RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 RGPD5Q99666 1765 aa17.15■□□□□ 0.34
ALMS1P1-201ENST00000428767 GCP02774 474 aa17.14■□□□□ 0.33
ALMS1P1-201ENST00000428767 COL18A1P39060 1754 aa17.13■□□□□ 0.33
ALMS1P1-201ENST00000428767 SLC15A2Q16348 729 aa17.13■□□□□ 0.33
ALMS1P1-201ENST00000428767 TXNRD1Q16881 649 aa17.13■□□□□ 0.33
ALMS1P1-201ENST00000428767 TOM1L2Q6ZVM7 507 aa17.13■□□□□ 0.33
ALMS1P1-201ENST00000428767 MARCH10Q8NA82 808 aaPredicted RBP17.13■□□□□ 0.33
ALMS1P1-201ENST00000428767 MTFR1LQ9H019 292 aa17.13■□□□□ 0.33
ALMS1P1-201ENST00000428767 GIGYF1O75420 1035 aaPredicted RBP17.12■□□□□ 0.33
ALMS1P1-201ENST00000428767 NLRP13Q86W25 1043 aa17.12■□□□□ 0.33
ALMS1P1-201ENST00000428767 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
ALMS1P1-201ENST00000428767 DCAF11Q8TEB1 546 aa17.11■□□□□ 0.33
ALMS1P1-201ENST00000428767 SGIP1Q9BQI5 828 aa17.11■□□□□ 0.33
ALMS1P1-201ENST00000428767 CCDC61Q9Y6R9 512 aa17.11■□□□□ 0.33
ALMS1P1-201ENST00000428767 ARXQ96QS3 562 aa17.1■□□□□ 0.33
ALMS1P1-201ENST00000428767 NHSQ6T4R5 1651 aa17.1■□□□□ 0.33
ALMS1P1-201ENST00000428767 PLEKHG3A1L390 1219 aa17.09■□□□□ 0.33
ALMS1P1-201ENST00000428767 GPR162Q16538 588 aa17.09■□□□□ 0.33
ALMS1P1-201ENST00000428767 SLIT3O75094 1523 aa17.09■□□□□ 0.33
ALMS1P1-201ENST00000428767 SHANK3Q9BYB0 1731 aa17.09■□□□□ 0.33
ALMS1P1-201ENST00000428767 PAPPAQ13219 1627 aa17.08■□□□□ 0.32
ALMS1P1-201ENST00000428767 PPIP5K1Q6PFW1 1433 aa17.08■□□□□ 0.32
ALMS1P1-201ENST00000428767 AATKQ6ZMQ8 1374 aa17.08■□□□□ 0.32
ALMS1P1-201ENST00000428767 PELP1Q8IZL8 1130 aaKnown RBP17.08■□□□□ 0.32
ALMS1P1-201ENST00000428767 KLHL34Q8N239 644 aa17.08■□□□□ 0.32
ALMS1P1-201ENST00000428767 PIK3C2AO00443 1686 aa17.07■□□□□ 0.32
ALMS1P1-201ENST00000428767 BCL9O00512 1426 aa17.06■□□□□ 0.32
ALMS1P1-201ENST00000428767 BTAF1O14981 1849 aa17.06■□□□□ 0.32
ALMS1P1-201ENST00000428767 MAP3K5Q99683 1374 aa17.05■□□□□ 0.32
ALMS1P1-201ENST00000428767 WDR17Q8IZU2 1322 aa17.05■□□□□ 0.32
ALMS1P1-201ENST00000428767 NLRP6P59044 892 aa17.05■□□□□ 0.32
ALMS1P1-201ENST00000428767 QRICH2Q9H0J4 1663 aa17.04■□□□□ 0.32
ALMS1P1-201ENST00000428767 AXIN2Q9Y2T1 843 aa17.04■□□□□ 0.32
ALMS1P1-201ENST00000428767 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
ALMS1P1-201ENST00000428767 ACSBG1Q96GR2 724 aa17.03■□□□□ 0.32
ALMS1P1-201ENST00000428767 CDCA7Q9BWT1 371 aaPredicted RBP17.03■□□□□ 0.32
ALMS1P1-201ENST00000428767 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
ALMS1P1-201ENST00000428767 CSB-PGBD3P0DP91 1061 aa17.02■□□□□ 0.32
ALMS1P1-201ENST00000428767 USP6P35125 1406 aa17.02■□□□□ 0.31
ALMS1P1-201ENST00000428767 CPSF1Q10570 1443 aaKnown RBP17.02■□□□□ 0.31
ALMS1P1-201ENST00000428767 TNS2Q63HR2 1409 aa17.02■□□□□ 0.31
ALMS1P1-201ENST00000428767 SOX12O15370 315 aa17.01■□□□□ 0.31
ALMS1P1-201ENST00000428767 ZNF827Q17R98 1081 aa17.01■□□□□ 0.31
ALMS1P1-201ENST00000428767 CABP2Q9NPB3 220 aa17.01■□□□□ 0.31
ALMS1P1-201ENST00000428767 QSER1Q2KHR3 1735 aa17.01■□□□□ 0.31
ALMS1P1-201ENST00000428767 EXOC5O00471 708 aa17■□□□□ 0.31
ALMS1P1-201ENST00000428767 KIAA1210Q9ULL0 1709 aa17■□□□□ 0.31
ALMS1P1-201ENST00000428767 TRPM1Q7Z4N2 1603 aa16.99■□□□□ 0.31
ALMS1P1-201ENST00000428767 COL24A1Q17RW2 1714 aa16.99■□□□□ 0.31
ALMS1P1-201ENST00000428767 CARD10Q9BWT7 1032 aa16.98■□□□□ 0.31
ALMS1P1-201ENST00000428767 BRD4O60885 1362 aaPredicted RBP16.98■□□□□ 0.31
ALMS1P1-201ENST00000428767 ABCC6O95255 1503 aa16.97■□□□□ 0.31
ALMS1P1-201ENST00000428767 NLGN2Q8NFZ4 835 aa16.97■□□□□ 0.31
ALMS1P1-201ENST00000428767 RAB3GAP2Q9H2M9 1393 aa16.97■□□□□ 0.31
ALMS1P1-201ENST00000428767 POLD1P28340 1107 aa16.95■□□□□ 0.3
ALMS1P1-201ENST00000428767 ARHGEF25Q86VW2 580 aa16.95■□□□□ 0.3
ALMS1P1-201ENST00000428767 STAC3Q96MF2 364 aa16.95■□□□□ 0.3
ALMS1P1-201ENST00000428767 CABP1Q9NZU7 370 aa16.95■□□□□ 0.3
ALMS1P1-201ENST00000428767 CCDC7Q96M83 1385 aa16.94■□□□□ 0.3
ALMS1P1-201ENST00000428767 LRRC4BQ9NT99 713 aa16.94■□□□□ 0.3
ALMS1P1-201ENST00000428767 NFAT5O94916 1531 aa16.93■□□□□ 0.3
ALMS1P1-201ENST00000428767 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
ALMS1P1-201ENST00000428767 NBPF1Q3BBV0 1214 aa16.92■□□□□ 0.3
ALMS1P1-201ENST00000428767 ATP10DQ9P241 1426 aa16.92■□□□□ 0.3
ALMS1P1-201ENST00000428767 LTN1O94822 1766 aa16.92■□□□□ 0.3
ALMS1P1-201ENST00000428767 YBX3P16989 372 aaKnown RBP eCLIP16.91■□□□□ 0.3
ALMS1P1-201ENST00000428767 PNPLA7Q6ZV29 1317 aa16.91■□□□□ 0.3
ALMS1P1-201ENST00000428767 KCNH5Q8NCM2 988 aa16.9■□□□□ 0.3
ALMS1P1-201ENST00000428767 AKT1S1Q96B36 256 aa16.9■□□□□ 0.3
ALMS1P1-201ENST00000428767 SLC16A10Q8TF71 515 aa16.89■□□□□ 0.29
ALMS1P1-201ENST00000428767 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
ALMS1P1-201ENST00000428767 KCNQ4P56696 695 aa16.88■□□□□ 0.29
ALMS1P1-201ENST00000428767 ZNF526Q8TF50 670 aaPredicted RBP16.87■□□□□ 0.29
ALMS1P1-201ENST00000428767 NLRP2Q9NX02 1062 aa16.87■□□□□ 0.29
ALMS1P1-201ENST00000428767 TFCP2L1Q9NZI6 479 aa16.87■□□□□ 0.29
ALMS1P1-201ENST00000428767 DOT1LQ8TEK3 1739 aa16.87■□□□□ 0.29
ALMS1P1-201ENST00000428767 GRIN3BO60391 1043 aa16.86■□□□□ 0.29
ALMS1P1-201ENST00000428767 LY75O60449 1722 aa16.86■□□□□ 0.29
ALMS1P1-201ENST00000428767 IL2RBP14784 551 aa16.85■□□□□ 0.29
ALMS1P1-201ENST00000428767 HSPA6P17066 643 aa16.85■□□□□ 0.29
ALMS1P1-201ENST00000428767 GPBP1L1Q9HC44 474 aaPredicted RBP16.85■□□□□ 0.29
ALMS1P1-201ENST00000428767 MON2Q7Z3U7 1717 aa16.84■□□□□ 0.29
ALMS1P1-201ENST00000428767 ERBB3P21860 1342 aa16.83■□□□□ 0.28
ALMS1P1-201ENST00000428767 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
ALMS1P1-201ENST00000428767 MSH5O43196 834 aa16.82■□□□□ 0.28
ALMS1P1-201ENST00000428767 SLC27A3Q5K4L6 730 aa16.82■□□□□ 0.28
ALMS1P1-201ENST00000428767 MSL1Q68DK7 614 aa16.81■□□□□ 0.28
ALMS1P1-201ENST00000428767 SYTL4Q96C24 671 aaPredicted RBP16.81■□□□□ 0.28
ALMS1P1-201ENST00000428767 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
ALMS1P1-201ENST00000428767 EVC2Q86UK5 1308 aa16.8■□□□□ 0.28
ALMS1P1-201ENST00000428767 DDX54Q8TDD1 881 aaKnown RBP16.8■□□□□ 0.28
ALMS1P1-201ENST00000428767 ADCY9O60503 1353 aa16.79■□□□□ 0.28
ALMS1P1-201ENST00000428767 KTN1Q86UP2 1357 aaKnown RBP16.79■□□□□ 0.28
ALMS1P1-201ENST00000428767 ANKRD24Q8TF21 1146 aa16.79■□□□□ 0.28
ALMS1P1-201ENST00000428767 ZNF692Q9BU19 519 aaPredicted RBP16.79■□□□□ 0.28
ALMS1P1-201ENST00000428767 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.28
ALMS1P1-201ENST00000428767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.77■□□□□ 0.28
ALMS1P1-201ENST00000428767 C5P01031 1676 aa16.77■□□□□ 0.28
ALMS1P1-201ENST00000428767 FAM208AQ9UK61 1670 aaKnown RBP16.77■□□□□ 0.28
ALMS1P1-201ENST00000428767 COL23A1Q86Y22 540 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 414.9 ms