RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 GABBR2O75899 941 aa13.54□□□□□ -0.24
CDC42-IT1-201ENST00000431803 CHRNA2Q15822 529 aa13.54□□□□□ -0.24
CDC42-IT1-201ENST00000431803 NUTM2GQ5VZR2 741 aa13.54□□□□□ -0.24
CDC42-IT1-201ENST00000431803 ZBTB47Q9UFB7 747 aaPredicted RBP13.54□□□□□ -0.24
CDC42-IT1-201ENST00000431803 SPATA31A1Q5TZJ5 1347 aa13.54□□□□□ -0.24
CDC42-IT1-201ENST00000431803 A0A0G2JS52 829 aa13.53□□□□□ -0.24
CDC42-IT1-201ENST00000431803 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
CDC42-IT1-201ENST00000431803 MYT1Q01538 1121 aa13.53□□□□□ -0.24
CDC42-IT1-201ENST00000431803 DEFB132Q7Z7B7 95 aa13.53□□□□□ -0.24
CDC42-IT1-201ENST00000431803 ABTB2Q8N961 1025 aa13.53□□□□□ -0.24
CDC42-IT1-201ENST00000431803 USP6P35125 1406 aa13.53□□□□□ -0.24
CDC42-IT1-201ENST00000431803 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
CDC42-IT1-201ENST00000431803 ROCK2O75116 1388 aaKnown RBP13.52□□□□□ -0.25
CDC42-IT1-201ENST00000431803 SSH2Q76I76 1423 aa13.52□□□□□ -0.25
CDC42-IT1-201ENST00000431803 CAMTA1Q9Y6Y1 1673 aa13.52□□□□□ -0.25
CDC42-IT1-201ENST00000431803 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
CDC42-IT1-201ENST00000431803 CABP1Q9NZU7 370 aa13.51□□□□□ -0.25
CDC42-IT1-201ENST00000431803 EVC2Q86UK5 1308 aa13.5□□□□□ -0.25
CDC42-IT1-201ENST00000431803 NEUROD1Q13562 356 aa13.5□□□□□ -0.25
CDC42-IT1-201ENST00000431803 NLRP13Q86W25 1043 aa13.5□□□□□ -0.25
CDC42-IT1-201ENST00000431803 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
CDC42-IT1-201ENST00000431803 STRN4Q9NRL3 753 aa13.5□□□□□ -0.25
CDC42-IT1-201ENST00000431803 RGPD1P0DJD0 1748 aa13.5□□□□□ -0.25
CDC42-IT1-201ENST00000431803 PIK3C2AO00443 1686 aa13.5□□□□□ -0.25
CDC42-IT1-201ENST00000431803 SLIT3O75094 1523 aa13.49□□□□□ -0.25
CDC42-IT1-201ENST00000431803 GCP02774 474 aa13.49□□□□□ -0.25
CDC42-IT1-201ENST00000431803 DISP2A7MBM2 1401 aa13.48□□□□□ -0.25
CDC42-IT1-201ENST00000431803 TNS1Q9HBL0 1735 aaKnown RBP13.48□□□□□ -0.25
CDC42-IT1-201ENST00000431803 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
CDC42-IT1-201ENST00000431803 BARGINQ6ZT62 677 aa13.48□□□□□ -0.25
CDC42-IT1-201ENST00000431803 COL5A2P05997 1499 aaPredicted RBP13.48□□□□□ -0.25
CDC42-IT1-201ENST00000431803 SBNO2Q9Y2G9 1366 aa13.47□□□□□ -0.25
CDC42-IT1-201ENST00000431803 BAG6P46379 1132 aa13.47□□□□□ -0.25
CDC42-IT1-201ENST00000431803 LARP1Q6PKG0 1096 aaKnown RBP13.47□□□□□ -0.25
CDC42-IT1-201ENST00000431803 AKAP12Q02952 1782 aa13.46□□□□□ -0.25
CDC42-IT1-201ENST00000431803 RASEFQ8IZ41 740 aa13.46□□□□□ -0.25
CDC42-IT1-201ENST00000431803 CPSF1Q10570 1443 aaKnown RBP13.46□□□□□ -0.26
CDC42-IT1-201ENST00000431803 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
CDC42-IT1-201ENST00000431803 EVA1CP58658 441 aa13.45□□□□□ -0.26
CDC42-IT1-201ENST00000431803 NLRP6P59044 892 aa13.45□□□□□ -0.26
CDC42-IT1-201ENST00000431803 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
CDC42-IT1-201ENST00000431803 USP35Q9P2H5 1018 aa13.45□□□□□ -0.26
CDC42-IT1-201ENST00000431803 TCP11L2Q8N4U5 519 aa13.44□□□□□ -0.26
CDC42-IT1-201ENST00000431803 THRAP3Q9Y2W1 955 aaKnown RBP13.44□□□□□ -0.26
CDC42-IT1-201ENST00000431803 PARP4Q9UKK3 1724 aaKnown RBP13.44□□□□□ -0.26
CDC42-IT1-201ENST00000431803 COL18A1P39060 1754 aa13.43□□□□□ -0.26
CDC42-IT1-201ENST00000431803 CLCN6P51797 869 aa13.43□□□□□ -0.26
CDC42-IT1-201ENST00000431803 CRB1P82279 1406 aa13.43□□□□□ -0.26
CDC42-IT1-201ENST00000431803 FAM196AQ6ZSG2 479 aa13.43□□□□□ -0.26
CDC42-IT1-201ENST00000431803 LRP5O75197 1615 aa13.42□□□□□ -0.26
CDC42-IT1-201ENST00000431803 TTC21BQ7Z4L5 1316 aa13.42□□□□□ -0.26
CDC42-IT1-201ENST00000431803 MON2Q7Z3U7 1717 aa13.42□□□□□ -0.26
CDC42-IT1-201ENST00000431803 NUBP1P53384 320 aa13.42□□□□□ -0.26
CDC42-IT1-201ENST00000431803 EN1Q05925 392 aaPredicted RBP13.42□□□□□ -0.26
CDC42-IT1-201ENST00000431803 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
CDC42-IT1-201ENST00000431803 TTC21AQ8NDW8 1320 aa13.41□□□□□ -0.26
CDC42-IT1-201ENST00000431803 NFAT5O94916 1531 aa13.41□□□□□ -0.26
CDC42-IT1-201ENST00000431803 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
CDC42-IT1-201ENST00000431803 CD163L1Q9NR16 1453 aa13.41□□□□□ -0.26
CDC42-IT1-201ENST00000431803 TRIM37O94972 964 aa13.4□□□□□ -0.26
CDC42-IT1-201ENST00000431803 PDE3BQ13370 1112 aa13.4□□□□□ -0.26
CDC42-IT1-201ENST00000431803 KTN1Q86UP2 1357 aaKnown RBP13.4□□□□□ -0.26
CDC42-IT1-201ENST00000431803 PARD3Q8TEW0 1356 aa13.4□□□□□ -0.26
CDC42-IT1-201ENST00000431803 TONSLQ96HA7 1378 aa13.4□□□□□ -0.26
CDC42-IT1-201ENST00000431803 USP54Q70EL1 1684 aa13.4□□□□□ -0.26
CDC42-IT1-201ENST00000431803 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
CDC42-IT1-201ENST00000431803 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
CDC42-IT1-201ENST00000431803 KCNH5Q8NCM2 988 aa13.39□□□□□ -0.27
CDC42-IT1-201ENST00000431803 CAMKK2Q96RR4 588 aa13.39□□□□□ -0.27
CDC42-IT1-201ENST00000431803 AXIN2Q9Y2T1 843 aa13.39□□□□□ -0.27
CDC42-IT1-201ENST00000431803 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
CDC42-IT1-201ENST00000431803 ABCC6O95255 1503 aa13.39□□□□□ -0.27
CDC42-IT1-201ENST00000431803 PSDA5PKW4 1024 aaPredicted RBP13.38□□□□□ -0.27
CDC42-IT1-201ENST00000431803 EZH2Q15910 746 aaKnown RBP13.38□□□□□ -0.27
CDC42-IT1-201ENST00000431803 WNK3Q9BYP7 1800 aa13.38□□□□□ -0.27
CDC42-IT1-201ENST00000431803 WDR17Q8IZU2 1322 aa13.38□□□□□ -0.27
CDC42-IT1-201ENST00000431803 RREB1Q92766 1687 aa13.37□□□□□ -0.27
CDC42-IT1-201ENST00000431803 USP31Q70CQ4 1352 aa13.37□□□□□ -0.27
CDC42-IT1-201ENST00000431803 ZBTB7CA1YPR0 619 aa13.37□□□□□ -0.27
CDC42-IT1-201ENST00000431803 APBA3O96018 575 aa13.36□□□□□ -0.27
CDC42-IT1-201ENST00000431803 OVOS2A0A0G2JMS6 1433 aa13.36□□□□□ -0.27
CDC42-IT1-201ENST00000431803 OVOS2A0A0J9YW53 1432 aa13.36□□□□□ -0.27
CDC42-IT1-201ENST00000431803 OVOS2Q6IE36 1432 aa13.36□□□□□ -0.27
CDC42-IT1-201ENST00000431803 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
CDC42-IT1-201ENST00000431803 GALR2O43603 387 aaPredicted RBP13.35□□□□□ -0.27
CDC42-IT1-201ENST00000431803 TOM1L2Q6ZVM7 507 aa13.35□□□□□ -0.27
CDC42-IT1-201ENST00000431803 PUS7Q96PZ0 661 aaKnown RBP13.35□□□□□ -0.27
CDC42-IT1-201ENST00000431803 RGPD5Q99666 1765 aa13.35□□□□□ -0.27
CDC42-IT1-201ENST00000431803 NUP188Q5SRE5 1749 aa13.34□□□□□ -0.27
CDC42-IT1-201ENST00000431803 EDC4Q6P2E9 1401 aaKnown RBP13.34□□□□□ -0.27
CDC42-IT1-201ENST00000431803 SOX12O15370 315 aa13.34□□□□□ -0.27
CDC42-IT1-201ENST00000431803 R3HDM1Q15032 1099 aaKnown RBP13.34□□□□□ -0.27
CDC42-IT1-201ENST00000431803 IFNLR1Q8IU57 520 aaPredicted RBP13.34□□□□□ -0.27
CDC42-IT1-201ENST00000431803 CARD10Q9BWT7 1032 aa13.34□□□□□ -0.27
CDC42-IT1-201ENST00000431803 A0A1W2PP64 1363 aa13.33□□□□□ -0.27
CDC42-IT1-201ENST00000431803 RGPD3A6NKT7 1758 aaPredicted RBP13.33□□□□□ -0.28
CDC42-IT1-201ENST00000431803 RGPD4Q7Z3J3 1758 aa13.33□□□□□ -0.28
CDC42-IT1-201ENST00000431803 BCL9O00512 1426 aa13.33□□□□□ -0.28
CDC42-IT1-201ENST00000431803 DDB1Q16531 1140 aa13.33□□□□□ -0.28
CDC42-IT1-201ENST00000431803 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms