RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 ARHGEF25Q86VW2 580 aa21.1■□□□□ 0.97
RPUSD3-208ENST00000433972 DDB1Q16531 1140 aa21.09■□□□□ 0.97
RPUSD3-208ENST00000433972 NBPF14Q5TI25 921 aa21.09■□□□□ 0.97
RPUSD3-208ENST00000433972 PARP4Q9UKK3 1724 aaKnown RBP21.09■□□□□ 0.97
RPUSD3-208ENST00000433972 PCGF6Q9BYE7 350 aa21.08■□□□□ 0.97
RPUSD3-208ENST00000433972 SLC24A1O60721 1099 aa21.07■□□□□ 0.96
RPUSD3-208ENST00000433972 CSB-PGBD3P0DP91 1061 aa21.07■□□□□ 0.96
RPUSD3-208ENST00000433972 HDGFL2Q7Z4V5 671 aaPredicted RBP21.07■□□□□ 0.96
RPUSD3-208ENST00000433972 ABCC6O95255 1503 aa21.06■□□□□ 0.96
RPUSD3-208ENST00000433972 SOX12O15370 315 aa21.05■□□□□ 0.96
RPUSD3-208ENST00000433972 PUS7Q96PZ0 661 aaKnown RBP21.05■□□□□ 0.96
RPUSD3-208ENST00000433972 CARD10Q9BWT7 1032 aa21.05■□□□□ 0.96
RPUSD3-208ENST00000433972 AKAP12Q02952 1782 aa21.05■□□□□ 0.96
RPUSD3-208ENST00000433972 AXIN2Q9Y2T1 843 aa21.04■□□□□ 0.96
RPUSD3-208ENST00000433972 USP31Q70CQ4 1352 aa21.03■□□□□ 0.96
RPUSD3-208ENST00000433972 CCDC7Q96M83 1385 aa21.03■□□□□ 0.96
RPUSD3-208ENST00000433972 TMC1Q8TDI8 760 aa21.03■□□□□ 0.96
RPUSD3-208ENST00000433972 TERF2IPQ9NYB0 399 aa21.03■□□□□ 0.96
RPUSD3-208ENST00000433972 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.01■□□□□ 0.95
RPUSD3-208ENST00000433972 LRRC37A3O60309 1634 aa21■□□□□ 0.95
RPUSD3-208ENST00000433972 COL18A1P39060 1754 aa21■□□□□ 0.95
RPUSD3-208ENST00000433972 NFAT5O94916 1531 aa21■□□□□ 0.95
RPUSD3-208ENST00000433972 PLSCR1O15162 318 aa21■□□□□ 0.95
RPUSD3-208ENST00000433972 BCL11BQ9C0K0 894 aaPredicted RBP21■□□□□ 0.95
RPUSD3-208ENST00000433972 BCL9O00512 1426 aa21■□□□□ 0.95
RPUSD3-208ENST00000433972 EDC4Q6P2E9 1401 aaKnown RBP21■□□□□ 0.95
RPUSD3-208ENST00000433972 NINLQ9Y2I6 1382 aa20.99■□□□□ 0.95
RPUSD3-208ENST00000433972 EXOC5O00471 708 aa20.99■□□□□ 0.95
RPUSD3-208ENST00000433972 RREB1Q92766 1687 aa20.99■□□□□ 0.95
RPUSD3-208ENST00000433972 MON2Q7Z3U7 1717 aa20.98■□□□□ 0.95
RPUSD3-208ENST00000433972 PEAK1Q9H792 1746 aa20.95■□□□□ 0.94
RPUSD3-208ENST00000433972 CD163L1Q9NR16 1453 aa20.95■□□□□ 0.94
RPUSD3-208ENST00000433972 NME9Q86XW9 330 aa20.95■□□□□ 0.94
RPUSD3-208ENST00000433972 MARCH10Q8NA82 808 aaPredicted RBP20.95■□□□□ 0.94
RPUSD3-208ENST00000433972 SLC12A5Q9H2X9 1139 aa20.95■□□□□ 0.94
RPUSD3-208ENST00000433972 ERBB3P21860 1342 aa20.95■□□□□ 0.94
RPUSD3-208ENST00000433972 USP54Q70EL1 1684 aa20.94■□□□□ 0.94
RPUSD3-208ENST00000433972 NUP188Q5SRE5 1749 aa20.94■□□□□ 0.94
RPUSD3-208ENST00000433972 RGPD3A6NKT7 1758 aaPredicted RBP20.94■□□□□ 0.94
RPUSD3-208ENST00000433972 RGPD4Q7Z3J3 1758 aa20.94■□□□□ 0.94
RPUSD3-208ENST00000433972 A0A1W2PP64 1363 aa20.93■□□□□ 0.94
RPUSD3-208ENST00000433972 TNS2Q63HR2 1409 aa20.93■□□□□ 0.94
RPUSD3-208ENST00000433972 SPON1Q9HCB6 807 aa20.92■□□□□ 0.94
RPUSD3-208ENST00000433972 NLRP2Q9NX02 1062 aa20.92■□□□□ 0.94
RPUSD3-208ENST00000433972 WNK3Q9BYP7 1800 aa20.92■□□□□ 0.94
RPUSD3-208ENST00000433972 ST20-MTHFSA0A0A6YYL1 179 aa20.89■□□□□ 0.93
RPUSD3-208ENST00000433972 IL2RBP14784 551 aa20.89■□□□□ 0.93
RPUSD3-208ENST00000433972 ANKRD24Q8TF21 1146 aa20.89■□□□□ 0.93
RPUSD3-208ENST00000433972 PPP1R1BQ9UD71 204 aaPredicted RBP20.89■□□□□ 0.93
RPUSD3-208ENST00000433972 COG3Q96JB2 828 aa20.88■□□□□ 0.93
RPUSD3-208ENST00000433972 TESK2Q96S53 571 aa20.88■□□□□ 0.93
RPUSD3-208ENST00000433972 KCNQ2O43526 872 aa20.87■□□□□ 0.93
RPUSD3-208ENST00000433972 RGPD5Q99666 1765 aa20.85■□□□□ 0.93
RPUSD3-208ENST00000433972 TMF1P82094 1093 aa20.85■□□□□ 0.93
RPUSD3-208ENST00000433972 IP6K1Q92551 441 aa20.85■□□□□ 0.93
RPUSD3-208ENST00000433972 ANKRD36BQ8N2N9 1353 aa20.85■□□□□ 0.93
RPUSD3-208ENST00000433972 SBF2Q86WG5 1849 aa20.84■□□□□ 0.93
RPUSD3-208ENST00000433972 DCAF8L1A6NGE4 600 aa20.84■□□□□ 0.93
RPUSD3-208ENST00000433972 CDCA8Q53HL2 280 aa20.84■□□□□ 0.93
RPUSD3-208ENST00000433972 STK32BQ9NY57 414 aa20.84■□□□□ 0.93
RPUSD3-208ENST00000433972 TXNRD1Q16881 649 aa20.83■□□□□ 0.93
RPUSD3-208ENST00000433972 PTF1AQ7RTS3 328 aa20.82■□□□□ 0.92
RPUSD3-208ENST00000433972 ANO8Q9HCE9 1232 aaPredicted RBP20.82■□□□□ 0.92
RPUSD3-208ENST00000433972 LTN1O94822 1766 aa20.82■□□□□ 0.92
RPUSD3-208ENST00000433972 AMPHP49418 695 aa20.8■□□□□ 0.92
RPUSD3-208ENST00000433972 PROM2Q8N271 834 aa20.8■□□□□ 0.92
RPUSD3-208ENST00000433972 USP47Q96K76 1375 aa20.8■□□□□ 0.92
RPUSD3-208ENST00000433972 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
RPUSD3-208ENST00000433972 NHSQ6T4R5 1651 aa20.78■□□□□ 0.92
RPUSD3-208ENST00000433972 FAM208AQ9UK61 1670 aaKnown RBP20.78■□□□□ 0.92
RPUSD3-208ENST00000433972 RTL1A6NKG5 1358 aa20.78■□□□□ 0.92
RPUSD3-208ENST00000433972 SLC15A2Q16348 729 aa20.78■□□□□ 0.92
RPUSD3-208ENST00000433972 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
RPUSD3-208ENST00000433972 ACSBG1Q96GR2 724 aa20.78■□□□□ 0.92
RPUSD3-208ENST00000433972 LTV1Q96GA3 475 aaPredicted RBP20.77■□□□□ 0.92
RPUSD3-208ENST00000433972 TIMELESSQ9UNS1 1208 aa20.77■□□□□ 0.92
RPUSD3-208ENST00000433972 MAP3K19Q56UN5 1328 aa20.77■□□□□ 0.91
RPUSD3-208ENST00000433972 HOXC9P31274 260 aa20.76■□□□□ 0.91
RPUSD3-208ENST00000433972 SMG6Q86US8 1419 aaKnown RBP20.75■□□□□ 0.91
RPUSD3-208ENST00000433972 DDX54Q8TDD1 881 aaKnown RBP20.73■□□□□ 0.91
RPUSD3-208ENST00000433972 ZBTB7AO95365 584 aa20.72■□□□□ 0.91
RPUSD3-208ENST00000433972 MTFR1LQ9H019 292 aa20.72■□□□□ 0.91
RPUSD3-208ENST00000433972 CGNL1Q0VF96 1302 aa20.72■□□□□ 0.91
RPUSD3-208ENST00000433972 CASZ1Q86V15 1759 aa20.72■□□□□ 0.91
RPUSD3-208ENST00000433972 FYB1O15117 783 aa20.71■□□□□ 0.91
RPUSD3-208ENST00000433972 SLC27A3Q5K4L6 730 aa20.71■□□□□ 0.91
RPUSD3-208ENST00000433972 KIF24Q5T7B8 1368 aa20.71■□□□□ 0.91
RPUSD3-208ENST00000433972 ZCRB1Q8TBF4 217 aaKnown RBP20.69■□□□□ 0.9
RPUSD3-208ENST00000433972 GGNBP2Q9H3C7 697 aa20.69■□□□□ 0.9
RPUSD3-208ENST00000433972 RAPGEF4Q8WZA2 1011 aa20.68■□□□□ 0.9
RPUSD3-208ENST00000433972 YY1P25490 414 aa20.67■□□□□ 0.9
RPUSD3-208ENST00000433972 HMGB2P26583 209 aaKnown RBP20.67■□□□□ 0.9
RPUSD3-208ENST00000433972 RRS1Q15050 365 aaKnown RBP20.67■□□□□ 0.9
RPUSD3-208ENST00000433972 SYTL4Q96C24 671 aaPredicted RBP20.67■□□□□ 0.9
RPUSD3-208ENST00000433972 PDGFDQ9GZP0 370 aaPredicted RBP20.67■□□□□ 0.9
RPUSD3-208ENST00000433972 ATF5Q9Y2D1 282 aaPredicted RBP20.67■□□□□ 0.9
RPUSD3-208ENST00000433972 PTGER2P43116 358 aa20.66■□□□□ 0.9
RPUSD3-208ENST00000433972 FLT4P35916 1363 aa20.66■□□□□ 0.9
RPUSD3-208ENST00000433972 INSRP06213 1382 aa20.65■□□□□ 0.9
RPUSD3-208ENST00000433972 BTAF1O14981 1849 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms