RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 DDX10Q13206 875 aaKnown RBP34.38■■■■□ 3.09
CPNE1-212ENST00000430570 VPS72Q15906 364 aa34.37■■■■□ 3.09
CPNE1-212ENST00000430570 CC2D1BQ5T0F9 858 aaKnown RBP34.37■■■■□ 3.09
CPNE1-212ENST00000430570 RGPD5Q99666 1765 aa34.37■■■■□ 3.09
CPNE1-212ENST00000430570 ZNF316A6NFI3 1004 aaPredicted RBP34.36■■■■□ 3.09
CPNE1-212ENST00000430570 TNNT2P45379 298 aaPredicted RBP34.36■■■■□ 3.09
CPNE1-212ENST00000430570 EVA1CP58658 441 aa34.36■■■■□ 3.09
CPNE1-212ENST00000430570 MORC1Q86VD1 984 aa34.35■■■■□ 3.09
CPNE1-212ENST00000430570 COL5A2P05997 1499 aaPredicted RBP34.34■■■■□ 3.09
CPNE1-212ENST00000430570 RXRBP28702 533 aa34.34■■■■□ 3.09
CPNE1-212ENST00000430570 CNGB1Q14028 1251 aaPredicted RBP34.34■■■■□ 3.09
CPNE1-212ENST00000430570 GJD4Q96KN9 370 aaPredicted RBP34.34■■■■□ 3.09
CPNE1-212ENST00000430570 IP6K1Q92551 441 aa34.33■■■■□ 3.09
CPNE1-212ENST00000430570 CCDC9Q9Y3X0 531 aaKnown RBP34.33■■■■□ 3.09
CPNE1-212ENST00000430570 RBM6P78332 1123 aaKnown RBP34.32■■■■□ 3.09
CPNE1-212ENST00000430570 LARP1Q6PKG0 1096 aaKnown RBP34.32■■■■□ 3.09
CPNE1-212ENST00000430570 ILDR2Q71H61 639 aa34.32■■■■□ 3.09
CPNE1-212ENST00000430570 AMPHP49418 695 aa34.31■■■■□ 3.08
CPNE1-212ENST00000430570 HOXC9P31274 260 aa34.3■■■■□ 3.08
CPNE1-212ENST00000430570 EMILIN1Q9Y6C2 1016 aa34.3■■■■□ 3.08
CPNE1-212ENST00000430570 ABCC6O95255 1503 aa34.3■■■■□ 3.08
CPNE1-212ENST00000430570 NPC1L1Q9UHC9 1359 aa34.3■■■■□ 3.08
CPNE1-212ENST00000430570 GLI3P10071 1580 aa34.29■■■■□ 3.08
CPNE1-212ENST00000430570 POLKQ9UBT6 870 aa34.29■■■■□ 3.08
CPNE1-212ENST00000430570 MAP2P11137 1827 aaKnown RBP34.28■■■■□ 3.08
CPNE1-212ENST00000430570 SPATA31A5Q5VU36 1347 aa34.28■■■■□ 3.08
CPNE1-212ENST00000430570 SPATA31A7Q8IWB4 1347 aa34.28■■■■□ 3.08
CPNE1-212ENST00000430570 PEAK1Q9H792 1746 aa34.27■■■■□ 3.08
CPNE1-212ENST00000430570 SPATA31A1Q5TZJ5 1347 aa34.24■■■■□ 3.07
CPNE1-212ENST00000430570 WDR17Q8IZU2 1322 aa34.24■■■■□ 3.07
CPNE1-212ENST00000430570 ANKRD24Q8TF21 1146 aa34.24■■■■□ 3.07
CPNE1-212ENST00000430570 BLMP54132 1417 aaPredicted RBP34.23■■■■□ 3.07
CPNE1-212ENST00000430570 RTL1A6NKG5 1358 aa34.23■■■■□ 3.07
CPNE1-212ENST00000430570 PPM1GO15355 546 aaPredicted RBP34.23■■■■□ 3.07
CPNE1-212ENST00000430570 CSB-PGBD3P0DP91 1061 aa34.23■■■■□ 3.07
CPNE1-212ENST00000430570 HSP90AB2PQ58FF8 381 aa34.23■■■■□ 3.07
CPNE1-212ENST00000430570 LTV1Q96GA3 475 aaPredicted RBP34.23■■■■□ 3.07
CPNE1-212ENST00000430570 ERBB3P21860 1342 aa34.22■■■■□ 3.07
CPNE1-212ENST00000430570 USP35Q9P2H5 1018 aa34.22■■■■□ 3.07
CPNE1-212ENST00000430570 TOM1L2Q6ZVM7 507 aa34.21■■■■□ 3.07
CPNE1-212ENST00000430570 FLT4P35916 1363 aa34.2■■■■□ 3.07
CPNE1-212ENST00000430570 KIF24Q5T7B8 1368 aa34.2■■■■□ 3.07
CPNE1-212ENST00000430570 CRB1P82279 1406 aa34.2■■■■□ 3.07
CPNE1-212ENST00000430570 FAM98CQ17RN3 349 aaKnown RBP34.18■■■■□ 3.06
CPNE1-212ENST00000430570 INSRP06213 1382 aa34.17■■■■□ 3.06
CPNE1-212ENST00000430570 RGS12O14924 1447 aa34.16■■■■□ 3.06
CPNE1-212ENST00000430570 CDK12Q9NYV4 1490 aaPredicted RBP34.15■■■■□ 3.06
CPNE1-212ENST00000430570 ONECUT3O60422 494 aaPredicted RBP34.15■■■■□ 3.06
CPNE1-212ENST00000430570 TCP11L2Q8N4U5 519 aa34.14■■■■□ 3.06
CPNE1-212ENST00000430570 CARD10Q9BWT7 1032 aa34.14■■■■□ 3.06
CPNE1-212ENST00000430570 NLRP2Q9NX02 1062 aa34.13■■■■□ 3.05
CPNE1-212ENST00000430570 SMG6Q86US8 1419 aaKnown RBP34.13■■■■□ 3.05
CPNE1-212ENST00000430570 MTHFSP49914 203 aa34.1■■■■□ 3.05
CPNE1-212ENST00000430570 BARGINQ6ZT62 677 aa34.1■■■■□ 3.05
CPNE1-212ENST00000430570 SEPT12Q8IYM1 358 aa34.1■■■■□ 3.05
CPNE1-212ENST00000430570 THRAP3Q9Y2W1 955 aaKnown RBP34.09■■■■□ 3.05
CPNE1-212ENST00000430570 RGPD2P0DJD1 1756 aa34.08■■■■□ 3.05
CPNE1-212ENST00000430570 NBPF6Q5VWK0 638 aa34.06■■■■□ 3.04
CPNE1-212ENST00000430570 NBPF4Q96M43 638 aa34.06■■■■□ 3.04
CPNE1-212ENST00000430570 A0A0G2JS52 829 aa34.05■■■■□ 3.04
CPNE1-212ENST00000430570 MYT1Q01538 1121 aa34.05■■■■□ 3.04
CPNE1-212ENST00000430570 EIF4A2Q14240 407 aaKnown RBP34.04■■■■□ 3.04
CPNE1-212ENST00000430570 PARD3Q8TEW0 1356 aa34.04■■■■□ 3.04
CPNE1-212ENST00000430570 THSD7AQ9UPZ6 1657 aa34.04■■■■□ 3.04
CPNE1-212ENST00000430570 PPP2R1AP30153 589 aa34.04■■■■□ 3.04
CPNE1-212ENST00000430570 FAM208AQ9UK61 1670 aaKnown RBP34.03■■■■□ 3.04
CPNE1-212ENST00000430570 USHBP1Q8N6Y0 703 aa34.02■■■■□ 3.04
CPNE1-212ENST00000430570 BRWD3Q6RI45 1802 aa34■■■■□ 3.03
CPNE1-212ENST00000430570 DISP2A7MBM2 1401 aa33.99■■■■□ 3.03
CPNE1-212ENST00000430570 EYA1Q99502 592 aa33.99■■■■□ 3.03
CPNE1-212ENST00000430570 WNK3Q9BYP7 1800 aa33.97■■■■□ 3.03
CPNE1-212ENST00000430570 IL13P35225 146 aa33.95■■■■□ 3.03
CPNE1-212ENST00000430570 RALBP1Q15311 655 aa33.95■■■■□ 3.03
CPNE1-212ENST00000430570 CDCA7Q9BWT1 371 aaPredicted RBP33.94■■■■□ 3.02
CPNE1-212ENST00000430570 IL2RBP14784 551 aa33.93■■■■□ 3.02
CPNE1-212ENST00000430570 KRT27Q7Z3Y8 459 aa33.93■■■■□ 3.02
CPNE1-212ENST00000430570 PARP4Q9UKK3 1724 aaKnown RBP33.93■■■■□ 3.02
CPNE1-212ENST00000430570 COL3A1P02461 1466 aaPredicted RBP33.9■■■■□ 3.02
CPNE1-212ENST00000430570 NCAPD2Q15021 1401 aa33.9■■■■□ 3.02
CPNE1-212ENST00000430570 DDB1Q16531 1140 aa33.89■■■■□ 3.02
CPNE1-212ENST00000430570 PRKRIP1Q9H875 184 aaPredicted RBP33.89■■■■□ 3.02
CPNE1-212ENST00000430570 LRRC37A3O60309 1634 aa33.88■■■■□ 3.01
CPNE1-212ENST00000430570 DIAPH1O60610 1272 aaKnown RBP33.88■■■■□ 3.01
CPNE1-212ENST00000430570 FAM182BQ5T319 152 aa33.88■■■■□ 3.01
CPNE1-212ENST00000430570 IGSF1Q8N6C5 1336 aa33.88■■■■□ 3.01
CPNE1-212ENST00000430570 MEGF6O75095 1541 aa33.87■■■■□ 3.01
CPNE1-212ENST00000430570 EXOC5O00471 708 aa33.86■■■■□ 3.01
CPNE1-212ENST00000430570 PDE3BQ13370 1112 aa33.86■■■■□ 3.01
CPNE1-212ENST00000430570 RGPD1P0DJD0 1748 aa33.83■■■■□ 3.01
CPNE1-212ENST00000430570 RAPGEF4Q8WZA2 1011 aa33.83■■■■□ 3.01
CPNE1-212ENST00000430570 CFAP53Q96M91 514 aa33.83■■■■□ 3.01
CPNE1-212ENST00000430570 AEBP1Q8IUX7 1158 aa33.82■■■■□ 3.01
CPNE1-212ENST00000430570 MYBBP1AQ9BQG0 1328 aaKnown RBP33.82■■■■□ 3
CPNE1-212ENST00000430570 TATP17735 454 aaPredicted RBP33.8■■■■□ 3
CPNE1-212ENST00000430570 MARCH10Q8NA82 808 aaPredicted RBP33.8■■■■□ 3
CPNE1-212ENST00000430570 TNS2Q63HR2 1409 aa33.8■■■■□ 3
CPNE1-212ENST00000430570 SULT6B1Q6IMI4 303 aa33.79■■■■□ 3
CPNE1-212ENST00000430570 OVOS2A0A0G2JMS6 1433 aa33.79■■■■□ 3
CPNE1-212ENST00000430570 U2SURPO15042 1029 aaKnown RBP33.77■■■■□ 3
CPNE1-212ENST00000430570 ZCRB1Q8TBF4 217 aaKnown RBP33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms