RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 NME9Q86XW9 330 aa20.29■□□□□ 0.84
SMARCE1-205ENST00000431889 ZNF692Q9BU19 519 aaPredicted RBP20.29■□□□□ 0.84
SMARCE1-205ENST00000431889 RREB1Q92766 1687 aa20.28■□□□□ 0.84
SMARCE1-205ENST00000431889 MON2Q7Z3U7 1717 aa20.28■□□□□ 0.84
SMARCE1-205ENST00000431889 WNK3Q9BYP7 1800 aa20.28■□□□□ 0.84
SMARCE1-205ENST00000431889 TONSLQ96HA7 1378 aa20.28■□□□□ 0.84
SMARCE1-205ENST00000431889 DDB1Q16531 1140 aa20.27■□□□□ 0.84
SMARCE1-205ENST00000431889 SLC12A5Q9H2X9 1139 aa20.27■□□□□ 0.84
SMARCE1-205ENST00000431889 WDR17Q8IZU2 1322 aa20.26■□□□□ 0.83
SMARCE1-205ENST00000431889 PEAK1Q9H792 1746 aa20.26■□□□□ 0.83
SMARCE1-205ENST00000431889 SBF2Q86WG5 1849 aa20.26■□□□□ 0.83
SMARCE1-205ENST00000431889 CD163L1Q9NR16 1453 aa20.25■□□□□ 0.83
SMARCE1-205ENST00000431889 NFAT5O94916 1531 aa20.25■□□□□ 0.83
SMARCE1-205ENST00000431889 TTC21AQ8NDW8 1320 aa20.25■□□□□ 0.83
SMARCE1-205ENST00000431889 KCNH5Q8NCM2 988 aa20.24■□□□□ 0.83
SMARCE1-205ENST00000431889 MARCH10Q8NA82 808 aaPredicted RBP20.23■□□□□ 0.83
SMARCE1-205ENST00000431889 OVOS2A0A0G2JMS6 1433 aa20.22■□□□□ 0.83
SMARCE1-205ENST00000431889 OVOS2A0A0J9YW53 1432 aa20.22■□□□□ 0.83
SMARCE1-205ENST00000431889 OVOS2Q6IE36 1432 aa20.22■□□□□ 0.83
SMARCE1-205ENST00000431889 LTN1O94822 1766 aa20.22■□□□□ 0.83
SMARCE1-205ENST00000431889 SBNO2Q9Y2G9 1366 aa20.21■□□□□ 0.83
SMARCE1-205ENST00000431889 CARD10Q9BWT7 1032 aa20.19■□□□□ 0.82
SMARCE1-205ENST00000431889 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
SMARCE1-205ENST00000431889 A0A1W2PP64 1363 aa20.18■□□□□ 0.82
SMARCE1-205ENST00000431889 PARD3Q8TEW0 1356 aa20.18■□□□□ 0.82
SMARCE1-205ENST00000431889 ST20-MTHFSA0A0A6YYL1 179 aa20.17■□□□□ 0.82
SMARCE1-205ENST00000431889 FBLN1P23142 703 aa20.17■□□□□ 0.82
SMARCE1-205ENST00000431889 NBPF14Q5TI25 921 aa20.17■□□□□ 0.82
SMARCE1-205ENST00000431889 NLRP2Q9NX02 1062 aa20.17■□□□□ 0.82
SMARCE1-205ENST00000431889 LTV1Q96GA3 475 aaPredicted RBP20.16■□□□□ 0.82
SMARCE1-205ENST00000431889 ACSBG1Q96GR2 724 aa20.16■□□□□ 0.82
SMARCE1-205ENST00000431889 PDGFDQ9GZP0 370 aaPredicted RBP20.16■□□□□ 0.82
SMARCE1-205ENST00000431889 ANO8Q9HCE9 1232 aaPredicted RBP20.16■□□□□ 0.82
SMARCE1-205ENST00000431889 EXOC5O00471 708 aa20.15■□□□□ 0.82
SMARCE1-205ENST00000431889 KCNQ2O43526 872 aa20.15■□□□□ 0.82
SMARCE1-205ENST00000431889 USP31Q70CQ4 1352 aa20.14■□□□□ 0.81
SMARCE1-205ENST00000431889 PROM2Q8N271 834 aa20.13■□□□□ 0.81
SMARCE1-205ENST00000431889 ANKRD24Q8TF21 1146 aa20.13■□□□□ 0.81
SMARCE1-205ENST00000431889 BCL11BQ9C0K0 894 aaPredicted RBP20.13■□□□□ 0.81
SMARCE1-205ENST00000431889 TESK2Q96S53 571 aa20.12■□□□□ 0.81
SMARCE1-205ENST00000431889 EDC4Q6P2E9 1401 aaKnown RBP20.12■□□□□ 0.81
SMARCE1-205ENST00000431889 ERBB3P21860 1342 aa20.12■□□□□ 0.81
SMARCE1-205ENST00000431889 USP54Q70EL1 1684 aa20.12■□□□□ 0.81
SMARCE1-205ENST00000431889 TERF2IPQ9NYB0 399 aa20.12■□□□□ 0.81
SMARCE1-205ENST00000431889 KAT6BQ8WYB5 2073 aa20.11■□□□□ 0.81
SMARCE1-205ENST00000431889 CDCA7Q9BWT1 371 aaPredicted RBP20.11■□□□□ 0.81
SMARCE1-205ENST00000431889 CCDC7Q96M83 1385 aa20.09■□□□□ 0.81
SMARCE1-205ENST00000431889 PLSCR1O15162 318 aa20.09■□□□□ 0.81
SMARCE1-205ENST00000431889 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
SMARCE1-205ENST00000431889 TNS2Q63HR2 1409 aa20.09■□□□□ 0.81
SMARCE1-205ENST00000431889 RGPD3A6NKT7 1758 aaPredicted RBP20.08■□□□□ 0.8
SMARCE1-205ENST00000431889 RGPD2P0DJD1 1756 aa20.08■□□□□ 0.8
SMARCE1-205ENST00000431889 RGPD4Q7Z3J3 1758 aa20.08■□□□□ 0.8
SMARCE1-205ENST00000431889 PPP1R1BQ9UD71 204 aaPredicted RBP20.08■□□□□ 0.8
SMARCE1-205ENST00000431889 C11orf95C9JLR9 678 aaPredicted RBP20.07■□□□□ 0.8
SMARCE1-205ENST00000431889 ZBTB7AO95365 584 aa20.07■□□□□ 0.8
SMARCE1-205ENST00000431889 IL2RBP14784 551 aa20.07■□□□□ 0.8
SMARCE1-205ENST00000431889 TXNRD1Q16881 649 aa20.06■□□□□ 0.8
SMARCE1-205ENST00000431889 SPON1Q9HCB6 807 aa20.06■□□□□ 0.8
SMARCE1-205ENST00000431889 ABCC6O95255 1503 aa20.05■□□□□ 0.8
SMARCE1-205ENST00000431889 DDX54Q8TDD1 881 aaKnown RBP20.04■□□□□ 0.8
SMARCE1-205ENST00000431889 NHSQ6T4R5 1651 aa20.04■□□□□ 0.8
SMARCE1-205ENST00000431889 CASZ1Q86V15 1759 aa20.04■□□□□ 0.8
SMARCE1-205ENST00000431889 COG3Q96JB2 828 aa20.04■□□□□ 0.8
SMARCE1-205ENST00000431889 ATF5Q9Y2D1 282 aaPredicted RBP20.04■□□□□ 0.8
SMARCE1-205ENST00000431889 MAP3K19Q56UN5 1328 aa20.04■□□□□ 0.8
SMARCE1-205ENST00000431889 RRS1Q15050 365 aaKnown RBP20.03■□□□□ 0.8
SMARCE1-205ENST00000431889 IP6K1Q92551 441 aa20.03■□□□□ 0.8
SMARCE1-205ENST00000431889 GGNBP2Q9H3C7 697 aa20.03■□□□□ 0.8
SMARCE1-205ENST00000431889 BTAF1O14981 1849 aa20.03■□□□□ 0.8
SMARCE1-205ENST00000431889 USP47Q96K76 1375 aa20.02■□□□□ 0.8
SMARCE1-205ENST00000431889 BCL9O00512 1426 aa20.01■□□□□ 0.79
SMARCE1-205ENST00000431889 AMPHP49418 695 aa20.01■□□□□ 0.79
SMARCE1-205ENST00000431889 HOXC9P31274 260 aa20■□□□□ 0.79
SMARCE1-205ENST00000431889 KCNQ4P56696 695 aa20■□□□□ 0.79
SMARCE1-205ENST00000431889 USHBP1Q8N6Y0 703 aa20■□□□□ 0.79
SMARCE1-205ENST00000431889 PUS7Q96PZ0 661 aaKnown RBP20■□□□□ 0.79
SMARCE1-205ENST00000431889 STK32BQ9NY57 414 aa20■□□□□ 0.79
SMARCE1-205ENST00000431889 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
SMARCE1-205ENST00000431889 MYOM1P52179 1685 aa19.98■□□□□ 0.79
SMARCE1-205ENST00000431889 TMF1P82094 1093 aa19.98■□□□□ 0.79
SMARCE1-205ENST00000431889 SLC15A2Q16348 729 aa19.98■□□□□ 0.79
SMARCE1-205ENST00000431889 SYTL4Q96C24 671 aaPredicted RBP19.98■□□□□ 0.79
SMARCE1-205ENST00000431889 ANKRD36BQ8N2N9 1353 aa19.97■□□□□ 0.79
SMARCE1-205ENST00000431889 UTRNP46939 3433 aa19.97■□□□□ 0.79
SMARCE1-205ENST00000431889 FYB1O15117 783 aa19.96■□□□□ 0.79
SMARCE1-205ENST00000431889 NINLQ9Y2I6 1382 aa19.96■□□□□ 0.79
SMARCE1-205ENST00000431889 LRRC4BQ9NT99 713 aa19.95■□□□□ 0.78
SMARCE1-205ENST00000431889 FAM208AQ9UK61 1670 aaKnown RBP19.95■□□□□ 0.78
SMARCE1-205ENST00000431889 DOT1LQ8TEK3 1739 aa19.94■□□□□ 0.78
SMARCE1-205ENST00000431889 SHANK3Q9BYB0 1731 aa19.94■□□□□ 0.78
SMARCE1-205ENST00000431889 MEGF6O75095 1541 aa19.94■□□□□ 0.78
SMARCE1-205ENST00000431889 PTGER2P43116 358 aa19.94■□□□□ 0.78
SMARCE1-205ENST00000431889 ZNF827Q17R98 1081 aa19.94■□□□□ 0.78
SMARCE1-205ENST00000431889 KIF20BQ96Q89 1820 aa19.94■□□□□ 0.78
SMARCE1-205ENST00000431889 NBPF6Q5VWK0 638 aa19.93■□□□□ 0.78
SMARCE1-205ENST00000431889 NBPF4Q96M43 638 aa19.93■□□□□ 0.78
SMARCE1-205ENST00000431889 POLR3GLQ9BT43 218 aa19.93■□□□□ 0.78
SMARCE1-205ENST00000431889 PRIM1P49642 420 aaKnown RBP19.92■□□□□ 0.78
SMARCE1-205ENST00000431889 HSP90AB2PQ58FF8 381 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms