RNA–Protein interactions for RNA: ENST00000429812.5

PDLIM2-210, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-210ENST00000429812 SLC12A5Q9H2X9 1139 aa25.31■■□□□ 1.64
PDLIM2-210ENST00000429812 LRP5O75197 1615 aa25.3■■□□□ 1.64
PDLIM2-210ENST00000429812 PTF1AQ7RTS3 328 aa25.3■■□□□ 1.64
PDLIM2-210ENST00000429812 KCNH5Q8NCM2 988 aa25.3■■□□□ 1.64
PDLIM2-210ENST00000429812 RGPD5Q99666 1765 aa25.29■■□□□ 1.64
PDLIM2-210ENST00000429812 DDB1Q16531 1140 aa25.29■■□□□ 1.64
PDLIM2-210ENST00000429812 SBNO2Q9Y2G9 1366 aa25.29■■□□□ 1.64
PDLIM2-210ENST00000429812 CD163L1Q9NR16 1453 aa25.28■■□□□ 1.64
PDLIM2-210ENST00000429812 NFAT5O94916 1531 aa25.28■■□□□ 1.64
PDLIM2-210ENST00000429812 LRRC37A3O60309 1634 aa25.27■■□□□ 1.64
PDLIM2-210ENST00000429812 MON2Q7Z3U7 1717 aa25.26■■□□□ 1.63
PDLIM2-210ENST00000429812 MARCH10Q8NA82 808 aaPredicted RBP25.25■■□□□ 1.63
PDLIM2-210ENST00000429812 OVOS2A0A0G2JMS6 1433 aa25.25■■□□□ 1.63
PDLIM2-210ENST00000429812 OVOS2A0A0J9YW53 1432 aa25.25■■□□□ 1.63
PDLIM2-210ENST00000429812 OVOS2Q6IE36 1432 aa25.25■■□□□ 1.63
PDLIM2-210ENST00000429812 PEAK1Q9H792 1746 aa25.24■■□□□ 1.63
PDLIM2-210ENST00000429812 PARD3Q8TEW0 1356 aa25.24■■□□□ 1.63
PDLIM2-210ENST00000429812 CARD10Q9BWT7 1032 aa25.23■■□□□ 1.63
PDLIM2-210ENST00000429812 RREB1Q92766 1687 aa25.23■■□□□ 1.63
PDLIM2-210ENST00000429812 HDGFL2Q7Z4V5 671 aaPredicted RBP25.22■■□□□ 1.63
PDLIM2-210ENST00000429812 NUP188Q5SRE5 1749 aa25.22■■□□□ 1.63
PDLIM2-210ENST00000429812 USP31Q70CQ4 1352 aa25.21■■□□□ 1.63
PDLIM2-210ENST00000429812 ST20-MTHFSA0A0A6YYL1 179 aa25.2■■□□□ 1.62
PDLIM2-210ENST00000429812 A0A1W2PP64 1363 aa25.19■■□□□ 1.62
PDLIM2-210ENST00000429812 WNK3Q9BYP7 1800 aa25.19■■□□□ 1.62
PDLIM2-210ENST00000429812 NBPF14Q5TI25 921 aa25.18■■□□□ 1.62
PDLIM2-210ENST00000429812 TESK2Q96S53 571 aa25.18■■□□□ 1.62
PDLIM2-210ENST00000429812 NLRP2Q9NX02 1062 aa25.17■■□□□ 1.62
PDLIM2-210ENST00000429812 SBF2Q86WG5 1849 aa25.16■■□□□ 1.62
PDLIM2-210ENST00000429812 EDC4Q6P2E9 1401 aaKnown RBP25.16■■□□□ 1.62
PDLIM2-210ENST00000429812 CDCA7Q9BWT1 371 aaPredicted RBP25.16■■□□□ 1.62
PDLIM2-210ENST00000429812 TERF2IPQ9NYB0 399 aa25.16■■□□□ 1.62
PDLIM2-210ENST00000429812 EXOC5O00471 708 aa25.15■■□□□ 1.62
PDLIM2-210ENST00000429812 TRIM26Q12899 539 aaPredicted RBP25.15■■□□□ 1.62
PDLIM2-210ENST00000429812 BCL11BQ9C0K0 894 aaPredicted RBP25.15■■□□□ 1.62
PDLIM2-210ENST00000429812 C11orf95C9JLR9 678 aaPredicted RBP25.14■■□□□ 1.62
PDLIM2-210ENST00000429812 ANO8Q9HCE9 1232 aaPredicted RBP25.14■■□□□ 1.62
PDLIM2-210ENST00000429812 ERBB3P21860 1342 aa25.13■■□□□ 1.61
PDLIM2-210ENST00000429812 ANKRD24Q8TF21 1146 aa25.13■■□□□ 1.61
PDLIM2-210ENST00000429812 CCDC7Q96M83 1385 aa25.13■■□□□ 1.61
PDLIM2-210ENST00000429812 FBLN1P23142 703 aa25.12■■□□□ 1.61
PDLIM2-210ENST00000429812 PROM2Q8N271 834 aa25.12■■□□□ 1.61
PDLIM2-210ENST00000429812 LTN1O94822 1766 aa25.11■■□□□ 1.61
PDLIM2-210ENST00000429812 USP54Q70EL1 1684 aa25.11■■□□□ 1.61
PDLIM2-210ENST00000429812 PLSCR1O15162 318 aa25.11■■□□□ 1.61
PDLIM2-210ENST00000429812 KCNQ2O43526 872 aa25.11■■□□□ 1.61
PDLIM2-210ENST00000429812 LTV1Q96GA3 475 aaPredicted RBP25.1■■□□□ 1.61
PDLIM2-210ENST00000429812 ACSBG1Q96GR2 724 aa25.1■■□□□ 1.61
PDLIM2-210ENST00000429812 ABCC6O95255 1503 aa25.09■■□□□ 1.61
PDLIM2-210ENST00000429812 PUS7Q96PZ0 661 aaKnown RBP25.09■■□□□ 1.61
PDLIM2-210ENST00000429812 TNS2Q63HR2 1409 aa25.09■■□□□ 1.61
PDLIM2-210ENST00000429812 PDGFDQ9GZP0 370 aaPredicted RBP25.08■■□□□ 1.61
PDLIM2-210ENST00000429812 BCL9O00512 1426 aa25.06■■□□□ 1.6
PDLIM2-210ENST00000429812 IL2RBP14784 551 aa25.06■■□□□ 1.6
PDLIM2-210ENST00000429812 IP6K1Q92551 441 aa25.04■■□□□ 1.6
PDLIM2-210ENST00000429812 TXNRD1Q16881 649 aa25.03■■□□□ 1.6
PDLIM2-210ENST00000429812 COG3Q96JB2 828 aa25.03■■□□□ 1.6
PDLIM2-210ENST00000429812 SPON1Q9HCB6 807 aa25.02■■□□□ 1.6
PDLIM2-210ENST00000429812 MAP3K19Q56UN5 1328 aa25.02■■□□□ 1.6
PDLIM2-210ENST00000429812 RGPD3A6NKT7 1758 aaPredicted RBP25.02■■□□□ 1.6
PDLIM2-210ENST00000429812 RGPD4Q7Z3J3 1758 aa25.02■■□□□ 1.6
PDLIM2-210ENST00000429812 USP47Q96K76 1375 aa25.02■■□□□ 1.6
PDLIM2-210ENST00000429812 PPP1R1BQ9UD71 204 aaPredicted RBP25■■□□□ 1.59
PDLIM2-210ENST00000429812 NINLQ9Y2I6 1382 aa25■■□□□ 1.59
PDLIM2-210ENST00000429812 GGNBP2Q9H3C7 697 aa24.99■■□□□ 1.59
PDLIM2-210ENST00000429812 ANKRD36BQ8N2N9 1353 aa24.98■■□□□ 1.59
PDLIM2-210ENST00000429812 ZBTB7AO95365 584 aa24.98■■□□□ 1.59
PDLIM2-210ENST00000429812 HOXC9P31274 260 aa24.98■■□□□ 1.59
PDLIM2-210ENST00000429812 TMF1P82094 1093 aa24.98■■□□□ 1.59
PDLIM2-210ENST00000429812 DDX54Q8TDD1 881 aaKnown RBP24.98■■□□□ 1.59
PDLIM2-210ENST00000429812 AMPHP49418 695 aa24.97■■□□□ 1.59
PDLIM2-210ENST00000429812 RRS1Q15050 365 aaKnown RBP24.97■■□□□ 1.59
PDLIM2-210ENST00000429812 NHSQ6T4R5 1651 aa24.95■■□□□ 1.58
PDLIM2-210ENST00000429812 FYB1O15117 783 aa24.95■■□□□ 1.58
PDLIM2-210ENST00000429812 STK32BQ9NY57 414 aa24.95■■□□□ 1.58
PDLIM2-210ENST00000429812 ATF5Q9Y2D1 282 aaPredicted RBP24.95■■□□□ 1.58
PDLIM2-210ENST00000429812 CASZ1Q86V15 1759 aa24.94■■□□□ 1.58
PDLIM2-210ENST00000429812 KAT6BQ8WYB5 2073 aa24.93■■□□□ 1.58
PDLIM2-210ENST00000429812 SLC15A2Q16348 729 aa24.93■■□□□ 1.58
PDLIM2-210ENST00000429812 SLC24A1O60721 1099 aa24.92■■□□□ 1.58
PDLIM2-210ENST00000429812 USHBP1Q8N6Y0 703 aa24.92■■□□□ 1.58
PDLIM2-210ENST00000429812 PCGF6Q9BYE7 350 aa24.92■■□□□ 1.58
PDLIM2-210ENST00000429812 RGPD2P0DJD1 1756 aa24.9■■□□□ 1.58
PDLIM2-210ENST00000429812 BTAF1O14981 1849 aa24.89■■□□□ 1.58
PDLIM2-210ENST00000429812 LRRC4BQ9NT99 713 aa24.89■■□□□ 1.58
PDLIM2-210ENST00000429812 NBPF6Q5VWK0 638 aa24.88■■□□□ 1.57
PDLIM2-210ENST00000429812 NBPF4Q96M43 638 aa24.88■■□□□ 1.57
PDLIM2-210ENST00000429812 PTGER2P43116 358 aa24.87■■□□□ 1.57
PDLIM2-210ENST00000429812 KCNQ4P56696 695 aa24.87■■□□□ 1.57
PDLIM2-210ENST00000429812 ZNF827Q17R98 1081 aa24.87■■□□□ 1.57
PDLIM2-210ENST00000429812 SYTL4Q96C24 671 aaPredicted RBP24.87■■□□□ 1.57
PDLIM2-210ENST00000429812 CARD14Q9BXL6 1004 aa24.87■■□□□ 1.57
PDLIM2-210ENST00000429812 FAM208AQ9UK61 1670 aaKnown RBP24.87■■□□□ 1.57
PDLIM2-210ENST00000429812 MEGF6O75095 1541 aa24.86■■□□□ 1.57
PDLIM2-210ENST00000429812 PRIM1P49642 420 aaKnown RBP24.85■■□□□ 1.57
PDLIM2-210ENST00000429812 HSP90AB2PQ58FF8 381 aa24.84■■□□□ 1.57
PDLIM2-210ENST00000429812 ZCRB1Q8TBF4 217 aaKnown RBP24.84■■□□□ 1.57
PDLIM2-210ENST00000429812 RTL1A6NKG5 1358 aa24.82■■□□□ 1.56
PDLIM2-210ENST00000429812 MYOM1P52179 1685 aa24.82■■□□□ 1.56
PDLIM2-210ENST00000429812 CDCA8Q53HL2 280 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms