RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TXLNBQ8N3L3 684 aa6.81□□□□□ -1.32
HERC4-206ENST00000427635 NF2P35240 595 aa6.81□□□□□ -1.32
HERC4-206ENST00000427635 BCL2L13Q9BXK5 485 aa6.81□□□□□ -1.32
HERC4-206ENST00000427635 C1orf115Q9H7X2 142 aa6.81□□□□□ -1.32
HERC4-206ENST00000427635 STIM1Q13586 685 aa6.81□□□□□ -1.32
HERC4-206ENST00000427635 SPTY2D1Q68D10 685 aaPredicted RBP6.81□□□□□ -1.32
HERC4-206ENST00000427635 CCER2I3L3R5 266 aa6.8□□□□□ -1.32
HERC4-206ENST00000427635 CUL5Q93034 780 aa6.8□□□□□ -1.32
HERC4-206ENST00000427635 LUC7LQ9NQ29 371 aaKnown RBP6.8□□□□□ -1.32
HERC4-206ENST00000427635 BMP2KQ9NSY1 1161 aaPredicted RBP6.8□□□□□ -1.32
HERC4-206ENST00000427635 EZRP15311 586 aaKnown RBP6.8□□□□□ -1.32
HERC4-206ENST00000427635 GBP2P32456 591 aaPredicted RBP6.8□□□□□ -1.32
HERC4-206ENST00000427635 ADAMTS2O95450 1211 aa6.8□□□□□ -1.32
HERC4-206ENST00000427635 PANK3Q9H999 370 aa6.8□□□□□ -1.32
HERC4-206ENST00000427635 SH3BP5O60239 455 aa6.8□□□□□ -1.32
HERC4-206ENST00000427635 ANKIB1Q9P2G1 1089 aa6.8□□□□□ -1.32
HERC4-206ENST00000427635 DDX19BQ9UMR2 479 aa6.8□□□□□ -1.32
HERC4-206ENST00000427635 BIN2Q9UBW5 565 aaPredicted RBP6.8□□□□□ -1.32
HERC4-206ENST00000427635 RAPGEF2Q9Y4G8 1499 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 TPD52L2O43399 206 aaKnown RBP6.79□□□□□ -1.32
HERC4-206ENST00000427635 MAPK8IP2Q13387 824 aaPredicted RBP6.79□□□□□ -1.32
HERC4-206ENST00000427635 STK11IPQ8N1F8 1099 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 RAI14Q9P0K7 980 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 INTS3Q68E01 1043 aaKnown RBP6.79□□□□□ -1.32
HERC4-206ENST00000427635 PDILTQ8N807 584 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 NOL7Q9UMY1 257 aaKnown RBP6.79□□□□□ -1.32
HERC4-206ENST00000427635 ST20-MTHFSA0A0A6YYL1 179 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 VPS37CA5D8V6 355 aaPredicted RBP6.79□□□□□ -1.32
HERC4-206ENST00000427635 MTHFSP49914 203 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 LRSAM1Q6UWE0 723 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 TRIM22Q8IYM9 498 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 TANGO6Q9C0B7 1094 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 ZNF219Q9P2Y4 722 aaPredicted RBP6.79□□□□□ -1.32
HERC4-206ENST00000427635 EPB41L2O43491 1005 aaKnown RBP6.79□□□□□ -1.32
HERC4-206ENST00000427635 POLR3DP05423 398 aaPredicted RBP6.79□□□□□ -1.32
HERC4-206ENST00000427635 ARID4AP29374 1257 aaPredicted RBP6.79□□□□□ -1.32
HERC4-206ENST00000427635 USP5P45974 858 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 ST5P78524 1137 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 TEX35Q5T0J7 233 aa6.79□□□□□ -1.32
HERC4-206ENST00000427635 HMOX1P09601 288 aa6.78□□□□□ -1.32
HERC4-206ENST00000427635 SKOR2Q2VWA4 1001 aaPredicted RBP6.78□□□□□ -1.32
HERC4-206ENST00000427635 CAVIN4Q5BKX8 364 aa6.78□□□□□ -1.32
HERC4-206ENST00000427635 SEPT11Q9NVA2 429 aaKnown RBP6.78□□□□□ -1.32
HERC4-206ENST00000427635 ARHGAP5Q13017 1502 aa6.78□□□□□ -1.32
HERC4-206ENST00000427635 MYO15BQ96JP2 1530 aa6.78□□□□□ -1.32
HERC4-206ENST00000427635 CADPSQ9ULU8 1353 aa6.78□□□□□ -1.32
HERC4-206ENST00000427635 LRPPRCP42704 1394 aaKnown RBP6.78□□□□□ -1.32
HERC4-206ENST00000427635 MAFGO15525 162 aa6.78□□□□□ -1.32
HERC4-206ENST00000427635 TMOD3Q9NYL9 352 aa6.78□□□□□ -1.32
HERC4-206ENST00000427635 SEC63Q9UGP8 760 aaKnown RBP6.78□□□□□ -1.32
HERC4-206ENST00000427635 GOLIM4O00461 696 aa6.78□□□□□ -1.32
HERC4-206ENST00000427635 FERMT2Q96AC1 680 aa6.78□□□□□ -1.32
HERC4-206ENST00000427635 ZNHIT6Q9NWK9 470 aaKnown RBP6.78□□□□□ -1.32
HERC4-206ENST00000427635 MYBBP1AQ9BQG0 1328 aaKnown RBP6.78□□□□□ -1.32
HERC4-206ENST00000427635 LMOD1P29536 600 aaPredicted RBP6.78□□□□□ -1.32
HERC4-206ENST00000427635 SSR1P43307 286 aaKnown RBP6.78□□□□□ -1.32
HERC4-206ENST00000427635 HMGN5P82970 282 aaKnown RBP6.78□□□□□ -1.32
HERC4-206ENST00000427635 CLASRPQ8N2M8 674 aaKnown RBP6.78□□□□□ -1.32
HERC4-206ENST00000427635 CCDC191Q8NCU4 936 aa6.78□□□□□ -1.32
HERC4-206ENST00000427635 RBM27Q9P2N5 1060 aaKnown RBP6.78□□□□□ -1.32
HERC4-206ENST00000427635 SSX2IPQ9Y2D8 614 aa6.78□□□□□ -1.32
HERC4-206ENST00000427635 TOM1O60784 492 aa6.77□□□□□ -1.33
HERC4-206ENST00000427635 ARMCX6Q7L4S7 300 aa6.77□□□□□ -1.33
HERC4-206ENST00000427635 ERCC4Q92889 916 aaPredicted RBP6.77□□□□□ -1.33
HERC4-206ENST00000427635 COMMD10Q9Y6G5 202 aa6.77□□□□□ -1.33
HERC4-206ENST00000427635 TDO2P48775 406 aa6.77□□□□□ -1.33
HERC4-206ENST00000427635 ATF7IPQ6VMQ6 1270 aa6.77□□□□□ -1.33
HERC4-206ENST00000427635 LRP2BPQ9P2M1 347 aa6.77□□□□□ -1.33
HERC4-206ENST00000427635 CETN2P41208 172 aa6.77□□□□□ -1.33
HERC4-206ENST00000427635 ZNF396Q96N95 335 aaPredicted RBP6.77□□□□□ -1.33
HERC4-206ENST00000427635 HDAC9Q9UKV0 1011 aa6.77□□□□□ -1.33
HERC4-206ENST00000427635 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.77□□□□□ -1.33
HERC4-206ENST00000427635 PPP1R12BO60237 982 aaPredicted RBP6.77□□□□□ -1.33
HERC4-206ENST00000427635 MRPS9P82933 396 aaKnown RBP6.77□□□□□ -1.33
HERC4-206ENST00000427635 CCDC181Q5TID7 509 aa6.77□□□□□ -1.33
HERC4-206ENST00000427635 CCDC112Q8NEF3 446 aa6.77□□□□□ -1.33
HERC4-206ENST00000427635 NUP133Q8WUM0 1156 aa6.77□□□□□ -1.33
HERC4-206ENST00000427635 ATP2B1P20020 1258 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 RRP9O43818 475 aaKnown RBP6.76□□□□□ -1.33
HERC4-206ENST00000427635 PEX14O75381 377 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 GNAI3P08754 354 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 RUNDC1Q96C34 613 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 MAP7D2Q96T17 732 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 FEZ1Q99689 392 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 DACH1Q9UI36 760 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 SSBP05455 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
HERC4-206ENST00000427635 DEF6Q9H4E7 631 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 KIF7Q2M1P5 1343 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 FHOD3Q2V2M9 1422 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 MYL6BP14649 208 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 STAC3Q96MF2 364 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 UBAC1Q9BSL1 405 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 FANCD2Q9BXW9 1451 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 UBAP1LF5GYI3 381 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 SMC2O95347 1197 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 SKIDA1Q1XH10 827 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 DZIP1Q86YF9 867 aaKnown RBP6.76□□□□□ -1.33
HERC4-206ENST00000427635 LRRC45Q96CN5 670 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 CABP2Q9NPB3 220 aa6.76□□□□□ -1.33
HERC4-206ENST00000427635 ENOX2Q16206 610 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms