RNA–Protein interactions for RNA: ENST00000430317.2

COL6A4P2-201, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 3

Gene COL6A4P2, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-201ENST00000430317 SOX12O15370 315 aa12□□□□□ -0.49
COL6A4P2-201ENST00000430317 AMPHP49418 695 aa12□□□□□ -0.49
COL6A4P2-201ENST00000430317 PRDM11Q9NQV5 511 aa12□□□□□ -0.49
COL6A4P2-201ENST00000430317 MAP3K19Q56UN5 1328 aa12□□□□□ -0.49
COL6A4P2-201ENST00000430317 ARHGEF25Q86VW2 580 aa11.99□□□□□ -0.49
COL6A4P2-201ENST00000430317 POLKQ9UBT6 870 aa11.99□□□□□ -0.49
COL6A4P2-201ENST00000430317 INSRP06213 1382 aa11.99□□□□□ -0.49
COL6A4P2-201ENST00000430317 KIAA0232Q92628 1395 aa11.99□□□□□ -0.49
COL6A4P2-201ENST00000430317 FAM208AQ9UK61 1670 aaKnown RBP11.99□□□□□ -0.49
COL6A4P2-201ENST00000430317 ABCB7O75027 752 aa11.98□□□□□ -0.49
COL6A4P2-201ENST00000430317 MTHFSP49914 203 aa11.98□□□□□ -0.49
COL6A4P2-201ENST00000430317 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
COL6A4P2-201ENST00000430317 PPM1GO15355 546 aaPredicted RBP11.97□□□□□ -0.49
COL6A4P2-201ENST00000430317 RRS1Q15050 365 aaKnown RBP11.97□□□□□ -0.49
COL6A4P2-201ENST00000430317 IP6K1Q92551 441 aa11.97□□□□□ -0.49
COL6A4P2-201ENST00000430317 MRS2Q9HD23 443 aa11.97□□□□□ -0.49
COL6A4P2-201ENST00000430317 NUDCQ9Y266 331 aa11.97□□□□□ -0.49
COL6A4P2-201ENST00000430317 EMILIN1Q9Y6C2 1016 aa11.97□□□□□ -0.49
COL6A4P2-201ENST00000430317 NWD2Q9ULI1 1742 aa11.97□□□□□ -0.49
COL6A4P2-201ENST00000430317 LMO7Q8WWI1 1683 aa11.97□□□□□ -0.49
COL6A4P2-201ENST00000430317 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
COL6A4P2-201ENST00000430317 HOXC9P31274 260 aa11.96□□□□□ -0.49
COL6A4P2-201ENST00000430317 ZC3H6P61129 1189 aaKnown RBP11.96□□□□□ -0.49
COL6A4P2-201ENST00000430317 PEAK1Q9H792 1746 aa11.96□□□□□ -0.49
COL6A4P2-201ENST00000430317 ZBTB7CA1YPR0 619 aa11.95□□□□□ -0.5
COL6A4P2-201ENST00000430317 DIAPH1O60610 1272 aaKnown RBP11.95□□□□□ -0.5
COL6A4P2-201ENST00000430317 MEX3CQ5U5Q3 659 aaKnown RBP11.95□□□□□ -0.5
COL6A4P2-201ENST00000430317 COL3A1P02461 1466 aaPredicted RBP11.95□□□□□ -0.5
COL6A4P2-201ENST00000430317 PLCH1Q4KWH8 1693 aa11.94□□□□□ -0.5
COL6A4P2-201ENST00000430317 NUTM2BA6NNL0 878 aaPredicted RBP11.94□□□□□ -0.5
COL6A4P2-201ENST00000430317 NUTM2EB1AL46 878 aaPredicted RBP11.94□□□□□ -0.5
COL6A4P2-201ENST00000430317 WDR43Q15061 677 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL6A4P2-201ENST00000430317 NUTM2AQ8IVF1 878 aaPredicted RBP11.94□□□□□ -0.5
COL6A4P2-201ENST00000430317 MIER1Q8N108 512 aa11.94□□□□□ -0.5
COL6A4P2-201ENST00000430317 COL18A1P39060 1754 aa11.94□□□□□ -0.5
COL6A4P2-201ENST00000430317 ERBB3P21860 1342 aa11.93□□□□□ -0.5
COL6A4P2-201ENST00000430317 ADAMTS2O95450 1211 aa11.93□□□□□ -0.5
COL6A4P2-201ENST00000430317 COL5A2P05997 1499 aaPredicted RBP11.93□□□□□ -0.5
COL6A4P2-201ENST00000430317 LRP6O75581 1613 aa11.93□□□□□ -0.5
COL6A4P2-201ENST00000430317 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
COL6A4P2-201ENST00000430317 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.92□□□□□ -0.5
COL6A4P2-201ENST00000430317 RBM42Q9BTD8 480 aaKnown RBP11.92□□□□□ -0.5
COL6A4P2-201ENST00000430317 PNNQ9H307 717 aaKnown RBP11.92□□□□□ -0.5
COL6A4P2-201ENST00000430317 SLIT2O94813 1529 aa11.91□□□□□ -0.5
COL6A4P2-201ENST00000430317 CAMTA1Q9Y6Y1 1673 aa11.91□□□□□ -0.5
COL6A4P2-201ENST00000430317 CSB-PGBD3P0DP91 1061 aa11.91□□□□□ -0.5
COL6A4P2-201ENST00000430317 FBLN1P23142 703 aa11.91□□□□□ -0.5
COL6A4P2-201ENST00000430317 CHRNA2Q15822 529 aa11.91□□□□□ -0.5
COL6A4P2-201ENST00000430317 HSP90AB2PQ58FF8 381 aa11.91□□□□□ -0.5
COL6A4P2-201ENST00000430317 WDR17Q8IZU2 1322 aa11.9□□□□□ -0.5
COL6A4P2-201ENST00000430317 FAM83GA6ND36 823 aa11.9□□□□□ -0.5
COL6A4P2-201ENST00000430317 NEFMP07197 916 aa11.9□□□□□ -0.5
COL6A4P2-201ENST00000430317 EVA1CP58658 441 aa11.9□□□□□ -0.5
COL6A4P2-201ENST00000430317 EIF4A2Q14240 407 aaKnown RBP11.9□□□□□ -0.5
COL6A4P2-201ENST00000430317 NRAPQ86VF7 1730 aa11.9□□□□□ -0.5
COL6A4P2-201ENST00000430317 ANKRD24Q8TF21 1146 aa11.9□□□□□ -0.5
COL6A4P2-201ENST00000430317 NGLY1Q96IV0 654 aa11.9□□□□□ -0.5
COL6A4P2-201ENST00000430317 C8orf37Q96NL8 207 aa11.9□□□□□ -0.5
COL6A4P2-201ENST00000430317 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
COL6A4P2-201ENST00000430317 CRB1P82279 1406 aa11.89□□□□□ -0.51
COL6A4P2-201ENST00000430317 U2SURPO15042 1029 aaKnown RBP11.89□□□□□ -0.51
COL6A4P2-201ENST00000430317 BTG4Q9NY30 223 aa11.89□□□□□ -0.51
COL6A4P2-201ENST00000430317 IGSF1Q8N6C5 1336 aa11.88□□□□□ -0.51
COL6A4P2-201ENST00000430317 NCAPD2Q15021 1401 aa11.88□□□□□ -0.51
COL6A4P2-201ENST00000430317 RGPD5Q99666 1765 aa11.88□□□□□ -0.51
COL6A4P2-201ENST00000430317 U2AF1L5P0DN76 240 aaPredicted RBP11.88□□□□□ -0.51
COL6A4P2-201ENST00000430317 IL13P35225 146 aa11.88□□□□□ -0.51
COL6A4P2-201ENST00000430317 U2AF1Q01081 240 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL6A4P2-201ENST00000430317 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
COL6A4P2-201ENST00000430317 KDRP35968 1356 aa11.88□□□□□ -0.51
COL6A4P2-201ENST00000430317 TOM1L2Q6ZVM7 507 aa11.87□□□□□ -0.51
COL6A4P2-201ENST00000430317 UNC5CLQ8IV45 518 aa11.87□□□□□ -0.51
COL6A4P2-201ENST00000430317 PNISRQ8TF01 805 aaKnown RBP11.87□□□□□ -0.51
COL6A4P2-201ENST00000430317 LTV1Q96GA3 475 aaPredicted RBP11.87□□□□□ -0.51
COL6A4P2-201ENST00000430317 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
COL6A4P2-201ENST00000430317 FCHSD2O94868 740 aa11.86□□□□□ -0.51
COL6A4P2-201ENST00000430317 CARD10Q9BWT7 1032 aa11.86□□□□□ -0.51
COL6A4P2-201ENST00000430317 STRN4Q9NRL3 753 aa11.86□□□□□ -0.51
COL6A4P2-201ENST00000430317 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
COL6A4P2-201ENST00000430317 MAPK8IP3Q9UPT6 1336 aa11.86□□□□□ -0.51
COL6A4P2-201ENST00000430317 ZNF772Q68DY9 489 aaPredicted RBP11.85□□□□□ -0.51
COL6A4P2-201ENST00000430317 CDCA7Q9BWT1 371 aaPredicted RBP11.85□□□□□ -0.51
COL6A4P2-201ENST00000430317 USP21Q9UK80 565 aa11.85□□□□□ -0.51
COL6A4P2-201ENST00000430317 THRAP3Q9Y2W1 955 aaKnown RBP11.85□□□□□ -0.51
COL6A4P2-201ENST00000430317 PARP4Q9UKK3 1724 aaKnown RBP11.85□□□□□ -0.51
COL6A4P2-201ENST00000430317 AFF2P51816 1311 aa11.85□□□□□ -0.51
COL6A4P2-201ENST00000430317 BCL9LQ86UU0 1499 aa11.84□□□□□ -0.51
COL6A4P2-201ENST00000430317 VPS72Q15906 364 aa11.84□□□□□ -0.51
COL6A4P2-201ENST00000430317 RAPGEF4Q8WZA2 1011 aa11.84□□□□□ -0.51
COL6A4P2-201ENST00000430317 EYA1Q99502 592 aa11.84□□□□□ -0.51
COL6A4P2-201ENST00000430317 TRPC5Q9UL62 973 aaPredicted RBP11.84□□□□□ -0.51
COL6A4P2-201ENST00000430317 CCDC184Q52MB2 194 aa11.83□□□□□ -0.52
COL6A4P2-201ENST00000430317 SULT6B1Q6IMI4 303 aa11.83□□□□□ -0.52
COL6A4P2-201ENST00000430317 FAM9BQ8IZU0 186 aa11.83□□□□□ -0.52
COL6A4P2-201ENST00000430317 NGEFQ8N5V2 710 aa11.83□□□□□ -0.52
COL6A4P2-201ENST00000430317 WNK3Q9BYP7 1800 aa11.82□□□□□ -0.52
COL6A4P2-201ENST00000430317 NBPF6Q5VWK0 638 aa11.82□□□□□ -0.52
COL6A4P2-201ENST00000430317 LARP1Q6PKG0 1096 aaKnown RBP11.82□□□□□ -0.52
COL6A4P2-201ENST00000430317 TCP11L2Q8N4U5 519 aa11.82□□□□□ -0.52
COL6A4P2-201ENST00000430317 NBPF4Q96M43 638 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms