RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 PELP1Q8IZL8 1130 aaKnown RBP23.3■■□□□ 1.32
NUP50-209ENST00000432340 PLEKHG3A1L390 1219 aa23.29■■□□□ 1.32
NUP50-209ENST00000432340 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
NUP50-209ENST00000432340 SLC16A10Q8TF71 515 aa23.29■■□□□ 1.32
NUP50-209ENST00000432340 STAC3Q96MF2 364 aa23.29■■□□□ 1.32
NUP50-209ENST00000432340 PEAK1Q9H792 1746 aa23.28■■□□□ 1.32
NUP50-209ENST00000432340 PTF1AQ7RTS3 328 aa23.28■■□□□ 1.32
NUP50-209ENST00000432340 MARCH10Q8NA82 808 aaPredicted RBP23.28■■□□□ 1.32
NUP50-209ENST00000432340 LMO7Q8WWI1 1683 aa23.28■■□□□ 1.32
NUP50-209ENST00000432340 BRD4O60885 1362 aaPredicted RBP23.27■■□□□ 1.32
NUP50-209ENST00000432340 ADGRB1O14514 1584 aa23.27■■□□□ 1.32
NUP50-209ENST00000432340 KLHL34Q8N239 644 aa23.27■■□□□ 1.32
NUP50-209ENST00000432340 ZBTB7CA1YPR0 619 aa23.26■■□□□ 1.31
NUP50-209ENST00000432340 EXOC5O00471 708 aa23.25■■□□□ 1.31
NUP50-209ENST00000432340 HSPA6P17066 643 aa23.25■■□□□ 1.31
NUP50-209ENST00000432340 CDK19Q9BWU1 502 aa23.25■■□□□ 1.31
NUP50-209ENST00000432340 WDR17Q8IZU2 1322 aa23.24■■□□□ 1.31
NUP50-209ENST00000432340 ITSN1Q15811 1721 aa23.24■■□□□ 1.31
NUP50-209ENST00000432340 GPBP1L1Q9HC44 474 aaPredicted RBP23.22■■□□□ 1.31
NUP50-209ENST00000432340 LRRC37A3O60309 1634 aa23.21■■□□□ 1.31
NUP50-209ENST00000432340 CSB-PGBD3P0DP91 1061 aa23.19■■□□□ 1.3
NUP50-209ENST00000432340 CARD10Q9BWT7 1032 aa23.18■■□□□ 1.3
NUP50-209ENST00000432340 NLRP6P59044 892 aa23.17■■□□□ 1.3
NUP50-209ENST00000432340 SBF2Q86WG5 1849 aa23.14■■□□□ 1.29
NUP50-209ENST00000432340 ATP10DQ9P241 1426 aa23.14■■□□□ 1.29
NUP50-209ENST00000432340 CEP350Q5VT06 3117 aa23.14■■□□□ 1.29
NUP50-209ENST00000432340 CCDC7Q96M83 1385 aa23.14■■□□□ 1.29
NUP50-209ENST00000432340 KDM2AQ9Y2K7 1162 aa23.13■■□□□ 1.29
NUP50-209ENST00000432340 SLC27A3Q5K4L6 730 aa23.12■■□□□ 1.29
NUP50-209ENST00000432340 KCNH5Q8NCM2 988 aa23.12■■□□□ 1.29
NUP50-209ENST00000432340 DCAF11Q8TEB1 546 aa23.12■■□□□ 1.29
NUP50-209ENST00000432340 SHANK3Q9BYB0 1731 aa23.11■■□□□ 1.29
NUP50-209ENST00000432340 SRPK2P78362 688 aaKnown RBP23.1■■□□□ 1.29
NUP50-209ENST00000432340 ZNF827Q17R98 1081 aa23.1■■□□□ 1.29
NUP50-209ENST00000432340 TNS2Q63HR2 1409 aa23.08■■□□□ 1.29
NUP50-209ENST00000432340 NLGN2Q8NFZ4 835 aa23.08■■□□□ 1.29
NUP50-209ENST00000432340 TFCP2L1Q9NZI6 479 aa23.08■■□□□ 1.29
NUP50-209ENST00000432340 PPIP5K1Q6PFW1 1433 aa23.08■■□□□ 1.28
NUP50-209ENST00000432340 ACSBG1Q96GR2 724 aa23.07■■□□□ 1.28
NUP50-209ENST00000432340 AXIN2Q9Y2T1 843 aa23.07■■□□□ 1.28
NUP50-209ENST00000432340 USP6P35125 1406 aa23.07■■□□□ 1.28
NUP50-209ENST00000432340 YBX3P16989 372 aaKnown RBP eCLIP23.06■■□□□ 1.28
NUP50-209ENST00000432340 AKT1S1Q96B36 256 aa23.06■■□□□ 1.28
NUP50-209ENST00000432340 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
NUP50-209ENST00000432340 APLP1P51693 650 aa23.05■■□□□ 1.28
NUP50-209ENST00000432340 ARHGEF25Q86VW2 580 aa23.05■■□□□ 1.28
NUP50-209ENST00000432340 SLIT3O75094 1523 aa23.04■■□□□ 1.28
NUP50-209ENST00000432340 HMGB2P26583 209 aaKnown RBP23.03■■□□□ 1.28
NUP50-209ENST00000432340 TOPAZ1Q8N9V7 1692 aa23.03■■□□□ 1.28
NUP50-209ENST00000432340 AKAP12Q02952 1782 aa23.01■■□□□ 1.27
NUP50-209ENST00000432340 PAPPAQ13219 1627 aa23.01■■□□□ 1.27
NUP50-209ENST00000432340 LRRC4BQ9NT99 713 aa23.01■■□□□ 1.27
NUP50-209ENST00000432340 PNPLA7Q6ZV29 1317 aa23.01■■□□□ 1.27
NUP50-209ENST00000432340 ZNF526Q8TF50 670 aaPredicted RBP22.99■■□□□ 1.27
NUP50-209ENST00000432340 CD2APQ9Y5K6 639 aa22.99■■□□□ 1.27
NUP50-209ENST00000432340 NHSQ6T4R5 1651 aa22.98■■□□□ 1.27
NUP50-209ENST00000432340 IL2RBP14784 551 aa22.98■■□□□ 1.27
NUP50-209ENST00000432340 CABP1Q9NZU7 370 aa22.97■■□□□ 1.27
NUP50-209ENST00000432340 ADCY9O60503 1353 aa22.97■■□□□ 1.27
NUP50-209ENST00000432340 ABCC6O95255 1503 aa22.97■■□□□ 1.27
NUP50-209ENST00000432340 ARHGEF28Q8N1W1 1705 aaKnown RBP22.96■■□□□ 1.27
NUP50-209ENST00000432340 ZNF692Q9BU19 519 aaPredicted RBP22.96■■□□□ 1.27
NUP50-209ENST00000432340 MSH5O43196 834 aa22.95■■□□□ 1.26
NUP50-209ENST00000432340 CABP2Q9NPB3 220 aa22.95■■□□□ 1.26
NUP50-209ENST00000432340 NLRP2Q9NX02 1062 aa22.95■■□□□ 1.26
NUP50-209ENST00000432340 TRPM1Q7Z4N2 1603 aa22.93■■□□□ 1.26
NUP50-209ENST00000432340 WNK3Q9BYP7 1800 aa22.92■■□□□ 1.26
NUP50-209ENST00000432340 CENPJQ9HC77 1338 aaPredicted RBP22.92■■□□□ 1.26
NUP50-209ENST00000432340 SOX12O15370 315 aa22.92■■□□□ 1.26
NUP50-209ENST00000432340 TTC21AQ8NDW8 1320 aa22.91■■□□□ 1.26
NUP50-209ENST00000432340 COL18A1P39060 1754 aa22.89■■□□□ 1.26
NUP50-209ENST00000432340 ERBB3P21860 1342 aa22.88■■□□□ 1.25
NUP50-209ENST00000432340 TTC21BQ7Z4L5 1316 aa22.88■■□□□ 1.25
NUP50-209ENST00000432340 KIF3CO14782 793 aa22.88■■□□□ 1.25
NUP50-209ENST00000432340 TOMM70O94826 608 aa22.88■■□□□ 1.25
NUP50-209ENST00000432340 FLAD1Q8NFF5 587 aa22.88■■□□□ 1.25
NUP50-209ENST00000432340 DNAJC5GQ8N7S2 189 aa22.86■■□□□ 1.25
NUP50-209ENST00000432340 SYTL4Q96C24 671 aaPredicted RBP22.86■■□□□ 1.25
NUP50-209ENST00000432340 PRELPP51888 382 aa22.85■■□□□ 1.25
NUP50-209ENST00000432340 CCNL1Q9UK58 526 aaPredicted RBP22.85■■□□□ 1.25
NUP50-209ENST00000432340 GOLGB1Q14789 3259 aaKnown RBP22.84■■□□□ 1.25
NUP50-209ENST00000432340 TNS4Q8IZW8 715 aa22.84■■□□□ 1.25
NUP50-209ENST00000432340 COL24A1Q17RW2 1714 aa22.84■■□□□ 1.25
NUP50-209ENST00000432340 QSER1Q2KHR3 1735 aa22.84■■□□□ 1.25
NUP50-209ENST00000432340 CAPN15O75808 1086 aa22.83■■□□□ 1.25
NUP50-209ENST00000432340 COL23A1Q86Y22 540 aaPredicted RBP22.83■■□□□ 1.25
NUP50-209ENST00000432340 DDX54Q8TDD1 881 aaKnown RBP22.83■■□□□ 1.25
NUP50-209ENST00000432340 EVC2Q86UK5 1308 aa22.82■■□□□ 1.24
NUP50-209ENST00000432340 BTAF1O14981 1849 aa22.81■■□□□ 1.24
NUP50-209ENST00000432340 ANKRD36BQ8N2N9 1353 aa22.8■■□□□ 1.24
NUP50-209ENST00000432340 MSL1Q68DK7 614 aa22.8■■□□□ 1.24
NUP50-209ENST00000432340 PRIM1P49642 420 aaKnown RBP22.79■■□□□ 1.24
NUP50-209ENST00000432340 COL13A1Q5TAT6 717 aaPredicted RBP22.79■■□□□ 1.24
NUP50-209ENST00000432340 PIK3C2AO00443 1686 aa22.78■■□□□ 1.24
NUP50-209ENST00000432340 KCNQ4P56696 695 aa22.78■■□□□ 1.24
NUP50-209ENST00000432340 ANKRD24Q8TF21 1146 aa22.78■■□□□ 1.24
NUP50-209ENST00000432340 JMYQ8N9B5 988 aa22.77■■□□□ 1.24
NUP50-209ENST00000432340 KLRG1Q96E93 195 aa22.77■■□□□ 1.24
NUP50-209ENST00000432340 QRICH2Q9H0J4 1663 aa22.77■■□□□ 1.24
NUP50-209ENST00000432340 IGSF1Q8N6C5 1336 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms