RNA–Protein interactions for RNA: ENST00000426687.2

SHANK2-208, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-208ENST00000426687 CRB1P82279 1406 aa13.35□□□□□ -0.27
SHANK2-208ENST00000426687 WDR90Q96KV7 1748 aa13.35□□□□□ -0.27
SHANK2-208ENST00000426687 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
SHANK2-208ENST00000426687 PAK3O75914 559 aaPredicted RBP13.33□□□□□ -0.28
SHANK2-208ENST00000426687 TULP4Q9NRJ4 1543 aa13.33□□□□□ -0.28
SHANK2-208ENST00000426687 ANKRD30BQ9BXX2 1392 aa13.32□□□□□ -0.28
SHANK2-208ENST00000426687 MARCH10Q8NA82 808 aaPredicted RBP13.32□□□□□ -0.28
SHANK2-208ENST00000426687 WWC3Q9ULE0 1092 aa13.32□□□□□ -0.28
SHANK2-208ENST00000426687 QSER1Q2KHR3 1735 aa13.32□□□□□ -0.28
SHANK2-208ENST00000426687 TOMM70O94826 608 aa13.31□□□□□ -0.28
SHANK2-208ENST00000426687 ZNF827Q17R98 1081 aa13.31□□□□□ -0.28
SHANK2-208ENST00000426687 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
SHANK2-208ENST00000426687 PRR36Q9H6K5 1346 aa13.31□□□□□ -0.28
SHANK2-208ENST00000426687 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
SHANK2-208ENST00000426687 NGDNQ8NEJ9 315 aaKnown RBP13.29□□□□□ -0.28
SHANK2-208ENST00000426687 PRAM1Q96QH2 718 aa13.29□□□□□ -0.28
SHANK2-208ENST00000426687 WNK3Q9BYP7 1800 aa13.29□□□□□ -0.28
SHANK2-208ENST00000426687 PCNTO95613 3336 aa13.29□□□□□ -0.28
SHANK2-208ENST00000426687 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
SHANK2-208ENST00000426687 ARHGEF28Q8N1W1 1705 aaKnown RBP13.28□□□□□ -0.28
SHANK2-208ENST00000426687 SAFB2Q14151 953 aaKnown RBP eCLIP13.27□□□□□ -0.29
SHANK2-208ENST00000426687 CDCA7Q9BWT1 371 aaPredicted RBP13.27□□□□□ -0.29
SHANK2-208ENST00000426687 USP19O94966 1318 aa13.27□□□□□ -0.29
SHANK2-208ENST00000426687 BRD4O60885 1362 aaPredicted RBP13.27□□□□□ -0.29
SHANK2-208ENST00000426687 PNPLA7Q6ZV29 1317 aa13.26□□□□□ -0.29
SHANK2-208ENST00000426687 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
SHANK2-208ENST00000426687 SPATA31E1Q6ZUB1 1445 aa13.25□□□□□ -0.29
SHANK2-208ENST00000426687 NUTM2GQ5VZR2 741 aa13.23□□□□□ -0.29
SHANK2-208ENST00000426687 C14orf93Q9H972 538 aaKnown RBP13.23□□□□□ -0.29
SHANK2-208ENST00000426687 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
SHANK2-208ENST00000426687 HTRA3P83110 453 aa13.22□□□□□ -0.29
SHANK2-208ENST00000426687 LRRC4BQ9NT99 713 aa13.22□□□□□ -0.29
SHANK2-208ENST00000426687 POGKQ9P215 609 aa13.22□□□□□ -0.29
SHANK2-208ENST00000426687 TNS2Q63HR2 1409 aa13.22□□□□□ -0.29
SHANK2-208ENST00000426687 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
SHANK2-208ENST00000426687 CD2APQ9Y5K6 639 aa13.21□□□□□ -0.29
SHANK2-208ENST00000426687 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.3
SHANK2-208ENST00000426687 WASLO00401 505 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-208ENST00000426687 HSPA1AP0DMV8 641 aaKnown RBP13.2□□□□□ -0.3
SHANK2-208ENST00000426687 HSPA1BP0DMV9 641 aaKnown RBP13.2□□□□□ -0.3
SHANK2-208ENST00000426687 TOM1L2Q6ZVM7 507 aa13.2□□□□□ -0.3
SHANK2-208ENST00000426687 HIRIP3Q9BW71 556 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-208ENST00000426687 POLR3AO14802 1390 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-208ENST00000426687 TUBGCP6Q96RT7 1819 aa13.19□□□□□ -0.3
SHANK2-208ENST00000426687 GCP02774 474 aa13.19□□□□□ -0.3
SHANK2-208ENST00000426687 WDR17Q8IZU2 1322 aa13.18□□□□□ -0.3
SHANK2-208ENST00000426687 TRPM1Q7Z4N2 1603 aa13.18□□□□□ -0.3
SHANK2-208ENST00000426687 FSTL1Q12841 308 aa13.18□□□□□ -0.3
SHANK2-208ENST00000426687 SLC27A3Q5K4L6 730 aa13.18□□□□□ -0.3
SHANK2-208ENST00000426687 USP6P35125 1406 aa13.18□□□□□ -0.3
SHANK2-208ENST00000426687 ABCC6O95255 1503 aa13.18□□□□□ -0.3
SHANK2-208ENST00000426687 BTAF1O14981 1849 aa13.18□□□□□ -0.3
SHANK2-208ENST00000426687 RGL3Q3MIN7 710 aa13.17□□□□□ -0.3
SHANK2-208ENST00000426687 MINK1Q8N4C8 1332 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-208ENST00000426687 EXOC5O00471 708 aa13.16□□□□□ -0.3
SHANK2-208ENST00000426687 ABTB2Q8N961 1025 aa13.16□□□□□ -0.3
SHANK2-208ENST00000426687 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
SHANK2-208ENST00000426687 CFAP70Q5T0N1 1121 aa13.15□□□□□ -0.3
SHANK2-208ENST00000426687 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
SHANK2-208ENST00000426687 ITGAEP38570 1179 aa13.14□□□□□ -0.31
SHANK2-208ENST00000426687 NLRP13Q86W25 1043 aa13.14□□□□□ -0.31
SHANK2-208ENST00000426687 ACSBG1Q96GR2 724 aa13.14□□□□□ -0.31
SHANK2-208ENST00000426687 NMRK2Q9NPI5 230 aa13.14□□□□□ -0.31
SHANK2-208ENST00000426687 COL18A1P39060 1754 aa13.14□□□□□ -0.31
SHANK2-208ENST00000426687 SLIT3O75094 1523 aa13.13□□□□□ -0.31
SHANK2-208ENST00000426687 FAM161AQ3B820 660 aa13.13□□□□□ -0.31
SHANK2-208ENST00000426687 NUDT16Q96DE0 195 aaKnown RBP13.13□□□□□ -0.31
SHANK2-208ENST00000426687 CARD10Q9BWT7 1032 aa13.13□□□□□ -0.31
SHANK2-208ENST00000426687 C10orf71Q711Q0 1435 aa13.12□□□□□ -0.31
SHANK2-208ENST00000426687 ACEP12821 1306 aa13.12□□□□□ -0.31
SHANK2-208ENST00000426687 IGSF1Q8N6C5 1336 aa13.12□□□□□ -0.31
SHANK2-208ENST00000426687 CCDC7Q96M83 1385 aa13.11□□□□□ -0.31
SHANK2-208ENST00000426687 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
SHANK2-208ENST00000426687 PPIP5K1Q6PFW1 1433 aa13.11□□□□□ -0.31
SHANK2-208ENST00000426687 C16orf71Q8IYS4 520 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-208ENST00000426687 CPSF1Q10570 1443 aaKnown RBP13.09□□□□□ -0.31
SHANK2-208ENST00000426687 AXIN2Q9Y2T1 843 aa13.09□□□□□ -0.31
SHANK2-208ENST00000426687 PIK3C2AO00443 1686 aa13.08□□□□□ -0.31
SHANK2-208ENST00000426687 PLEKHG3A1L390 1219 aa13.08□□□□□ -0.32
SHANK2-208ENST00000426687 ZBTB7CA1YPR0 619 aa13.08□□□□□ -0.32
SHANK2-208ENST00000426687 MSL1Q68DK7 614 aa13.08□□□□□ -0.32
SHANK2-208ENST00000426687 COL23A1Q86Y22 540 aaPredicted RBP13.08□□□□□ -0.32
SHANK2-208ENST00000426687 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
SHANK2-208ENST00000426687 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
SHANK2-208ENST00000426687 PLEKHG2Q9H7P9 1386 aa13.06□□□□□ -0.32
SHANK2-208ENST00000426687 MSH5O43196 834 aa13.05□□□□□ -0.32
SHANK2-208ENST00000426687 PRDM10Q9NQV6 1147 aa13.05□□□□□ -0.32
SHANK2-208ENST00000426687 LY75O60449 1722 aa13.05□□□□□ -0.32
SHANK2-208ENST00000426687 KIAA1210Q9ULL0 1709 aa13.05□□□□□ -0.32
SHANK2-208ENST00000426687 PXDNLA1KZ92 1463 aa13.04□□□□□ -0.32
SHANK2-208ENST00000426687 CSB-PGBD3P0DP91 1061 aa13.04□□□□□ -0.32
SHANK2-208ENST00000426687 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
SHANK2-208ENST00000426687 KCNQ4P56696 695 aa13.03□□□□□ -0.32
SHANK2-208ENST00000426687 MLLT1Q03111 559 aaPredicted RBP13.02□□□□□ -0.33
SHANK2-208ENST00000426687 ARHGEF25Q86VW2 580 aa13.02□□□□□ -0.33
SHANK2-208ENST00000426687 CDK19Q9BWU1 502 aa13.01□□□□□ -0.33
SHANK2-208ENST00000426687 QRICH2Q9H0J4 1663 aa13□□□□□ -0.33
SHANK2-208ENST00000426687 TNRC6CQ9HCJ0 1690 aaKnown RBP13□□□□□ -0.33
SHANK2-208ENST00000426687 KDM2BQ8NHM5 1336 aa13□□□□□ -0.33
SHANK2-208ENST00000426687 RGS19P49795 217 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms