RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 SPATA31A1Q5TZJ5 1347 aa11.11□□□□□ -0.63
VPS50-203ENST00000436177 ZBTB7CA1YPR0 619 aa11.11□□□□□ -0.63
VPS50-203ENST00000436177 PDE3BQ13370 1112 aa11.11□□□□□ -0.63
VPS50-203ENST00000436177 BRWD3Q6RI45 1802 aa11.1□□□□□ -0.63
VPS50-203ENST00000436177 FAM182BQ5T319 152 aa11.1□□□□□ -0.63
VPS50-203ENST00000436177 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
VPS50-203ENST00000436177 BRD4O60885 1362 aaPredicted RBP11.1□□□□□ -0.63
VPS50-203ENST00000436177 EVC2Q86UK5 1308 aa11.09□□□□□ -0.63
VPS50-203ENST00000436177 SSH2Q76I76 1423 aa11.09□□□□□ -0.63
VPS50-203ENST00000436177 TOPAZ1Q8N9V7 1692 aa11.09□□□□□ -0.63
VPS50-203ENST00000436177 ROCK2O75116 1388 aaKnown RBP11.09□□□□□ -0.63
VPS50-203ENST00000436177 FAM196AQ6ZSG2 479 aa11.09□□□□□ -0.63
VPS50-203ENST00000436177 USP19O94966 1318 aa11.09□□□□□ -0.63
VPS50-203ENST00000436177 CPDO75976 1380 aa11.08□□□□□ -0.64
VPS50-203ENST00000436177 PSDA5PKW4 1024 aaPredicted RBP11.08□□□□□ -0.64
VPS50-203ENST00000436177 GCP02774 474 aa11.08□□□□□ -0.64
VPS50-203ENST00000436177 NLRP6P59044 892 aa11.08□□□□□ -0.64
VPS50-203ENST00000436177 EN1Q05925 392 aaPredicted RBP11.08□□□□□ -0.64
VPS50-203ENST00000436177 NEUROD1Q13562 356 aa11.08□□□□□ -0.64
VPS50-203ENST00000436177 TCP11L2Q8N4U5 519 aa11.08□□□□□ -0.64
VPS50-203ENST00000436177 L3MBTL2Q969R5 705 aa11.08□□□□□ -0.64
VPS50-203ENST00000436177 PHRF1Q9P1Y6 1649 aaKnown RBP11.08□□□□□ -0.64
VPS50-203ENST00000436177 CRYBG1Q9Y4K1 1723 aa11.07□□□□□ -0.64
VPS50-203ENST00000436177 BARGINQ6ZT62 677 aa11.07□□□□□ -0.64
VPS50-203ENST00000436177 CABP1Q9NZU7 370 aa11.07□□□□□ -0.64
VPS50-203ENST00000436177 THSD7AQ9UPZ6 1657 aa11.07□□□□□ -0.64
VPS50-203ENST00000436177 NRKQ7Z2Y5 1582 aa11.07□□□□□ -0.64
VPS50-203ENST00000436177 TRIM37O94972 964 aa11.06□□□□□ -0.64
VPS50-203ENST00000436177 LARP1Q6PKG0 1096 aaKnown RBP11.06□□□□□ -0.64
VPS50-203ENST00000436177 THRAP3Q9Y2W1 955 aaKnown RBP11.06□□□□□ -0.64
VPS50-203ENST00000436177 USP6P35125 1406 aa11.06□□□□□ -0.64
VPS50-203ENST00000436177 QRICH2Q9H0J4 1663 aa11.05□□□□□ -0.64
VPS50-203ENST00000436177 DISP2A7MBM2 1401 aa11.05□□□□□ -0.64
VPS50-203ENST00000436177 APBA3O96018 575 aa11.05□□□□□ -0.64
VPS50-203ENST00000436177 RGPD1P0DJD0 1748 aa11.05□□□□□ -0.64
VPS50-203ENST00000436177 TSPYL2Q9H2G4 693 aaPredicted RBP11.05□□□□□ -0.64
VPS50-203ENST00000436177 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
VPS50-203ENST00000436177 C11orf95C9JLR9 678 aaPredicted RBP11.04□□□□□ -0.64
VPS50-203ENST00000436177 R3HDM1Q15032 1099 aaKnown RBP11.04□□□□□ -0.64
VPS50-203ENST00000436177 PROM2Q8N271 834 aa11.04□□□□□ -0.64
VPS50-203ENST00000436177 AATKQ6ZMQ8 1374 aa11.03□□□□□ -0.64
VPS50-203ENST00000436177 CRB1P82279 1406 aa11.03□□□□□ -0.64
VPS50-203ENST00000436177 SOX12O15370 315 aa11.03□□□□□ -0.64
VPS50-203ENST00000436177 TOM1L2Q6ZVM7 507 aa11.03□□□□□ -0.64
VPS50-203ENST00000436177 SIN3AQ96ST3 1273 aa11.03□□□□□ -0.64
VPS50-203ENST00000436177 COL5A2P05997 1499 aaPredicted RBP11.03□□□□□ -0.64
VPS50-203ENST00000436177 CAMTA1Q9Y6Y1 1673 aa11.03□□□□□ -0.64
VPS50-203ENST00000436177 CSB-PGBD3P0DP91 1061 aa11.02□□□□□ -0.65
VPS50-203ENST00000436177 EZH2Q15910 746 aaKnown RBP11.02□□□□□ -0.65
VPS50-203ENST00000436177 NBPF14Q5TI25 921 aa11.02□□□□□ -0.65
VPS50-203ENST00000436177 KCNH5Q8NCM2 988 aa11.02□□□□□ -0.65
VPS50-203ENST00000436177 MS4A3Q96HJ5 214 aa11.02□□□□□ -0.65
VPS50-203ENST00000436177 PELP1Q8IZL8 1130 aaKnown RBP11.01□□□□□ -0.65
VPS50-203ENST00000436177 TTC21AQ8NDW8 1320 aa11.01□□□□□ -0.65
VPS50-203ENST00000436177 LRP5O75197 1615 aa11.01□□□□□ -0.65
VPS50-203ENST00000436177 OVOS2A0A0G2JMS6 1433 aa11.01□□□□□ -0.65
VPS50-203ENST00000436177 OVOS2A0A0J9YW53 1432 aa11.01□□□□□ -0.65
VPS50-203ENST00000436177 OVOS2Q6IE36 1432 aa11.01□□□□□ -0.65
VPS50-203ENST00000436177 TRPM1Q7Z4N2 1603 aa11□□□□□ -0.65
VPS50-203ENST00000436177 DDB1Q16531 1140 aa11□□□□□ -0.65
VPS50-203ENST00000436177 CAMKK2Q96RR4 588 aa11□□□□□ -0.65
VPS50-203ENST00000436177 CARD11Q9BXL7 1154 aa11□□□□□ -0.65
VPS50-203ENST00000436177 LMO7Q8WWI1 1683 aa11□□□□□ -0.65
VPS50-203ENST00000436177 TTC21BQ7Z4L5 1316 aa11□□□□□ -0.65
VPS50-203ENST00000436177 KTN1Q86UP2 1357 aaKnown RBP11□□□□□ -0.65
VPS50-203ENST00000436177 TONSLQ96HA7 1378 aa11□□□□□ -0.65
VPS50-203ENST00000436177 CPSF1Q10570 1443 aaKnown RBP11□□□□□ -0.65
VPS50-203ENST00000436177 SLIT3O75094 1523 aa10.99□□□□□ -0.65
VPS50-203ENST00000436177 CDCA7Q9BWT1 371 aaPredicted RBP10.99□□□□□ -0.65
VPS50-203ENST00000436177 WDR17Q8IZU2 1322 aa10.99□□□□□ -0.65
VPS50-203ENST00000436177 TNS1Q9HBL0 1735 aaKnown RBP10.98□□□□□ -0.65
VPS50-203ENST00000436177 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
VPS50-203ENST00000436177 HDGFL2Q7Z4V5 671 aaPredicted RBP10.98□□□□□ -0.65
VPS50-203ENST00000436177 TMC1Q8TDI8 760 aa10.98□□□□□ -0.65
VPS50-203ENST00000436177 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.65
VPS50-203ENST00000436177 PIK3C2AO00443 1686 aa10.96□□□□□ -0.65
VPS50-203ENST00000436177 SBNO2Q9Y2G9 1366 aa10.96□□□□□ -0.65
VPS50-203ENST00000436177 ARHGEF25Q86VW2 580 aa10.96□□□□□ -0.65
VPS50-203ENST00000436177 MIER1Q8N108 512 aa10.96□□□□□ -0.65
VPS50-203ENST00000436177 TERF2IPQ9NYB0 399 aa10.96□□□□□ -0.65
VPS50-203ENST00000436177 PPP1R1BQ9UD71 204 aaPredicted RBP10.96□□□□□ -0.65
VPS50-203ENST00000436177 OTUD5Q96G74 571 aa10.95□□□□□ -0.66
VPS50-203ENST00000436177 CARD10Q9BWT7 1032 aa10.95□□□□□ -0.66
VPS50-203ENST00000436177 CCDC7Q96M83 1385 aa10.94□□□□□ -0.66
VPS50-203ENST00000436177 BCL11BQ9C0K0 894 aaPredicted RBP10.94□□□□□ -0.66
VPS50-203ENST00000436177 NLRP2Q9NX02 1062 aa10.94□□□□□ -0.66
VPS50-203ENST00000436177 AXIN2Q9Y2T1 843 aa10.94□□□□□ -0.66
VPS50-203ENST00000436177 PARP4Q9UKK3 1724 aaKnown RBP10.94□□□□□ -0.66
VPS50-203ENST00000436177 EXOC5O00471 708 aa10.93□□□□□ -0.66
VPS50-203ENST00000436177 SPON1Q9HCB6 807 aa10.93□□□□□ -0.66
VPS50-203ENST00000436177 LRRC37A3O60309 1634 aa10.92□□□□□ -0.66
VPS50-203ENST00000436177 NME9Q86XW9 330 aa10.92□□□□□ -0.66
VPS50-203ENST00000436177 ABCC6O95255 1503 aa10.92□□□□□ -0.66
VPS50-203ENST00000436177 EDC4Q6P2E9 1401 aaKnown RBP10.92□□□□□ -0.66
VPS50-203ENST00000436177 NFAT5O94916 1531 aa10.91□□□□□ -0.66
VPS50-203ENST00000436177 ATMINO43313 823 aaPredicted RBP10.91□□□□□ -0.66
VPS50-203ENST00000436177 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
VPS50-203ENST00000436177 MARCH10Q8NA82 808 aaPredicted RBP10.91□□□□□ -0.66
VPS50-203ENST00000436177 METRNQ9UJH8 293 aa10.91□□□□□ -0.66
VPS50-203ENST00000436177 TNS2Q63HR2 1409 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms