RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 LAPTM4AQ15012 233 aa7.95□□□□□ -1.14
HMGB1P45-201ENST00000435986 TBC1D9Q6ZT07 1266 aa7.95□□□□□ -1.14
HMGB1P45-201ENST00000435986 UCN2Q96RP3 112 aa7.95□□□□□ -1.14
HMGB1P45-201ENST00000435986 BRD1O95696 1058 aa7.94□□□□□ -1.14
HMGB1P45-201ENST00000435986 AGERQ15109 404 aa7.94□□□□□ -1.14
HMGB1P45-201ENST00000435986 DZIP3Q86Y13 1208 aaKnown RBP7.94□□□□□ -1.14
HMGB1P45-201ENST00000435986 RNF135Q8IUD6 432 aa7.94□□□□□ -1.14
HMGB1P45-201ENST00000435986 TRIM52Q96A61 297 aa7.94□□□□□ -1.14
HMGB1P45-201ENST00000435986 UNC93B1Q9H1C4 597 aa7.94□□□□□ -1.14
HMGB1P45-201ENST00000435986 PKD2L1Q9P0L9 805 aa7.94□□□□□ -1.14
HMGB1P45-201ENST00000435986 KCNA1Q09470 495 aa7.93□□□□□ -1.14
HMGB1P45-201ENST00000435986 TRIM32Q13049 653 aa7.93□□□□□ -1.14
HMGB1P45-201ENST00000435986 MAP7D1Q3KQU3 841 aa7.93□□□□□ -1.14
HMGB1P45-201ENST00000435986 BPHLQ86WA6 291 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P45-201ENST00000435986 CCDC125Q86Z20 511 aa7.93□□□□□ -1.14
HMGB1P45-201ENST00000435986 PLEKHM2Q8IWE5 1019 aa7.93□□□□□ -1.14
HMGB1P45-201ENST00000435986 CEP126Q9P2H0 1117 aa7.93□□□□□ -1.14
HMGB1P45-201ENST00000435986 ATP5J2-PTCD1G3V325 749 aa7.92□□□□□ -1.14
HMGB1P45-201ENST00000435986 TNFRSF10AO00220 468 aa7.92□□□□□ -1.14
HMGB1P45-201ENST00000435986 ZBTB24O43167 697 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P45-201ENST00000435986 RNF20Q5VTR2 975 aa7.92□□□□□ -1.14
HMGB1P45-201ENST00000435986 PTCRAQ6ISU1 281 aaPredicted RBP7.92□□□□□ -1.14
HMGB1P45-201ENST00000435986 LARP1Q6PKG0 1096 aaKnown RBP7.92□□□□□ -1.14
HMGB1P45-201ENST00000435986 RBM19Q9Y4C8 960 aaKnown RBP7.92□□□□□ -1.14
HMGB1P45-201ENST00000435986 USP17L3A6NCW0 530 aa7.91□□□□□ -1.14
HMGB1P45-201ENST00000435986 USP17L4A6NCW7 530 aa7.91□□□□□ -1.14
HMGB1P45-201ENST00000435986 USP17L5A8MUK1 530 aa7.91□□□□□ -1.14
HMGB1P45-201ENST00000435986 CD2BP2O95400 341 aaKnown RBP7.91□□□□□ -1.14
HMGB1P45-201ENST00000435986 RANGAP1P46060 587 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P45-201ENST00000435986 SRPK2P78362 688 aaKnown RBP7.91□□□□□ -1.14
HMGB1P45-201ENST00000435986 ELOAQ14241 798 aaKnown RBP7.91□□□□□ -1.14
HMGB1P45-201ENST00000435986 USP17L2Q6R6M4 530 aa7.91□□□□□ -1.14
HMGB1P45-201ENST00000435986 USP17L1Q7RTZ2 530 aa7.91□□□□□ -1.14
HMGB1P45-201ENST00000435986 ADAM32Q8TC27 787 aa7.91□□□□□ -1.14
HMGB1P45-201ENST00000435986 CDV3Q9UKY7 258 aaKnown RBP7.91□□□□□ -1.14
HMGB1P45-201ENST00000435986 EML3Q32P44 896 aa7.9□□□□□ -1.14
HMGB1P45-201ENST00000435986 CDCA8Q53HL2 280 aa7.9□□□□□ -1.14
HMGB1P45-201ENST00000435986 TRIM50Q86XT4 487 aa7.9□□□□□ -1.14
HMGB1P45-201ENST00000435986 SIRT1Q96EB6 747 aa7.9□□□□□ -1.14
HMGB1P45-201ENST00000435986 MAGEB6P1A0A0J9YX57 407 aa7.89□□□□□ -1.15
HMGB1P45-201ENST00000435986 ATP1A2P50993 1020 aa7.89□□□□□ -1.15
HMGB1P45-201ENST00000435986 SKOR1P84550 965 aa7.89□□□□□ -1.15
HMGB1P45-201ENST00000435986 TRAF7Q6Q0C0 670 aa7.89□□□□□ -1.15
HMGB1P45-201ENST00000435986 FAM196BA6NMK8 535 aa7.88□□□□□ -1.15
HMGB1P45-201ENST00000435986 NBPF20Q3BBV1 942 aa7.88□□□□□ -1.15
HMGB1P45-201ENST00000435986 TMCO4Q5TGY1 634 aa7.88□□□□□ -1.15
HMGB1P45-201ENST00000435986 SH3BP5LQ7L8J4 393 aa7.88□□□□□ -1.15
HMGB1P45-201ENST00000435986 PLPP7Q8NBV4 271 aa7.88□□□□□ -1.15
HMGB1P45-201ENST00000435986 SLC10A4Q96EP9 437 aa7.88□□□□□ -1.15
HMGB1P45-201ENST00000435986 CARD14Q9BXL6 1004 aa7.88□□□□□ -1.15
HMGB1P45-201ENST00000435986 MKRN1Q9UHC7 482 aaKnown RBP7.88□□□□□ -1.15
HMGB1P45-201ENST00000435986 WNT7AO00755 349 aa7.87□□□□□ -1.15
HMGB1P45-201ENST00000435986 RASA1P20936 1047 aa7.87□□□□□ -1.15
HMGB1P45-201ENST00000435986 FOXC1Q12948 553 aa7.87□□□□□ -1.15
HMGB1P45-201ENST00000435986 TOR4AQ9NXH8 423 aa7.87□□□□□ -1.15
HMGB1P45-201ENST00000435986 NOD1Q9Y239 953 aa7.87□□□□□ -1.15
HMGB1P45-201ENST00000435986 PIK3CDO00329 1044 aa7.86□□□□□ -1.15
HMGB1P45-201ENST00000435986 WNT7BP56706 349 aa7.86□□□□□ -1.15
HMGB1P45-201ENST00000435986 NCOA4Q13772 614 aa7.86□□□□□ -1.15
HMGB1P45-201ENST00000435986 KANK4Q5T7N3 995 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P45-201ENST00000435986 ZNF511Q8NB15 262 aa7.86□□□□□ -1.15
HMGB1P45-201ENST00000435986 FAM200AQ8TCP9 573 aa7.86□□□□□ -1.15
HMGB1P45-201ENST00000435986 BAP1Q92560 729 aa7.86□□□□□ -1.15
HMGB1P45-201ENST00000435986 ESF1Q9H501 851 aaKnown RBP7.86□□□□□ -1.15
HMGB1P45-201ENST00000435986 NOVA2Q9UNW9 492 aaKnown RBP7.86□□□□□ -1.15
HMGB1P45-201ENST00000435986 DOLKQ9UPQ8 538 aa7.86□□□□□ -1.15
HMGB1P45-201ENST00000435986 GZF1Q9H116 711 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P45-201ENST00000435986 SEPT12Q8IYM1 358 aa7.84□□□□□ -1.15
HMGB1P45-201ENST00000435986 DEPDC4Q8N2C3 294 aa7.84□□□□□ -1.15
HMGB1P45-201ENST00000435986 MRGPRX2Q96LB1 330 aa7.84□□□□□ -1.15
HMGB1P45-201ENST00000435986 CDCA7Q9BWT1 371 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P45-201ENST00000435986 USP17L15C9J2P7 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP17L10C9JJH3 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP17L13C9JLJ4 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP17L12C9JPN9 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP17L11C9JVI0 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP17L21D6R901 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP17L18D6R9N7 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP17L22D6RA61 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP17L17D6RBQ6 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP17L19D6RCP7 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP17L20D6RJB6 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 SH3BP2P78314 561 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP17L24Q0WX57 530 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 USP4Q13107 963 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 LINC01559Q495D7 138 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 RC3H1Q5TC82 1133 aaKnown RBP7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 SH3RF1Q7Z6J0 888 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 PHTF2Q8N3S3 785 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 FAM174AQ8TBP5 190 aa7.83□□□□□ -1.16
HMGB1P45-201ENST00000435986 DGAT1O75907 488 aa7.82□□□□□ -1.16
HMGB1P45-201ENST00000435986 ERFEQ4G0M1 354 aa7.82□□□□□ -1.16
HMGB1P45-201ENST00000435986 CCER1Q8TC90 406 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P45-201ENST00000435986 OCSTAMPQ9BR26 566 aa7.82□□□□□ -1.16
HMGB1P45-201ENST00000435986 MTMR7Q9Y216 660 aa7.82□□□□□ -1.16
HMGB1P45-201ENST00000435986 FAM187AA6NFU0 413 aa7.81□□□□□ -1.16
HMGB1P45-201ENST00000435986 TMEM88BA6NKF7 163 aa7.81□□□□□ -1.16
HMGB1P45-201ENST00000435986 POTECB2RU33 542 aa7.81□□□□□ -1.16
HMGB1P45-201ENST00000435986 MYCP01106 439 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P45-201ENST00000435986 MYT1Q01538 1121 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms