RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 ITSN1Q15811 1721 aa12.71□□□□□ -0.37
SCRN1-208ENST00000438497 POLR3AO14802 1390 aaPredicted RBP12.71□□□□□ -0.37
SCRN1-208ENST00000438497 PEAK1Q9H792 1746 aa12.71□□□□□ -0.38
SCRN1-208ENST00000438497 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
SCRN1-208ENST00000438497 USP19O94966 1318 aa12.7□□□□□ -0.38
SCRN1-208ENST00000438497 EXOC5O00471 708 aa12.7□□□□□ -0.38
SCRN1-208ENST00000438497 CDCA7Q9BWT1 371 aaPredicted RBP12.7□□□□□ -0.38
SCRN1-208ENST00000438497 COL5A2P05997 1499 aaPredicted RBP12.7□□□□□ -0.38
SCRN1-208ENST00000438497 NLRP6P59044 892 aa12.69□□□□□ -0.38
SCRN1-208ENST00000438497 STAC3Q96MF2 364 aa12.69□□□□□ -0.38
SCRN1-208ENST00000438497 UTRNP46939 3433 aa12.68□□□□□ -0.38
SCRN1-208ENST00000438497 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
SCRN1-208ENST00000438497 AXIN2Q9Y2T1 843 aa12.67□□□□□ -0.38
SCRN1-208ENST00000438497 AATKQ6ZMQ8 1374 aa12.67□□□□□ -0.38
SCRN1-208ENST00000438497 KLHL34Q8N239 644 aa12.66□□□□□ -0.38
SCRN1-208ENST00000438497 WDR17Q8IZU2 1322 aa12.65□□□□□ -0.38
SCRN1-208ENST00000438497 BCL9O00512 1426 aa12.65□□□□□ -0.38
SCRN1-208ENST00000438497 CSB-PGBD3P0DP91 1061 aa12.65□□□□□ -0.38
SCRN1-208ENST00000438497 SRPK2P78362 688 aaKnown RBP12.65□□□□□ -0.38
SCRN1-208ENST00000438497 CARD10Q9BWT7 1032 aa12.64□□□□□ -0.39
SCRN1-208ENST00000438497 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
SCRN1-208ENST00000438497 LRRC37A3O60309 1634 aa12.63□□□□□ -0.39
SCRN1-208ENST00000438497 KCNA4P22459 653 aa12.63□□□□□ -0.39
SCRN1-208ENST00000438497 SLC16A10Q8TF71 515 aa12.63□□□□□ -0.39
SCRN1-208ENST00000438497 ACSBG1Q96GR2 724 aa12.63□□□□□ -0.39
SCRN1-208ENST00000438497 KAT6BQ8WYB5 2073 aa12.63□□□□□ -0.39
SCRN1-208ENST00000438497 AKAP12Q02952 1782 aa12.62□□□□□ -0.39
SCRN1-208ENST00000438497 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
SCRN1-208ENST00000438497 POLD1P28340 1107 aa12.62□□□□□ -0.39
SCRN1-208ENST00000438497 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
SCRN1-208ENST00000438497 ARHGEF28Q8N1W1 1705 aaKnown RBP12.62□□□□□ -0.39
SCRN1-208ENST00000438497 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
SCRN1-208ENST00000438497 PPIP5K1Q6PFW1 1433 aa12.61□□□□□ -0.39
SCRN1-208ENST00000438497 GRIN3BO60391 1043 aa12.6□□□□□ -0.39
SCRN1-208ENST00000438497 ARHGEF25Q86VW2 580 aa12.6□□□□□ -0.39
SCRN1-208ENST00000438497 TOPAZ1Q8N9V7 1692 aa12.6□□□□□ -0.39
SCRN1-208ENST00000438497 SOX12O15370 315 aa12.59□□□□□ -0.39
SCRN1-208ENST00000438497 ZNF827Q17R98 1081 aa12.59□□□□□ -0.39
SCRN1-208ENST00000438497 KCNH5Q8NCM2 988 aa12.59□□□□□ -0.39
SCRN1-208ENST00000438497 COL18A1P39060 1754 aa12.58□□□□□ -0.39
SCRN1-208ENST00000438497 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.4
SCRN1-208ENST00000438497 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.4
SCRN1-208ENST00000438497 RGPD5Q99666 1765 aa12.58□□□□□ -0.4
SCRN1-208ENST00000438497 CCDC7Q96M83 1385 aa12.56□□□□□ -0.4
SCRN1-208ENST00000438497 USP6P35125 1406 aa12.56□□□□□ -0.4
SCRN1-208ENST00000438497 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
SCRN1-208ENST00000438497 ZNF692Q9BU19 519 aaPredicted RBP12.56□□□□□ -0.4
SCRN1-208ENST00000438497 TFCP2L1Q9NZI6 479 aa12.56□□□□□ -0.4
SCRN1-208ENST00000438497 WNK3Q9BYP7 1800 aa12.55□□□□□ -0.4
SCRN1-208ENST00000438497 YBX3P16989 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
SCRN1-208ENST00000438497 HSPA6P17066 643 aa12.55□□□□□ -0.4
SCRN1-208ENST00000438497 NBPF1Q3BBV0 1214 aa12.55□□□□□ -0.4
SCRN1-208ENST00000438497 GPBP1L1Q9HC44 474 aaPredicted RBP12.55□□□□□ -0.4
SCRN1-208ENST00000438497 SLIT3O75094 1523 aa12.55□□□□□ -0.4
SCRN1-208ENST00000438497 CEP350Q5VT06 3117 aa12.55□□□□□ -0.4
SCRN1-208ENST00000438497 SHANK3Q9BYB0 1731 aa12.54□□□□□ -0.4
SCRN1-208ENST00000438497 SLC27A3Q5K4L6 730 aa12.54□□□□□ -0.4
SCRN1-208ENST00000438497 NLRP2Q9NX02 1062 aa12.54□□□□□ -0.4
SCRN1-208ENST00000438497 TTC21BQ7Z4L5 1316 aa12.54□□□□□ -0.4
SCRN1-208ENST00000438497 CENPJQ9HC77 1338 aaPredicted RBP12.54□□□□□ -0.4
SCRN1-208ENST00000438497 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
SCRN1-208ENST00000438497 IL2RBP14784 551 aa12.53□□□□□ -0.4
SCRN1-208ENST00000438497 PNPLA7Q6ZV29 1317 aa12.53□□□□□ -0.4
SCRN1-208ENST00000438497 NHSQ6T4R5 1651 aa12.52□□□□□ -0.4
SCRN1-208ENST00000438497 MSH5O43196 834 aa12.52□□□□□ -0.41
SCRN1-208ENST00000438497 ATP10DQ9P241 1426 aa12.52□□□□□ -0.41
SCRN1-208ENST00000438497 BTAF1O14981 1849 aa12.51□□□□□ -0.41
SCRN1-208ENST00000438497 KCNQ4P56696 695 aa12.51□□□□□ -0.41
SCRN1-208ENST00000438497 DDX54Q8TDD1 881 aaKnown RBP12.51□□□□□ -0.41
SCRN1-208ENST00000438497 ZNF526Q8TF50 670 aaPredicted RBP12.51□□□□□ -0.41
SCRN1-208ENST00000438497 TNS2Q63HR2 1409 aa12.51□□□□□ -0.41
SCRN1-208ENST00000438497 PAPPAQ13219 1627 aa12.51□□□□□ -0.41
SCRN1-208ENST00000438497 PIK3C2AO00443 1686 aa12.49□□□□□ -0.41
SCRN1-208ENST00000438497 RAB3GAP2Q9H2M9 1393 aa12.49□□□□□ -0.41
SCRN1-208ENST00000438497 TTC21AQ8NDW8 1320 aa12.49□□□□□ -0.41
SCRN1-208ENST00000438497 EVC2Q86UK5 1308 aa12.48□□□□□ -0.41
SCRN1-208ENST00000438497 SYTL4Q96C24 671 aaPredicted RBP12.48□□□□□ -0.41
SCRN1-208ENST00000438497 COL24A1Q17RW2 1714 aa12.48□□□□□ -0.41
SCRN1-208ENST00000438497 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
SCRN1-208ENST00000438497 ADRA2BP18089 450 aa12.47□□□□□ -0.41
SCRN1-208ENST00000438497 PRIM1P49642 420 aaKnown RBP12.47□□□□□ -0.41
SCRN1-208ENST00000438497 COL23A1Q86Y22 540 aaPredicted RBP12.47□□□□□ -0.41
SCRN1-208ENST00000438497 QSER1Q2KHR3 1735 aa12.47□□□□□ -0.41
SCRN1-208ENST00000438497 ERBB3P21860 1342 aa12.46□□□□□ -0.41
SCRN1-208ENST00000438497 ANKRD24Q8TF21 1146 aa12.46□□□□□ -0.41
SCRN1-208ENST00000438497 CD2APQ9Y5K6 639 aa12.46□□□□□ -0.41
SCRN1-208ENST00000438497 KIAA1210Q9ULL0 1709 aa12.45□□□□□ -0.42
SCRN1-208ENST00000438497 MSL1Q68DK7 614 aa12.45□□□□□ -0.42
SCRN1-208ENST00000438497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCRN1-208ENST00000438497 ABCC6O95255 1503 aa12.44□□□□□ -0.42
SCRN1-208ENST00000438497 CCNL1Q9UK58 526 aaPredicted RBP12.44□□□□□ -0.42
SCRN1-208ENST00000438497 GOLGB1Q14789 3259 aaKnown RBP12.44□□□□□ -0.42
SCRN1-208ENST00000438497 KTN1Q86UP2 1357 aaKnown RBP12.43□□□□□ -0.42
SCRN1-208ENST00000438497 QRICH2Q9H0J4 1663 aa12.43□□□□□ -0.42
SCRN1-208ENST00000438497 APLP1P51693 650 aa12.43□□□□□ -0.42
SCRN1-208ENST00000438497 NFAT5O94916 1531 aa12.42□□□□□ -0.42
SCRN1-208ENST00000438497 TUBGCP6Q96RT7 1819 aa12.42□□□□□ -0.42
SCRN1-208ENST00000438497 KIF3CO14782 793 aa12.42□□□□□ -0.42
SCRN1-208ENST00000438497 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
SCRN1-208ENST00000438497 FLAD1Q8NFF5 587 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms