RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 SEC24BO95487 1268 aa14.25□□□□□ -0.13
CLDN4-202ENST00000431918 SLC4A2P04920 1241 aa14.25□□□□□ -0.13
CLDN4-202ENST00000431918 EIF4A2Q14240 407 aaKnown RBP14.25□□□□□ -0.13
CLDN4-202ENST00000431918 C8orf58Q8NAV2 365 aa14.25□□□□□ -0.13
CLDN4-202ENST00000431918 NRXN1Q9ULB1 1477 aa14.24□□□□□ -0.13
CLDN4-202ENST00000431918 FKBP5Q13451 457 aaPredicted RBP14.24□□□□□ -0.13
CLDN4-202ENST00000431918 USHBP1Q8N6Y0 703 aa14.24□□□□□ -0.13
CLDN4-202ENST00000431918 IFT57Q9NWB7 429 aa14.24□□□□□ -0.13
CLDN4-202ENST00000431918 NEXMIFQ5QGS0 1516 aa14.24□□□□□ -0.13
CLDN4-202ENST00000431918 ADGRB1O14514 1584 aa14.24□□□□□ -0.13
CLDN4-202ENST00000431918 SETBP1Q9Y6X0 1596 aa14.24□□□□□ -0.13
CLDN4-202ENST00000431918 C22orf23Q9BZE7 217 aa14.24□□□□□ -0.13
CLDN4-202ENST00000431918 IL13P35225 146 aa14.23□□□□□ -0.13
CLDN4-202ENST00000431918 IL16Q14005 1332 aa14.23□□□□□ -0.13
CLDN4-202ENST00000431918 KIAA1210Q9ULL0 1709 aa14.22□□□□□ -0.13
CLDN4-202ENST00000431918 CFAP44Q96MT7 982 aa14.22□□□□□ -0.13
CLDN4-202ENST00000431918 ALDH1L2Q3SY69 923 aa14.22□□□□□ -0.13
CLDN4-202ENST00000431918 FOXO3O43524 673 aa14.22□□□□□ -0.13
CLDN4-202ENST00000431918 CASC1Q6TDU7 716 aa14.22□□□□□ -0.13
CLDN4-202ENST00000431918 TMEM2Q9UHN6 1383 aa14.21□□□□□ -0.13
CLDN4-202ENST00000431918 GZF1Q9H116 711 aaPredicted RBP14.21□□□□□ -0.13
CLDN4-202ENST00000431918 ZFYVE9O95405 1425 aa14.21□□□□□ -0.13
CLDN4-202ENST00000431918 VAMP4O75379 141 aa14.21□□□□□ -0.13
CLDN4-202ENST00000431918 FRAT2O75474 233 aaPredicted RBP14.21□□□□□ -0.13
CLDN4-202ENST00000431918 OS9Q13438 667 aaPredicted RBP14.21□□□□□ -0.13
CLDN4-202ENST00000431918 A2ML1A8K2U0 1454 aa14.21□□□□□ -0.13
CLDN4-202ENST00000431918 CSB-PGBD3P0DP91 1061 aa14.21□□□□□ -0.14
CLDN4-202ENST00000431918 CHD1LQ86WJ1 897 aa14.2□□□□□ -0.14
CLDN4-202ENST00000431918 ANKLE2Q86XL3 938 aa14.2□□□□□ -0.14
CLDN4-202ENST00000431918 KCNA6P17658 529 aa14.2□□□□□ -0.14
CLDN4-202ENST00000431918 PIK3C2BO00750 1634 aa14.2□□□□□ -0.14
CLDN4-202ENST00000431918 PRR36Q9H6K5 1346 aa14.2□□□□□ -0.14
CLDN4-202ENST00000431918 ALKQ9UM73 1620 aa14.19□□□□□ -0.14
CLDN4-202ENST00000431918 TEFQ10587 303 aa14.19□□□□□ -0.14
CLDN4-202ENST00000431918 EDC4Q6P2E9 1401 aaKnown RBP14.19□□□□□ -0.14
CLDN4-202ENST00000431918 F6X3S4 739 aa14.19□□□□□ -0.14
CLDN4-202ENST00000431918 GAS2L2Q8NHY3 880 aa14.19□□□□□ -0.14
CLDN4-202ENST00000431918 HMMRO75330 724 aa14.19□□□□□ -0.14
CLDN4-202ENST00000431918 ZNF428Q96B54 188 aa14.19□□□□□ -0.14
CLDN4-202ENST00000431918 ROBO2Q9HCK4 1378 aa14.18□□□□□ -0.14
CLDN4-202ENST00000431918 USP35Q9P2H5 1018 aa14.18□□□□□ -0.14
CLDN4-202ENST00000431918 PPLO60437 1756 aa14.18□□□□□ -0.14
CLDN4-202ENST00000431918 BRPF3Q9ULD4 1205 aa14.17□□□□□ -0.14
CLDN4-202ENST00000431918 MAP3K19Q56UN5 1328 aa14.17□□□□□ -0.14
CLDN4-202ENST00000431918 A0A0G2JS52 829 aa14.17□□□□□ -0.14
CLDN4-202ENST00000431918 MRPL50Q8N5N7 158 aaKnown RBP14.17□□□□□ -0.14
CLDN4-202ENST00000431918 TRIM6-TRIM34B2RNG4 842 aa14.17□□□□□ -0.14
CLDN4-202ENST00000431918 PTPRMP28827 1452 aa14.17□□□□□ -0.14
CLDN4-202ENST00000431918 RIMBP3CA6NJZ7 1639 aa14.17□□□□□ -0.14
CLDN4-202ENST00000431918 RIMBP3BA6NNM3 1639 aa14.17□□□□□ -0.14
CLDN4-202ENST00000431918 RIMBP3Q9UFD9 1639 aa14.17□□□□□ -0.14
CLDN4-202ENST00000431918 MYOM1P52179 1685 aa14.17□□□□□ -0.14
CLDN4-202ENST00000431918 PHF23Q9BUL5 403 aaPredicted RBP14.16□□□□□ -0.14
CLDN4-202ENST00000431918 ZBTB40Q9NUA8 1239 aa14.16□□□□□ -0.14
CLDN4-202ENST00000431918 PHF8Q9UPP1 1060 aa14.15□□□□□ -0.14
CLDN4-202ENST00000431918 PROSER2Q86WR7 435 aaPredicted RBP14.15□□□□□ -0.14
CLDN4-202ENST00000431918 GCC1Q96CN9 775 aa14.15□□□□□ -0.14
CLDN4-202ENST00000431918 TPRNQ4KMQ1 711 aa14.14□□□□□ -0.15
CLDN4-202ENST00000431918 SMARCA5O60264 1052 aaPredicted RBP14.14□□□□□ -0.15
CLDN4-202ENST00000431918 MTHFSDQ2M296 383 aaKnown RBP14.14□□□□□ -0.15
CLDN4-202ENST00000431918 C1orf141Q5JVX7 400 aa14.14□□□□□ -0.15
CLDN4-202ENST00000431918 CLTCQ00610 1675 aaKnown RBP14.14□□□□□ -0.15
CLDN4-202ENST00000431918 NCLP19338 710 aaKnown RBP14.14□□□□□ -0.15
CLDN4-202ENST00000431918 RILPL2Q969X0 211 aa14.14□□□□□ -0.15
CLDN4-202ENST00000431918 HDAC1Q13547 482 aaPredicted RBP14.13□□□□□ -0.15
CLDN4-202ENST00000431918 GSE1Q14687 1217 aa14.13□□□□□ -0.15
CLDN4-202ENST00000431918 NOL8Q76FK4 1167 aaKnown RBP14.13□□□□□ -0.15
CLDN4-202ENST00000431918 EYA1Q99502 592 aa14.13□□□□□ -0.15
CLDN4-202ENST00000431918 HDGFL1Q5TGJ6 251 aa14.13□□□□□ -0.15
CLDN4-202ENST00000431918 TBX22Q9Y458 520 aa14.13□□□□□ -0.15
CLDN4-202ENST00000431918 ZMYND15Q9H091 742 aa14.12□□□□□ -0.15
CLDN4-202ENST00000431918 A0A0U1RQG5 324 aaPredicted RBP14.12□□□□□ -0.15
CLDN4-202ENST00000431918 PREX1Q8TCU6 1659 aa14.12□□□□□ -0.15
CLDN4-202ENST00000431918 SIGLEC1Q9BZZ2 1709 aa14.12□□□□□ -0.15
CLDN4-202ENST00000431918 NEURL4Q96JN8 1562 aa14.12□□□□□ -0.15
CLDN4-202ENST00000431918 GNAT3A8MTJ3 354 aa14.12□□□□□ -0.15
CLDN4-202ENST00000431918 ZC3H6P61129 1189 aaKnown RBP14.12□□□□□ -0.15
CLDN4-202ENST00000431918 CCDC30Q5VVM6 783 aa14.11□□□□□ -0.15
CLDN4-202ENST00000431918 ZC3H13Q5T200 1668 aaKnown RBP14.11□□□□□ -0.15
CLDN4-202ENST00000431918 ARHGEF40Q8TER5 1519 aa14.11□□□□□ -0.15
CLDN4-202ENST00000431918 ZNF530Q6P9A1 599 aaPredicted RBP14.11□□□□□ -0.15
CLDN4-202ENST00000431918 NLRP2Q9NX02 1062 aa14.11□□□□□ -0.15
CLDN4-202ENST00000431918 MEIS3Q99687 375 aa14.1□□□□□ -0.15
CLDN4-202ENST00000431918 EXOC6BQ9Y2D4 811 aa14.1□□□□□ -0.15
CLDN4-202ENST00000431918 PLEKHG3A1L390 1219 aa14.1□□□□□ -0.15
CLDN4-202ENST00000431918 TBC1D2Q9BYX2 928 aa14.1□□□□□ -0.15
CLDN4-202ENST00000431918 ZBTB7BO15156 539 aaPredicted RBP14.09□□□□□ -0.15
CLDN4-202ENST00000431918 ATP7BP35670 1465 aa14.09□□□□□ -0.15
CLDN4-202ENST00000431918 RICTORQ6R327 1708 aa14.09□□□□□ -0.15
CLDN4-202ENST00000431918 SMC5Q8IY18 1101 aa14.09□□□□□ -0.15
CLDN4-202ENST00000431918 DIP2BQ9P265 1576 aa14.09□□□□□ -0.15
CLDN4-202ENST00000431918 CDC45O75419 566 aa14.09□□□□□ -0.15
CLDN4-202ENST00000431918 NUCB1Q02818 461 aa14.09□□□□□ -0.15
CLDN4-202ENST00000431918 AIMP1Q12904 312 aaKnown RBP14.09□□□□□ -0.15
CLDN4-202ENST00000431918 TBC1D32Q96NH3 1257 aa14.09□□□□□ -0.15
CLDN4-202ENST00000431918 MYO5BQ9ULV0 1848 aa14.09□□□□□ -0.15
CLDN4-202ENST00000431918 TTC21AQ8NDW8 1320 aa14.09□□□□□ -0.15
CLDN4-202ENST00000431918 TMEM131LA2VDJ0 1609 aa14.09□□□□□ -0.15
CLDN4-202ENST00000431918 ARHGEF28Q8N1W1 1705 aaKnown RBP14.08□□□□□ -0.16
CLDN4-202ENST00000431918 ARHGAP45Q92619 1136 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms