RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 SGSM3Q96HU1 749 aa4.83□□□□□ -1.64
CCDC30-203ENST00000428554 CDCA7Q9BWT1 371 aaPredicted RBP4.83□□□□□ -1.64
CCDC30-203ENST00000428554 CUEDC1Q9NWM3 386 aaPredicted RBP4.83□□□□□ -1.64
CCDC30-203ENST00000428554 NAALADL2Q58DX5 795 aa4.83□□□□□ -1.64
CCDC30-203ENST00000428554 NOM1Q5C9Z4 860 aaKnown RBP4.83□□□□□ -1.64
CCDC30-203ENST00000428554 TMTC2Q8N394 836 aa4.83□□□□□ -1.64
CCDC30-203ENST00000428554 PRR7Q8TB68 274 aa4.83□□□□□ -1.64
CCDC30-203ENST00000428554 ACTN4O43707 911 aaKnown RBP4.82□□□□□ -1.64
CCDC30-203ENST00000428554 CFAP70Q5T0N1 1121 aa4.82□□□□□ -1.64
CCDC30-203ENST00000428554 GLMNQ92990 594 aa4.82□□□□□ -1.64
CCDC30-203ENST00000428554 TERF2IPQ9NYB0 399 aa4.82□□□□□ -1.64
CCDC30-203ENST00000428554 LAS1LQ9Y4W2 734 aaKnown RBP4.82□□□□□ -1.64
CCDC30-203ENST00000428554 APLP1P51693 650 aa4.82□□□□□ -1.64
CCDC30-203ENST00000428554 AAMPQ13685 434 aa4.82□□□□□ -1.64
CCDC30-203ENST00000428554 KMT5BQ4FZB7 885 aa4.82□□□□□ -1.64
CCDC30-203ENST00000428554 BLOC1S3Q6QNY0 202 aa4.82□□□□□ -1.64
CCDC30-203ENST00000428554 RNF19BQ6ZMZ0 732 aa4.82□□□□□ -1.64
CCDC30-203ENST00000428554 DPH6Q7L8W6 267 aa4.82□□□□□ -1.64
CCDC30-203ENST00000428554 LARGE2Q8N3Y3 721 aa4.82□□□□□ -1.64
CCDC30-203ENST00000428554 GPATCH11Q8N954 259 aa4.82□□□□□ -1.64
CCDC30-203ENST00000428554 RALBP1Q15311 655 aa4.81□□□□□ -1.64
CCDC30-203ENST00000428554 NPAS4Q8IUM7 802 aa4.81□□□□□ -1.64
CCDC30-203ENST00000428554 WWC1Q8IX03 1113 aa4.81□□□□□ -1.64
CCDC30-203ENST00000428554 WNT2BQ93097 391 aa4.81□□□□□ -1.64
CCDC30-203ENST00000428554 ANKK1Q8NFD2 765 aa4.81□□□□□ -1.64
CCDC30-203ENST00000428554 HELBQ8NG08 1087 aaPredicted RBP4.81□□□□□ -1.64
CCDC30-203ENST00000428554 KCTD12Q96CX2 325 aaKnown RBP4.81□□□□□ -1.64
CCDC30-203ENST00000428554 HPS5Q9UPZ3 1129 aa4.81□□□□□ -1.64
CCDC30-203ENST00000428554 NDUFB9Q9Y6M9 179 aa4.81□□□□□ -1.64
CCDC30-203ENST00000428554 A0A0U1RQG5 324 aaPredicted RBP4.81□□□□□ -1.64
CCDC30-203ENST00000428554 TLDC2A0PJX2 215 aa4.81□□□□□ -1.64
CCDC30-203ENST00000428554 SOWAHBA6NEL2 793 aa4.81□□□□□ -1.64
CCDC30-203ENST00000428554 ZEB1P37275 1124 aaPredicted RBP4.81□□□□□ -1.64
CCDC30-203ENST00000428554 B4GALNT3Q6L9W6 998 aa4.81□□□□□ -1.64
CCDC30-203ENST00000428554 ADAMTS19Q8TE59 1207 aa4.81□□□□□ -1.64
CCDC30-203ENST00000428554 SBNO2Q9Y2G9 1366 aa4.8□□□□□ -1.64
CCDC30-203ENST00000428554 EGFLAMQ63HQ2 1017 aa4.8□□□□□ -1.64
CCDC30-203ENST00000428554 CECR2Q9BXF3 1484 aa4.8□□□□□ -1.64
CCDC30-203ENST00000428554 ATG7O95352 703 aa4.8□□□□□ -1.64
CCDC30-203ENST00000428554 NR6A1Q15406 480 aa4.8□□□□□ -1.64
CCDC30-203ENST00000428554 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.79□□□□□ -1.64
CCDC30-203ENST00000428554 PPP4CP60510 307 aa4.79□□□□□ -1.64
CCDC30-203ENST00000428554 RETREG3Q86VR2 466 aa4.79□□□□□ -1.64
CCDC30-203ENST00000428554 BCL2L13Q9BXK5 485 aa4.79□□□□□ -1.64
CCDC30-203ENST00000428554 PRDM10Q9NQV6 1147 aa4.79□□□□□ -1.64
CCDC30-203ENST00000428554 THSD4Q6ZMP0 1018 aa4.79□□□□□ -1.64
CCDC30-203ENST00000428554 HCSTQ9UBK5 93 aa4.79□□□□□ -1.64
CCDC30-203ENST00000428554 PSME1Q06323 249 aa4.78□□□□□ -1.64
CCDC30-203ENST00000428554 VAC14Q08AM6 782 aa4.78□□□□□ -1.64
CCDC30-203ENST00000428554 GPATCH3Q96I76 525 aa4.78□□□□□ -1.64
CCDC30-203ENST00000428554 PRM3Q9NNZ6 103 aa4.78□□□□□ -1.64
CCDC30-203ENST00000428554 WBP1LQ9NX94 342 aa4.78□□□□□ -1.64
CCDC30-203ENST00000428554 TMA7Q9Y2S6 64 aaKnown RBP4.78□□□□□ -1.64
CCDC30-203ENST00000428554 BRICD5Q6PL45 260 aa4.78□□□□□ -1.64
CCDC30-203ENST00000428554 APBB1IPQ7Z5R6 666 aaPredicted RBP4.78□□□□□ -1.64
CCDC30-203ENST00000428554 SCUBE3Q8IX30 993 aa4.78□□□□□ -1.64
CCDC30-203ENST00000428554 KCNB2Q92953 911 aa4.78□□□□□ -1.64
CCDC30-203ENST00000428554 TSR3Q9UJK0 312 aaKnown RBP4.78□□□□□ -1.64
CCDC30-203ENST00000428554 CCDC194A0A1B0GVG4 234 aa4.78□□□□□ -1.64
CCDC30-203ENST00000428554 THAP11Q96EK4 314 aa4.78□□□□□ -1.64
CCDC30-203ENST00000428554 PPFIA4O75335 1185 aa4.77□□□□□ -1.65
CCDC30-203ENST00000428554 Q3C1V9 767 aa4.77□□□□□ -1.65
CCDC30-203ENST00000428554 ARMC5Q96C12 935 aa4.77□□□□□ -1.65
CCDC30-203ENST00000428554 MAF1Q9H063 256 aa4.77□□□□□ -1.65
CCDC30-203ENST00000428554 PCDHB3Q9Y5E6 796 aa4.77□□□□□ -1.65
CCDC30-203ENST00000428554 SPATA31D1Q6ZQQ2 1576 aa4.77□□□□□ -1.65
CCDC30-203ENST00000428554 HDGFL1Q5TGJ6 251 aa4.77□□□□□ -1.65
CCDC30-203ENST00000428554 CCER1Q8TC90 406 aaPredicted RBP4.77□□□□□ -1.65
CCDC30-203ENST00000428554 USB1Q9BQ65 265 aaKnown RBP4.77□□□□□ -1.65
CCDC30-203ENST00000428554 CARNS1A5YM72 827 aa4.76□□□□□ -1.65
CCDC30-203ENST00000428554 RECKO95980 971 aa4.76□□□□□ -1.65
CCDC30-203ENST00000428554 LONRF3Q496Y0 759 aa4.76□□□□□ -1.65
CCDC30-203ENST00000428554 LYPD8Q6UX82 237 aa4.76□□□□□ -1.65
CCDC30-203ENST00000428554 MAP4K4O95819 1239 aaPredicted RBP4.76□□□□□ -1.65
CCDC30-203ENST00000428554 PTPN5P54829 565 aa4.76□□□□□ -1.65
CCDC30-203ENST00000428554 CNPY4Q8N129 248 aa4.76□□□□□ -1.65
CCDC30-203ENST00000428554 IGBP1P78318 339 aa4.76□□□□□ -1.65
CCDC30-203ENST00000428554 PTPROQ16827 1216 aa4.76□□□□□ -1.65
CCDC30-203ENST00000428554 DESI1Q6ICB0 168 aa4.76□□□□□ -1.65
CCDC30-203ENST00000428554 PRR14Q9BWN1 585 aa4.76□□□□□ -1.65
CCDC30-203ENST00000428554 TBX22Q9Y458 520 aa4.76□□□□□ -1.65
CCDC30-203ENST00000428554 PARNO95453 639 aaKnown RBP4.75□□□□□ -1.65
CCDC30-203ENST00000428554 MARSP56192 900 aaKnown RBP4.75□□□□□ -1.65
CCDC30-203ENST00000428554 COPS2P61201 443 aa4.75□□□□□ -1.65
CCDC30-203ENST00000428554 CLEC4GQ6UXB4 293 aa4.75□□□□□ -1.65
CCDC30-203ENST00000428554 NYAP1Q6ZVC0 841 aa4.75□□□□□ -1.65
CCDC30-203ENST00000428554 GIPC2Q8TF65 315 aa4.75□□□□□ -1.65
CCDC30-203ENST00000428554 MAP10Q9P2G4 905 aa4.75□□□□□ -1.65
CCDC30-203ENST00000428554 FAM50AQ14320 339 aaKnown RBP4.75□□□□□ -1.65
CCDC30-203ENST00000428554 SDE2Q6IQ49 451 aa4.75□□□□□ -1.65
CCDC30-203ENST00000428554 FAM160A2Q8N612 972 aaPredicted RBP4.75□□□□□ -1.65
CCDC30-203ENST00000428554 SLC43A3Q8NBI5 491 aa4.75□□□□□ -1.65
CCDC30-203ENST00000428554 SPACA7Q96KW9 195 aa4.75□□□□□ -1.65
CCDC30-203ENST00000428554 LNPKQ9C0E8 428 aa4.75□□□□□ -1.65
CCDC30-203ENST00000428554 PRDM9Q9NQV7 894 aa4.75□□□□□ -1.65
CCDC30-203ENST00000428554 FAN1Q9Y2M0 1017 aa4.75□□□□□ -1.65
CCDC30-203ENST00000428554 SALL2Q9Y467 1007 aaPredicted RBP4.75□□□□□ -1.65
CCDC30-203ENST00000428554 EXOC5O00471 708 aa4.74□□□□□ -1.65
CCDC30-203ENST00000428554 FMNL1O95466 1100 aaPredicted RBP4.74□□□□□ -1.65
CCDC30-203ENST00000428554 ARID4AP29374 1257 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms