RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
STRC-201ENST00000428650 PTPN23Q9H3S7 1636 aa17.1■□□□□ 0.33
STRC-201ENST00000428650 MAGEC2Q9UBF1 373 aaPredicted RBP17.1■□□□□ 0.33
STRC-201ENST00000428650 IQGAP2Q13576 1575 aa17.1■□□□□ 0.33
STRC-201ENST00000428650 HDGFL1Q5TGJ6 251 aa17.1■□□□□ 0.33
STRC-201ENST00000428650 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
STRC-201ENST00000428650 BCAR3O75815 825 aa17.09■□□□□ 0.33
STRC-201ENST00000428650 CFAP45Q9UL16 551 aa17.09■□□□□ 0.33
STRC-201ENST00000428650 NSD2O96028 1365 aa17.09■□□□□ 0.33
STRC-201ENST00000428650 EPS15P42566 896 aa17.09■□□□□ 0.33
STRC-201ENST00000428650 CTNNA3Q9UI47 895 aa17.09■□□□□ 0.33
STRC-201ENST00000428650 TATP17735 454 aaPredicted RBP17.09■□□□□ 0.33
STRC-201ENST00000428650 MCM4P33991 863 aa17.08■□□□□ 0.33
STRC-201ENST00000428650 AIMP1Q12904 312 aaKnown RBP17.08■□□□□ 0.33
STRC-201ENST00000428650 CC2D2AQ9P2K1 1620 aa17.08■□□□□ 0.33
STRC-201ENST00000428650 OFD1O75665 1012 aa17.08■□□□□ 0.33
STRC-201ENST00000428650 NFE2L2Q16236 605 aa17.08■□□□□ 0.33
STRC-201ENST00000428650 NKTRP30414 1462 aaKnown RBP17.08■□□□□ 0.32
STRC-201ENST00000428650 ABTB2Q8N961 1025 aa17.08■□□□□ 0.32
STRC-201ENST00000428650 NACAP1Q9BZK3 213 aa17.08■□□□□ 0.32
STRC-201ENST00000428650 NAP1L1P55209 391 aaKnown RBP17.07■□□□□ 0.32
STRC-201ENST00000428650 TRIM22Q8IYM9 498 aa17.07■□□□□ 0.32
STRC-201ENST00000428650 PDILTQ8N807 584 aa17.07■□□□□ 0.32
STRC-201ENST00000428650 PCF11O94913 1555 aaKnown RBP17.07■□□□□ 0.32
STRC-201ENST00000428650 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
STRC-201ENST00000428650 SMC2O95347 1197 aa17.07■□□□□ 0.32
STRC-201ENST00000428650 THEMISQ8N1K5 641 aaPredicted RBP17.07■□□□□ 0.32
STRC-201ENST00000428650 CAGE1Q8TC20 777 aa17.07■□□□□ 0.32
STRC-201ENST00000428650 TNMDQ9H2S6 317 aa17.07■□□□□ 0.32
STRC-201ENST00000428650 HMGB2P26583 209 aaKnown RBP17.07■□□□□ 0.32
STRC-201ENST00000428650 RNF214Q8ND24 703 aa17.06■□□□□ 0.32
STRC-201ENST00000428650 SLC12A5Q9H2X9 1139 aa17.06■□□□□ 0.32
STRC-201ENST00000428650 KIF2AO00139 706 aaPredicted RBP17.06■□□□□ 0.32
STRC-201ENST00000428650 TTC39AQ5SRH9 613 aa17.06■□□□□ 0.32
STRC-201ENST00000428650 ZNHIT6Q9NWK9 470 aaKnown RBP17.06■□□□□ 0.32
STRC-201ENST00000428650 SPG7Q9UQ90 795 aa17.06■□□□□ 0.32
STRC-201ENST00000428650 SNAPC4Q5SXM2 1469 aa17.06■□□□□ 0.32
STRC-201ENST00000428650 STIM1Q13586 685 aa17.06■□□□□ 0.32
STRC-201ENST00000428650 PDCL2Q8N4E4 241 aa17.05■□□□□ 0.32
STRC-201ENST00000428650 KIF14Q15058 1648 aa17.05■□□□□ 0.32
STRC-201ENST00000428650 CT47A1Q5JQC4 288 aaPredicted RBP17.05■□□□□ 0.32
STRC-201ENST00000428650 WASF1Q92558 559 aa17.05■□□□□ 0.32
STRC-201ENST00000428650 TSR2Q969E8 191 aaKnown RBP17.05■□□□□ 0.32
STRC-201ENST00000428650 NSD3Q9BZ95 1437 aa17.05■□□□□ 0.32
STRC-201ENST00000428650 DNAJC2Q99543 621 aaKnown RBP17.04■□□□□ 0.32
STRC-201ENST00000428650 CAMSAP2Q08AD1 1489 aa17.04■□□□□ 0.32
STRC-201ENST00000428650 FIBPO43427 364 aa17.04■□□□□ 0.32
STRC-201ENST00000428650 ERLIN1O75477 346 aa17.04■□□□□ 0.32
STRC-201ENST00000428650 SULT6B1Q6IMI4 303 aa17.04■□□□□ 0.32
STRC-201ENST00000428650 BLOC1S2Q6QNY1 142 aa17.04■□□□□ 0.32
STRC-201ENST00000428650 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
STRC-201ENST00000428650 NOL7Q9UMY1 257 aaKnown RBP17.04■□□□□ 0.32
STRC-201ENST00000428650 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
STRC-201ENST00000428650 SMTNL1A8MU46 457 aa17.03■□□□□ 0.32
STRC-201ENST00000428650 PDE4CQ08493 712 aa17.03■□□□□ 0.32
STRC-201ENST00000428650 CCDC27Q2M243 656 aa17.03■□□□□ 0.32
STRC-201ENST00000428650 NCOA1Q15788 1441 aa17.03■□□□□ 0.32
STRC-201ENST00000428650 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
STRC-201ENST00000428650 CEP57L1Q8IYX8 460 aa17.03■□□□□ 0.32
STRC-201ENST00000428650 CDK5RAP3Q96JB5 506 aa17.03■□□□□ 0.32
STRC-201ENST00000428650 PRM3Q9NNZ6 103 aa17.03■□□□□ 0.32
STRC-201ENST00000428650 CABP1Q9NZU7 370 aa17.03■□□□□ 0.32
STRC-201ENST00000428650 LARP1BQ659C4 914 aaKnown RBP17.02■□□□□ 0.32
STRC-201ENST00000428650 IQCEQ6IPM2 695 aa17.02■□□□□ 0.32
STRC-201ENST00000428650 CCDC112Q8NEF3 446 aa17.02■□□□□ 0.32
STRC-201ENST00000428650 TMPOP42166 694 aaKnown RBP17.02■□□□□ 0.32
STRC-201ENST00000428650 AEBP2Q6ZN18 517 aaPredicted RBP17.02■□□□□ 0.32
STRC-201ENST00000428650 PDRG1Q9NUG6 133 aa17.02■□□□□ 0.32
STRC-201ENST00000428650 ODF2Q5BJF6 829 aa17.02■□□□□ 0.32
STRC-201ENST00000428650 POGZQ7Z3K3 1410 aa17.02■□□□□ 0.32
STRC-201ENST00000428650 PPFIBP1Q86W92 1011 aa17.02■□□□□ 0.31
STRC-201ENST00000428650 RRP12Q5JTH9 1297 aaKnown RBP17.01■□□□□ 0.31
STRC-201ENST00000428650 EIF3JO75822 258 aaKnown RBP17.01■□□□□ 0.31
STRC-201ENST00000428650 ERLIN2O94905 339 aa17.01■□□□□ 0.31
STRC-201ENST00000428650 LEKR1Q6ZMV7 388 aa17.01■□□□□ 0.31
STRC-201ENST00000428650 SYTL4Q96C24 671 aaPredicted RBP17.01■□□□□ 0.31
STRC-201ENST00000428650 LAMC3Q9Y6N6 1575 aa17.01■□□□□ 0.31
STRC-201ENST00000428650 CCAR1Q8IX12 1150 aaKnown RBP17.01■□□□□ 0.31
STRC-201ENST00000428650 NUP62CLQ9H1M0 184 aa17■□□□□ 0.31
STRC-201ENST00000428650 FOSBP53539 338 aa17■□□□□ 0.31
STRC-201ENST00000428650 C1orf115Q9H7X2 142 aa17■□□□□ 0.31
STRC-201ENST00000428650 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
STRC-201ENST00000428650 THOC2Q8NI27 1593 aaKnown RBP17■□□□□ 0.31
STRC-201ENST00000428650 SERPINC1P01008 464 aa17■□□□□ 0.31
STRC-201ENST00000428650 LRPPRCP42704 1394 aaKnown RBP16.99■□□□□ 0.31
STRC-201ENST00000428650 RAD21O60216 631 aa16.99■□□□□ 0.31
STRC-201ENST00000428650 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
STRC-201ENST00000428650 SPATA32Q96LK8 384 aa16.99■□□□□ 0.31
STRC-201ENST00000428650 FAM135AQ9P2D6 1515 aa16.99■□□□□ 0.31
STRC-201ENST00000428650 CCDC57Q2TAC2 916 aa16.99■□□□□ 0.31
STRC-201ENST00000428650 FBXW7Q969H0 707 aa16.99■□□□□ 0.31
STRC-201ENST00000428650 NESP48681 1621 aa16.99■□□□□ 0.31
STRC-201ENST00000428650 KIF1BPQ96EK5 621 aa16.99■□□□□ 0.31
STRC-201ENST00000428650 ABCC5O15440 1437 aa16.99■□□□□ 0.31
STRC-201ENST00000428650 ESPNB1AK53 854 aa16.98■□□□□ 0.31
STRC-201ENST00000428650 RRP9O43818 475 aaKnown RBP16.98■□□□□ 0.31
STRC-201ENST00000428650 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
STRC-201ENST00000428650 CCDC69A6NI79 296 aa16.98■□□□□ 0.31
STRC-201ENST00000428650 CNNM1Q9NRU3 951 aa16.98■□□□□ 0.31
STRC-201ENST00000428650 ZSCAN30Q86W11 494 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms