RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 FOXD4L6Q3SYB3 417 aaPredicted RBP13.58□□□□□ -0.24
SEMA4D-209ENST00000429836 FOXD4L3Q6VB84 417 aaPredicted RBP13.58□□□□□ -0.24
SEMA4D-209ENST00000429836 USP26Q9BXU7 913 aa13.57□□□□□ -0.24
SEMA4D-209ENST00000429836 TRPM2O94759 1503 aa13.57□□□□□ -0.24
SEMA4D-209ENST00000429836 C16orf71Q8IYS4 520 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-209ENST00000429836 ABCC11Q96J66 1382 aa13.57□□□□□ -0.24
SEMA4D-209ENST00000429836 PLEKHF1Q96S99 279 aa13.57□□□□□ -0.24
SEMA4D-209ENST00000429836 TTC12Q9H892 705 aaPredicted RBP13.57□□□□□ -0.24
SEMA4D-209ENST00000429836 ADGRB2O60241 1585 aa13.57□□□□□ -0.24
SEMA4D-209ENST00000429836 TSPY26PQ9H489 355 aa13.57□□□□□ -0.24
SEMA4D-209ENST00000429836 TPRNQ4KMQ1 711 aa13.56□□□□□ -0.24
SEMA4D-209ENST00000429836 BBXQ8WY36 941 aaPredicted RBP13.56□□□□□ -0.24
SEMA4D-209ENST00000429836 CWC22Q9HCG8 908 aaKnown RBP13.56□□□□□ -0.24
SEMA4D-209ENST00000429836 ABCA6Q8N139 1617 aa13.56□□□□□ -0.24
SEMA4D-209ENST00000429836 NOLC1Q14978 699 aaKnown RBP eCLIP13.56□□□□□ -0.24
SEMA4D-209ENST00000429836 PLEKHM2Q8IWE5 1019 aa13.56□□□□□ -0.24
SEMA4D-209ENST00000429836 PDE4CQ08493 712 aa13.55□□□□□ -0.24
SEMA4D-209ENST00000429836 STAC3Q96MF2 364 aa13.55□□□□□ -0.24
SEMA4D-209ENST00000429836 OTUD7AQ8TE49 926 aaPredicted RBP13.55□□□□□ -0.24
SEMA4D-209ENST00000429836 GTPBP4Q9BZE4 634 aaKnown RBP13.55□□□□□ -0.24
SEMA4D-209ENST00000429836 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
SEMA4D-209ENST00000429836 PRIMPOLQ96LW4 560 aa13.54□□□□□ -0.24
SEMA4D-209ENST00000429836 BCL2L12Q9HB09 334 aa13.54□□□□□ -0.24
SEMA4D-209ENST00000429836 USP25Q9UHP3 1055 aa13.54□□□□□ -0.24
SEMA4D-209ENST00000429836 UHRF1BP1LA0JNW5 1464 aa13.54□□□□□ -0.24
SEMA4D-209ENST00000429836 UGGT1Q9NYU2 1555 aa13.54□□□□□ -0.24
SEMA4D-209ENST00000429836 ELL2O00472 640 aaPredicted RBP13.54□□□□□ -0.24
SEMA4D-209ENST00000429836 PIBF1Q8WXW3 757 aa13.54□□□□□ -0.24
SEMA4D-209ENST00000429836 GDPD2Q9HCC8 539 aa13.54□□□□□ -0.24
SEMA4D-209ENST00000429836 ST18O60284 1047 aa13.54□□□□□ -0.24
SEMA4D-209ENST00000429836 KIF3AQ9Y496 699 aa13.54□□□□□ -0.24
SEMA4D-209ENST00000429836 APBB1O00213 710 aa13.53□□□□□ -0.24
SEMA4D-209ENST00000429836 HMGN5P82970 282 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-209ENST00000429836 NCBP3Q53F19 620 aaKnown RBP13.53□□□□□ -0.24
SEMA4D-209ENST00000429836 MBD3O95983 291 aa13.52□□□□□ -0.24
SEMA4D-209ENST00000429836 GTF2E1P29083 439 aaPredicted RBP13.52□□□□□ -0.24
SEMA4D-209ENST00000429836 TTC22Q5TAA0 569 aa13.52□□□□□ -0.24
SEMA4D-209ENST00000429836 TMEM132EQ6IEE7 984 aa13.52□□□□□ -0.24
SEMA4D-209ENST00000429836 NOL8Q76FK4 1167 aaKnown RBP13.52□□□□□ -0.24
SEMA4D-209ENST00000429836 KIAA1210Q9ULL0 1709 aa13.52□□□□□ -0.24
SEMA4D-209ENST00000429836 ADGRL1O94910 1474 aa13.52□□□□□ -0.25
SEMA4D-209ENST00000429836 GADD45BO75293 160 aaPredicted RBP13.52□□□□□ -0.25
SEMA4D-209ENST00000429836 U2AF2P26368 475 aaKnown RBP eCLIP13.52□□□□□ -0.25
SEMA4D-209ENST00000429836 GTF2F1P35269 517 aaKnown RBP eCLIP13.52□□□□□ -0.25
SEMA4D-209ENST00000429836 ALDH1L2Q3SY69 923 aa13.52□□□□□ -0.25
SEMA4D-209ENST00000429836 MED14O60244 1454 aa13.52□□□□□ -0.25
SEMA4D-209ENST00000429836 KIF20AO95235 890 aa13.51□□□□□ -0.25
SEMA4D-209ENST00000429836 MAP3K4Q9Y6R4 1608 aa13.51□□□□□ -0.25
SEMA4D-209ENST00000429836 PDCL2Q8N4E4 241 aa13.51□□□□□ -0.25
SEMA4D-209ENST00000429836 THUMPD2Q9BTF0 503 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-209ENST00000429836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEMA4D-209ENST00000429836 PPRC1Q5VV67 1664 aaKnown RBP13.51□□□□□ -0.25
SEMA4D-209ENST00000429836 LETM1O95202 739 aaPredicted RBP13.5□□□□□ -0.25
SEMA4D-209ENST00000429836 INTS3Q68E01 1043 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-209ENST00000429836 AFAP1Q8N556 730 aa13.5□□□□□ -0.25
SEMA4D-209ENST00000429836 TSPYL6Q8N831 410 aa13.5□□□□□ -0.25
SEMA4D-209ENST00000429836 IL16Q14005 1332 aa13.5□□□□□ -0.25
SEMA4D-209ENST00000429836 SMARCA5O60264 1052 aaPredicted RBP13.5□□□□□ -0.25
SEMA4D-209ENST00000429836 ADCY5O95622 1261 aa13.5□□□□□ -0.25
SEMA4D-209ENST00000429836 GGNBP2Q9H3C7 697 aa13.5□□□□□ -0.25
SEMA4D-209ENST00000429836 CHGAP10645 457 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-209ENST00000429836 SDSP20132 328 aa13.5□□□□□ -0.25
SEMA4D-209ENST00000429836 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
SEMA4D-209ENST00000429836 NPM1P06748 294 aaKnown RBP eCLIP13.49□□□□□ -0.25
SEMA4D-209ENST00000429836 ZCCHC11Q5TAX3 1644 aaKnown RBP13.49□□□□□ -0.25
SEMA4D-209ENST00000429836 SBNO2Q9Y2G9 1366 aa13.49□□□□□ -0.25
SEMA4D-209ENST00000429836 PLCB2Q00722 1185 aa13.49□□□□□ -0.25
SEMA4D-209ENST00000429836 TMX3Q96JJ7 454 aa13.49□□□□□ -0.25
SEMA4D-209ENST00000429836 TRAPPC8Q9Y2L5 1435 aa13.48□□□□□ -0.25
SEMA4D-209ENST00000429836 NEK4P51957 841 aa13.48□□□□□ -0.25
SEMA4D-209ENST00000429836 FKBP5Q13451 457 aaPredicted RBP13.48□□□□□ -0.25
SEMA4D-209ENST00000429836 RIOK3O14730 519 aaKnown RBP13.47□□□□□ -0.25
SEMA4D-209ENST00000429836 BRD1O95696 1058 aa13.47□□□□□ -0.25
SEMA4D-209ENST00000429836 ZBTB22O15209 634 aa13.47□□□□□ -0.25
SEMA4D-209ENST00000429836 VAMP4O75379 141 aa13.47□□□□□ -0.25
SEMA4D-209ENST00000429836 HCLS1P14317 486 aaPredicted RBP13.47□□□□□ -0.25
SEMA4D-209ENST00000429836 SYAP1Q96A49 352 aaPredicted RBP13.46□□□□□ -0.25
SEMA4D-209ENST00000429836 CABP2Q9NPB3 220 aa13.46□□□□□ -0.25
SEMA4D-209ENST00000429836 CGNQ9P2M7 1197 aaKnown RBP13.46□□□□□ -0.25
SEMA4D-209ENST00000429836 MYO3AQ8NEV4 1616 aa13.46□□□□□ -0.25
SEMA4D-209ENST00000429836 SAFB2Q14151 953 aaKnown RBP eCLIP13.46□□□□□ -0.25
SEMA4D-209ENST00000429836 SPTLC3Q9NUV7 552 aa13.46□□□□□ -0.25
SEMA4D-209ENST00000429836 USP48Q86UV5 1035 aa13.46□□□□□ -0.26
SEMA4D-209ENST00000429836 PYCARDQ9ULZ3 195 aa13.46□□□□□ -0.26
SEMA4D-209ENST00000429836 MYOM2P54296 1465 aa13.45□□□□□ -0.26
SEMA4D-209ENST00000429836 SPAG9O60271 1321 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-209ENST00000429836 DCTPP1Q9H773 170 aa13.45□□□□□ -0.26
SEMA4D-209ENST00000429836 QRICH2Q9H0J4 1663 aa13.45□□□□□ -0.26
SEMA4D-209ENST00000429836 ZNF771Q7L3S4 317 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-209ENST00000429836 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-209ENST00000429836 CHMP4BQ9H444 224 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-209ENST00000429836 TMEM51Q9NW97 253 aa13.45□□□□□ -0.26
SEMA4D-209ENST00000429836 ASXL2Q76L83 1435 aa13.44□□□□□ -0.26
SEMA4D-209ENST00000429836 ABCC4O15439 1325 aa13.44□□□□□ -0.26
SEMA4D-209ENST00000429836 CASC1Q6TDU7 716 aa13.44□□□□□ -0.26
SEMA4D-209ENST00000429836 USP32Q8NFA0 1604 aa13.43□□□□□ -0.26
SEMA4D-209ENST00000429836 PIK3R4Q99570 1358 aa13.43□□□□□ -0.26
SEMA4D-209ENST00000429836 VGLL3A8MV65 326 aa13.43□□□□□ -0.26
SEMA4D-209ENST00000429836 KIF3BO15066 747 aa13.43□□□□□ -0.26
SEMA4D-209ENST00000429836 PTCH1Q13635 1447 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms