Q96GA3 475 aaPredicted RBP12.88□□□□□ -0.35
AC011228.1-201ENST00000439027 A0A1W2PP64 1363 aa12.88□□□□□ -0.35
AC011228.1-201ENST00000439027 RREB1Q92766 1687 aa12.88□□□□□ -0.35
AC011228.1-201ENST00000439027 ERBB3P21860 1342 aa12.88□□□□□ -0.35
AC011228.1-201ENST00000439027 IL2RBP14784 551 aa12.87□□□□□ -0.35
AC011228.1-201ENST00000439027 PROM2Q8N271 834 aa12.87□□□□□ -0.35
AC011228.1-201ENST00000439027 ACSBG1Q96GR2 724 aa12.87□□□□□ -0.35
AC011228.1-201ENST00000439027 ANO8Q9HCE9 1232 aaPredicted RBP12.87□□□□□ -0.35
AC011228.1-201ENST00000439027 SBF2Q86WG5 1849 aa12.86□□□□□ -0.35
AC011228.1-201ENST00000439027 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms