RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 CARD11Q9BXL7 1154 aa19.81■□□□□ 0.76
SEC13-211ENST00000431352 WDR17Q8IZU2 1322 aa19.8■□□□□ 0.76
SEC13-211ENST00000431352 TTC21AQ8NDW8 1320 aa19.8■□□□□ 0.76
SEC13-211ENST00000431352 DDB1Q16531 1140 aa19.8■□□□□ 0.76
SEC13-211ENST00000431352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.8■□□□□ 0.76
SEC13-211ENST00000431352 KCNH5Q8NCM2 988 aa19.8■□□□□ 0.76
SEC13-211ENST00000431352 WNK3Q9BYP7 1800 aa19.79■□□□□ 0.76
SEC13-211ENST00000431352 ARHGEF25Q86VW2 580 aa19.79■□□□□ 0.76
SEC13-211ENST00000431352 NFAT5O94916 1531 aa19.79■□□□□ 0.76
SEC13-211ENST00000431352 TONSLQ96HA7 1378 aa19.79■□□□□ 0.76
SEC13-211ENST00000431352 PEAK1Q9H792 1746 aa19.79■□□□□ 0.76
SEC13-211ENST00000431352 TMC1Q8TDI8 760 aa19.78■□□□□ 0.76
SEC13-211ENST00000431352 MON2Q7Z3U7 1717 aa19.78■□□□□ 0.76
SEC13-211ENST00000431352 RGPD5Q99666 1765 aa19.78■□□□□ 0.76
SEC13-211ENST00000431352 SBNO2Q9Y2G9 1366 aa19.76■□□□□ 0.75
SEC13-211ENST00000431352 NBPF14Q5TI25 921 aa19.76■□□□□ 0.75
SEC13-211ENST00000431352 NME9Q86XW9 330 aa19.75■□□□□ 0.75
SEC13-211ENST00000431352 CD163L1Q9NR16 1453 aa19.74■□□□□ 0.75
SEC13-211ENST00000431352 C11orf95C9JLR9 678 aaPredicted RBP19.74■□□□□ 0.75
SEC13-211ENST00000431352 PTF1AQ7RTS3 328 aa19.74■□□□□ 0.75
SEC13-211ENST00000431352 MARCH10Q8NA82 808 aaPredicted RBP19.73■□□□□ 0.75
SEC13-211ENST00000431352 CARD10Q9BWT7 1032 aa19.73■□□□□ 0.75
SEC13-211ENST00000431352 CDCA7Q9BWT1 371 aaPredicted RBP19.72■□□□□ 0.75
SEC13-211ENST00000431352 SBF2Q86WG5 1849 aa19.72■□□□□ 0.75
SEC13-211ENST00000431352 HDGFL2Q7Z4V5 671 aaPredicted RBP19.71■□□□□ 0.75
SEC13-211ENST00000431352 SLC12A5Q9H2X9 1139 aa19.71■□□□□ 0.75
SEC13-211ENST00000431352 ABCC6O95255 1503 aa19.7■□□□□ 0.74
SEC13-211ENST00000431352 USP31Q70CQ4 1352 aa19.7■□□□□ 0.74
SEC13-211ENST00000431352 CCDC7Q96M83 1385 aa19.7■□□□□ 0.74
SEC13-211ENST00000431352 BCL11BQ9C0K0 894 aaPredicted RBP19.69■□□□□ 0.74
SEC13-211ENST00000431352 A0A1W2PP64 1363 aa19.69■□□□□ 0.74
SEC13-211ENST00000431352 USP54Q70EL1 1684 aa19.68■□□□□ 0.74
SEC13-211ENST00000431352 RGPD3A6NKT7 1758 aaPredicted RBP19.68■□□□□ 0.74
SEC13-211ENST00000431352 LTN1O94822 1766 aa19.68■□□□□ 0.74
SEC13-211ENST00000431352 RGPD4Q7Z3J3 1758 aa19.68■□□□□ 0.74
SEC13-211ENST00000431352 NLRP2Q9NX02 1062 aa19.68■□□□□ 0.74
SEC13-211ENST00000431352 TNS2Q63HR2 1409 aa19.68■□□□□ 0.74
SEC13-211ENST00000431352 EDC4Q6P2E9 1401 aaKnown RBP19.68■□□□□ 0.74
SEC13-211ENST00000431352 EXOC5O00471 708 aa19.67■□□□□ 0.74
SEC13-211ENST00000431352 ANO8Q9HCE9 1232 aaPredicted RBP19.67■□□□□ 0.74
SEC13-211ENST00000431352 TERF2IPQ9NYB0 399 aa19.66■□□□□ 0.74
SEC13-211ENST00000431352 ERBB3P21860 1342 aa19.66■□□□□ 0.74
SEC13-211ENST00000431352 PLSCR1O15162 318 aa19.65■□□□□ 0.74
SEC13-211ENST00000431352 PPP1R1BQ9UD71 204 aaPredicted RBP19.65■□□□□ 0.74
SEC13-211ENST00000431352 ANKRD24Q8TF21 1146 aa19.64■□□□□ 0.73
SEC13-211ENST00000431352 SPON1Q9HCB6 807 aa19.64■□□□□ 0.73
SEC13-211ENST00000431352 BCL9O00512 1426 aa19.64■□□□□ 0.73
SEC13-211ENST00000431352 ACSBG1Q96GR2 724 aa19.63■□□□□ 0.73
SEC13-211ENST00000431352 ST20-MTHFSA0A0A6YYL1 179 aa19.62■□□□□ 0.73
SEC13-211ENST00000431352 KCNQ2O43526 872 aa19.62■□□□□ 0.73
SEC13-211ENST00000431352 IL2RBP14784 551 aa19.61■□□□□ 0.73
SEC13-211ENST00000431352 PROM2Q8N271 834 aa19.61■□□□□ 0.73
SEC13-211ENST00000431352 LTV1Q96GA3 475 aaPredicted RBP19.61■□□□□ 0.73
SEC13-211ENST00000431352 TXNRD1Q16881 649 aa19.6■□□□□ 0.73
SEC13-211ENST00000431352 TESK2Q96S53 571 aa19.6■□□□□ 0.73
SEC13-211ENST00000431352 PDGFDQ9GZP0 370 aaPredicted RBP19.6■□□□□ 0.73
SEC13-211ENST00000431352 NHSQ6T4R5 1651 aa19.59■□□□□ 0.73
SEC13-211ENST00000431352 CASZ1Q86V15 1759 aa19.59■□□□□ 0.73
SEC13-211ENST00000431352 ZBTB7AO95365 584 aa19.58■□□□□ 0.72
SEC13-211ENST00000431352 STK32BQ9NY57 414 aa19.58■□□□□ 0.72
SEC13-211ENST00000431352 NINLQ9Y2I6 1382 aa19.57■□□□□ 0.72
SEC13-211ENST00000431352 PUS7Q96PZ0 661 aaKnown RBP19.57■□□□□ 0.72
SEC13-211ENST00000431352 COG3Q96JB2 828 aa19.56■□□□□ 0.72
SEC13-211ENST00000431352 IP6K1Q92551 441 aa19.55■□□□□ 0.72
SEC13-211ENST00000431352 FBLN1P23142 703 aa19.54■□□□□ 0.72
SEC13-211ENST00000431352 MAP3K19Q56UN5 1328 aa19.53■□□□□ 0.72
SEC13-211ENST00000431352 AMPHP49418 695 aa19.53■□□□□ 0.72
SEC13-211ENST00000431352 USP47Q96K76 1375 aa19.53■□□□□ 0.72
SEC13-211ENST00000431352 TRIM26Q12899 539 aaPredicted RBP19.52■□□□□ 0.72
SEC13-211ENST00000431352 SLC15A2Q16348 729 aa19.52■□□□□ 0.72
SEC13-211ENST00000431352 DDX54Q8TDD1 881 aaKnown RBP19.52■□□□□ 0.72
SEC13-211ENST00000431352 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.72
SEC13-211ENST00000431352 BTAF1O14981 1849 aa19.52■□□□□ 0.72
SEC13-211ENST00000431352 ANKRD36BQ8N2N9 1353 aa19.52■□□□□ 0.72
SEC13-211ENST00000431352 MYOM1P52179 1685 aa19.52■□□□□ 0.71
SEC13-211ENST00000431352 FAM208AQ9UK61 1670 aaKnown RBP19.52■□□□□ 0.71
SEC13-211ENST00000431352 HOXC9P31274 260 aa19.5■□□□□ 0.71
SEC13-211ENST00000431352 TMF1P82094 1093 aa19.49■□□□□ 0.71
SEC13-211ENST00000431352 GGNBP2Q9H3C7 697 aa19.49■□□□□ 0.71
SEC13-211ENST00000431352 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
SEC13-211ENST00000431352 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
SEC13-211ENST00000431352 SLC24A1O60721 1099 aa19.48■□□□□ 0.71
SEC13-211ENST00000431352 YY1P25490 414 aa19.48■□□□□ 0.71
SEC13-211ENST00000431352 RRS1Q15050 365 aaKnown RBP19.48■□□□□ 0.71
SEC13-211ENST00000431352 PAPPAQ13219 1627 aa19.47■□□□□ 0.71
SEC13-211ENST00000431352 PTGER2P43116 358 aa19.47■□□□□ 0.71
SEC13-211ENST00000431352 SYTL4Q96C24 671 aaPredicted RBP19.47■□□□□ 0.71
SEC13-211ENST00000431352 MEGF6O75095 1541 aa19.46■□□□□ 0.71
SEC13-211ENST00000431352 ZNF827Q17R98 1081 aa19.46■□□□□ 0.71
SEC13-211ENST00000431352 RGPD2P0DJD1 1756 aa19.46■□□□□ 0.71
SEC13-211ENST00000431352 USHBP1Q8N6Y0 703 aa19.45■□□□□ 0.7
SEC13-211ENST00000431352 RTL1A6NKG5 1358 aa19.44■□□□□ 0.7
SEC13-211ENST00000431352 MTFR1LQ9H019 292 aa19.44■□□□□ 0.7
SEC13-211ENST00000431352 LRRC4BQ9NT99 713 aa19.44■□□□□ 0.7
SEC13-211ENST00000431352 DOT1LQ8TEK3 1739 aa19.44■□□□□ 0.7
SEC13-211ENST00000431352 FYB1O15117 783 aa19.43■□□□□ 0.7
SEC13-211ENST00000431352 SMG6Q86US8 1419 aaKnown RBP19.42■□□□□ 0.7
SEC13-211ENST00000431352 KIF20BQ96Q89 1820 aa19.42■□□□□ 0.7
SEC13-211ENST00000431352 ZCRB1Q8TBF4 217 aaKnown RBP19.42■□□□□ 0.7
SEC13-211ENST00000431352 FHDC1Q9C0D6 1143 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms