RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PEAK1Q9H792 1746 aa22.1■■□□□ 1.13
SEC13-210ENST00000428626 R3HDM1Q15032 1099 aaKnown RBP22.09■■□□□ 1.13
SEC13-210ENST00000428626 WDR17Q8IZU2 1322 aa22.08■■□□□ 1.13
SEC13-210ENST00000428626 WNK3Q9BYP7 1800 aa22.08■■□□□ 1.13
SEC13-210ENST00000428626 TOM1L2Q6ZVM7 507 aa22.08■■□□□ 1.13
SEC13-210ENST00000428626 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.08■■□□□ 1.13
SEC13-210ENST00000428626 RREB1Q92766 1687 aa22.07■■□□□ 1.12
SEC13-210ENST00000428626 KCNH5Q8NCM2 988 aa22.07■■□□□ 1.12
SEC13-210ENST00000428626 SLC12A5Q9H2X9 1139 aa22.07■■□□□ 1.12
SEC13-210ENST00000428626 NME9Q86XW9 330 aa22.06■■□□□ 1.12
SEC13-210ENST00000428626 USP54Q70EL1 1684 aa22.06■■□□□ 1.12
SEC13-210ENST00000428626 USP31Q70CQ4 1352 aa22.05■■□□□ 1.12
SEC13-210ENST00000428626 NUP188Q5SRE5 1749 aa22.05■■□□□ 1.12
SEC13-210ENST00000428626 SBF2Q86WG5 1849 aa22.04■■□□□ 1.12
SEC13-210ENST00000428626 PTF1AQ7RTS3 328 aa22.04■■□□□ 1.12
SEC13-210ENST00000428626 TMC1Q8TDI8 760 aa22.04■■□□□ 1.12
SEC13-210ENST00000428626 TESK2Q96S53 571 aa22.04■■□□□ 1.12
SEC13-210ENST00000428626 PARD3Q8TEW0 1356 aa22.03■■□□□ 1.12
SEC13-210ENST00000428626 OVOS2A0A0G2JMS6 1433 aa22.03■■□□□ 1.12
SEC13-210ENST00000428626 OVOS2A0A0J9YW53 1432 aa22.03■■□□□ 1.12
SEC13-210ENST00000428626 OVOS2Q6IE36 1432 aa22.03■■□□□ 1.12
SEC13-210ENST00000428626 A0A1W2PP64 1363 aa22.02■■□□□ 1.12
SEC13-210ENST00000428626 DDB1Q16531 1140 aa22.02■■□□□ 1.12
SEC13-210ENST00000428626 TRIM26Q12899 539 aaPredicted RBP22.01■■□□□ 1.11
SEC13-210ENST00000428626 MARCH10Q8NA82 808 aaPredicted RBP22.01■■□□□ 1.11
SEC13-210ENST00000428626 CARD10Q9BWT7 1032 aa22.01■■□□□ 1.11
SEC13-210ENST00000428626 ST20-MTHFSA0A0A6YYL1 179 aa22■■□□□ 1.11
SEC13-210ENST00000428626 ABCC6O95255 1503 aa22■■□□□ 1.11
SEC13-210ENST00000428626 EDC4Q6P2E9 1401 aaKnown RBP21.99■■□□□ 1.11
SEC13-210ENST00000428626 CSB-PGBD3P0DP91 1061 aa21.99■■□□□ 1.11
SEC13-210ENST00000428626 LTN1O94822 1766 aa21.99■■□□□ 1.11
SEC13-210ENST00000428626 HDGFL2Q7Z4V5 671 aaPredicted RBP21.98■■□□□ 1.11
SEC13-210ENST00000428626 PUS7Q96PZ0 661 aaKnown RBP21.98■■□□□ 1.11
SEC13-210ENST00000428626 CDCA7Q9BWT1 371 aaPredicted RBP21.95■■□□□ 1.1
SEC13-210ENST00000428626 ERBB3P21860 1342 aa21.95■■□□□ 1.1
SEC13-210ENST00000428626 C11orf95C9JLR9 678 aaPredicted RBP21.94■■□□□ 1.1
SEC13-210ENST00000428626 TERF2IPQ9NYB0 399 aa21.94■■□□□ 1.1
SEC13-210ENST00000428626 CCDC7Q96M83 1385 aa21.94■■□□□ 1.1
SEC13-210ENST00000428626 BCL9O00512 1426 aa21.94■■□□□ 1.1
SEC13-210ENST00000428626 RGPD3A6NKT7 1758 aaPredicted RBP21.92■■□□□ 1.1
SEC13-210ENST00000428626 RGPD4Q7Z3J3 1758 aa21.92■■□□□ 1.1
SEC13-210ENST00000428626 BCL11BQ9C0K0 894 aaPredicted RBP21.92■■□□□ 1.1
SEC13-210ENST00000428626 PLSCR1O15162 318 aa21.91■■□□□ 1.1
SEC13-210ENST00000428626 PROM2Q8N271 834 aa21.91■■□□□ 1.1
SEC13-210ENST00000428626 TNS2Q63HR2 1409 aa21.9■■□□□ 1.1
SEC13-210ENST00000428626 EXOC5O00471 708 aa21.9■■□□□ 1.1
SEC13-210ENST00000428626 ANKRD24Q8TF21 1146 aa21.9■■□□□ 1.1
SEC13-210ENST00000428626 ANO8Q9HCE9 1232 aaPredicted RBP21.9■■□□□ 1.1
SEC13-210ENST00000428626 NLRP2Q9NX02 1062 aa21.9■■□□□ 1.1
SEC13-210ENST00000428626 FBLN1P23142 703 aa21.89■■□□□ 1.09
SEC13-210ENST00000428626 NINLQ9Y2I6 1382 aa21.88■■□□□ 1.09
SEC13-210ENST00000428626 NBPF14Q5TI25 921 aa21.88■■□□□ 1.09
SEC13-210ENST00000428626 KCNQ2O43526 872 aa21.87■■□□□ 1.09
SEC13-210ENST00000428626 USP47Q96K76 1375 aa21.87■■□□□ 1.09
SEC13-210ENST00000428626 IP6K1Q92551 441 aa21.85■■□□□ 1.09
SEC13-210ENST00000428626 ANKRD36BQ8N2N9 1353 aa21.85■■□□□ 1.09
SEC13-210ENST00000428626 IL2RBP14784 551 aa21.84■■□□□ 1.09
SEC13-210ENST00000428626 MAP3K19Q56UN5 1328 aa21.83■■□□□ 1.09
SEC13-210ENST00000428626 NHSQ6T4R5 1651 aa21.83■■□□□ 1.09
SEC13-210ENST00000428626 PDGFDQ9GZP0 370 aaPredicted RBP21.83■■□□□ 1.09
SEC13-210ENST00000428626 LTV1Q96GA3 475 aaPredicted RBP21.82■■□□□ 1.08
SEC13-210ENST00000428626 ACSBG1Q96GR2 724 aa21.82■■□□□ 1.08
SEC13-210ENST00000428626 COG3Q96JB2 828 aa21.81■■□□□ 1.08
SEC13-210ENST00000428626 CASZ1Q86V15 1759 aa21.81■■□□□ 1.08
SEC13-210ENST00000428626 RGPD2P0DJD1 1756 aa21.8■■□□□ 1.08
SEC13-210ENST00000428626 TXNRD1Q16881 649 aa21.8■■□□□ 1.08
SEC13-210ENST00000428626 FYB1O15117 783 aa21.79■■□□□ 1.08
SEC13-210ENST00000428626 SLC24A1O60721 1099 aa21.79■■□□□ 1.08
SEC13-210ENST00000428626 HOXC9P31274 260 aa21.79■■□□□ 1.08
SEC13-210ENST00000428626 TMF1P82094 1093 aa21.79■■□□□ 1.08
SEC13-210ENST00000428626 FAM208AQ9UK61 1670 aaKnown RBP21.79■■□□□ 1.08
SEC13-210ENST00000428626 GGNBP2Q9H3C7 697 aa21.78■■□□□ 1.08
SEC13-210ENST00000428626 KAT6BQ8WYB5 2073 aa21.76■■□□□ 1.07
SEC13-210ENST00000428626 BTAF1O14981 1849 aa21.76■■□□□ 1.07
SEC13-210ENST00000428626 RRS1Q15050 365 aaKnown RBP21.76■■□□□ 1.07
SEC13-210ENST00000428626 SPON1Q9HCB6 807 aa21.76■■□□□ 1.07
SEC13-210ENST00000428626 MYOM1P52179 1685 aa21.75■■□□□ 1.07
SEC13-210ENST00000428626 AMPHP49418 695 aa21.74■■□□□ 1.07
SEC13-210ENST00000428626 SHANK3Q9BYB0 1731 aa21.73■■□□□ 1.07
SEC13-210ENST00000428626 CARD14Q9BXL6 1004 aa21.73■■□□□ 1.07
SEC13-210ENST00000428626 PAPPAQ13219 1627 aa21.73■■□□□ 1.07
SEC13-210ENST00000428626 MEGF6O75095 1541 aa21.72■■□□□ 1.07
SEC13-210ENST00000428626 KIF20BQ96Q89 1820 aa21.72■■□□□ 1.07
SEC13-210ENST00000428626 SLC15A2Q16348 729 aa21.72■■□□□ 1.07
SEC13-210ENST00000428626 DDX54Q8TDD1 881 aaKnown RBP21.72■■□□□ 1.07
SEC13-210ENST00000428626 ZBTB7AO95365 584 aa21.71■■□□□ 1.07
SEC13-210ENST00000428626 PCGF6Q9BYE7 350 aa21.71■■□□□ 1.07
SEC13-210ENST00000428626 RTL1A6NKG5 1358 aa21.71■■□□□ 1.07
SEC13-210ENST00000428626 NBPF6Q5VWK0 638 aa21.7■■□□□ 1.06
SEC13-210ENST00000428626 NBPF4Q96M43 638 aa21.7■■□□□ 1.06
SEC13-210ENST00000428626 LRRC4BQ9NT99 713 aa21.7■■□□□ 1.06
SEC13-210ENST00000428626 STK32BQ9NY57 414 aa21.7■■□□□ 1.06
SEC13-210ENST00000428626 USHBP1Q8N6Y0 703 aa21.69■■□□□ 1.06
SEC13-210ENST00000428626 TIMELESSQ9UNS1 1208 aa21.69■■□□□ 1.06
SEC13-210ENST00000428626 PTGER2P43116 358 aa21.68■■□□□ 1.06
SEC13-210ENST00000428626 CDCA8Q53HL2 280 aa21.67■■□□□ 1.06
SEC13-210ENST00000428626 HSP90AB2PQ58FF8 381 aa21.67■■□□□ 1.06
SEC13-210ENST00000428626 PPP1R1BQ9UD71 204 aaPredicted RBP21.67■■□□□ 1.06
SEC13-210ENST00000428626 DOT1LQ8TEK3 1739 aa21.66■■□□□ 1.06
SEC13-210ENST00000428626 NSD3Q9BZ95 1437 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms