RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 SLIT3O75094 1523 aa19.89■□□□□ 0.77
GINS3-203ENST00000426538 NFAT5O94916 1531 aa19.89■□□□□ 0.77
GINS3-203ENST00000426538 IP6K1Q92551 441 aa19.89■□□□□ 0.77
GINS3-203ENST00000426538 RSPH6AQ9H0K4 717 aa19.89■□□□□ 0.77
GINS3-203ENST00000426538 RTL1A6NKG5 1358 aa19.89■□□□□ 0.77
GINS3-203ENST00000426538 PRKAR2BP31323 418 aa19.88■□□□□ 0.77
GINS3-203ENST00000426538 ARHGEF25Q86VW2 580 aa19.88■□□□□ 0.77
GINS3-203ENST00000426538 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
GINS3-203ENST00000426538 RRP7AQ9Y3A4 280 aaKnown RBP19.87■□□□□ 0.77
GINS3-203ENST00000426538 LTN1O94822 1766 aa19.86■□□□□ 0.77
GINS3-203ENST00000426538 TOM1O60784 492 aa19.86■□□□□ 0.77
GINS3-203ENST00000426538 GOLGA2Q08379 1002 aa19.86■□□□□ 0.77
GINS3-203ENST00000426538 SULT6B1Q6IMI4 303 aa19.86■□□□□ 0.77
GINS3-203ENST00000426538 ZC3H6P61129 1189 aaKnown RBP19.85■□□□□ 0.77
GINS3-203ENST00000426538 WWC1Q8IX03 1113 aa19.85■□□□□ 0.77
GINS3-203ENST00000426538 CABLES1Q8TDN4 633 aa19.85■□□□□ 0.77
GINS3-203ENST00000426538 LTV1Q96GA3 475 aaPredicted RBP19.85■□□□□ 0.77
GINS3-203ENST00000426538 ZNF521Q96K83 1311 aa19.84■□□□□ 0.77
GINS3-203ENST00000426538 TMPOP42166 694 aaKnown RBP19.84■□□□□ 0.77
GINS3-203ENST00000426538 CCDC27Q2M243 656 aa19.84■□□□□ 0.77
GINS3-203ENST00000426538 CDCA7LQ96GN5 454 aa19.84■□□□□ 0.77
GINS3-203ENST00000426538 IQSEC2Q5JU85 1478 aa19.83■□□□□ 0.77
GINS3-203ENST00000426538 MED1Q15648 1581 aaPredicted RBP19.83■□□□□ 0.76
GINS3-203ENST00000426538 NHSL1Q5SYE7 1610 aa19.83■□□□□ 0.76
GINS3-203ENST00000426538 EYA1Q99502 592 aa19.82■□□□□ 0.76
GINS3-203ENST00000426538 HAP1P54257 671 aaPredicted RBP19.82■□□□□ 0.76
GINS3-203ENST00000426538 RIPK4P57078 832 aa19.82■□□□□ 0.76
GINS3-203ENST00000426538 LRRC59Q96AG4 307 aaKnown RBP19.82■□□□□ 0.76
GINS3-203ENST00000426538 ROBO1Q9Y6N7 1651 aa19.82■□□□□ 0.76
GINS3-203ENST00000426538 AEBP1Q8IUX7 1158 aa19.8■□□□□ 0.76
GINS3-203ENST00000426538 PHACTR3Q96KR7 559 aa19.8■□□□□ 0.76
GINS3-203ENST00000426538 GTF3C3Q9Y5Q9 886 aa19.8■□□□□ 0.76
GINS3-203ENST00000426538 PHRF1Q9P1Y6 1649 aaKnown RBP19.8■□□□□ 0.76
GINS3-203ENST00000426538 WDR63Q8IWG1 891 aa19.79■□□□□ 0.76
GINS3-203ENST00000426538 IGSF1Q8N6C5 1336 aa19.79■□□□□ 0.76
GINS3-203ENST00000426538 E9PSI1 815 aa19.79■□□□□ 0.76
GINS3-203ENST00000426538 NFE2L2Q16236 605 aa19.79■□□□□ 0.76
GINS3-203ENST00000426538 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
GINS3-203ENST00000426538 SLFN5Q08AF3 891 aa19.78■□□□□ 0.76
GINS3-203ENST00000426538 RGPD1P0DJD0 1748 aa19.78■□□□□ 0.76
GINS3-203ENST00000426538 PIP4K2BP78356 416 aa19.77■□□□□ 0.76
GINS3-203ENST00000426538 SUPT16HQ9Y5B9 1047 aaKnown RBP19.77■□□□□ 0.76
GINS3-203ENST00000426538 UBAP1LF5GYI3 381 aa19.76■□□□□ 0.75
GINS3-203ENST00000426538 ANKRD24Q8TF21 1146 aa19.76■□□□□ 0.75
GINS3-203ENST00000426538 AXIN2Q9Y2T1 843 aa19.76■□□□□ 0.75
GINS3-203ENST00000426538 KDRP35968 1356 aa19.76■□□□□ 0.75
GINS3-203ENST00000426538 TRIM35Q9UPQ4 493 aa19.75■□□□□ 0.75
GINS3-203ENST00000426538 AHDC1Q5TGY3 1603 aaPredicted RBP19.75■□□□□ 0.75
GINS3-203ENST00000426538 CPDO75976 1380 aa19.75■□□□□ 0.75
GINS3-203ENST00000426538 KIAA0232Q92628 1395 aa19.75■□□□□ 0.75
GINS3-203ENST00000426538 NBPF6Q5VWK0 638 aa19.74■□□□□ 0.75
GINS3-203ENST00000426538 DUSP27Q5VZP5 1158 aa19.74■□□□□ 0.75
GINS3-203ENST00000426538 NBPF4Q96M43 638 aa19.74■□□□□ 0.75
GINS3-203ENST00000426538 LMOD3Q0VAK6 560 aa19.73■□□□□ 0.75
GINS3-203ENST00000426538 CRYBG1Q9Y4K1 1723 aa19.73■□□□□ 0.75
GINS3-203ENST00000426538 NEFLP07196 543 aa19.73■□□□□ 0.75
GINS3-203ENST00000426538 CHRNA2Q15822 529 aa19.73■□□□□ 0.75
GINS3-203ENST00000426538 TRMT2AQ8IZ69 625 aaKnown RBP19.73■□□□□ 0.75
GINS3-203ENST00000426538 SPINK5Q9NQ38 1064 aaPredicted RBP19.73■□□□□ 0.75
GINS3-203ENST00000426538 PRDM11Q9NQV5 511 aa19.73■□□□□ 0.75
GINS3-203ENST00000426538 ERBB3P21860 1342 aa19.72■□□□□ 0.75
GINS3-203ENST00000426538 USHBP1Q8N6Y0 703 aa19.71■□□□□ 0.75
GINS3-203ENST00000426538 CALD1Q05682 793 aaKnown RBP19.71■□□□□ 0.75
GINS3-203ENST00000426538 CERKQ8TCT0 537 aa19.71■□□□□ 0.75
GINS3-203ENST00000426538 MYH16Q9H6N6 1097 aa19.71■□□□□ 0.75
GINS3-203ENST00000426538 CSB-PGBD3P0DP91 1061 aa19.7■□□□□ 0.74
GINS3-203ENST00000426538 RCAN3Q9UKA8 241 aa19.7■□□□□ 0.74
GINS3-203ENST00000426538 GAS2L2Q8NHY3 880 aa19.69■□□□□ 0.74
GINS3-203ENST00000426538 ABCC6O95255 1503 aa19.69■□□□□ 0.74
GINS3-203ENST00000426538 IL16Q14005 1332 aa19.69■□□□□ 0.74
GINS3-203ENST00000426538 MTHFSDQ2M296 383 aaKnown RBP19.68■□□□□ 0.74
GINS3-203ENST00000426538 RGPD5Q99666 1765 aa19.68■□□□□ 0.74
GINS3-203ENST00000426538 NLRP2Q9NX02 1062 aa19.68■□□□□ 0.74
GINS3-203ENST00000426538 PHLPP1O60346 1717 aa19.67■□□□□ 0.74
GINS3-203ENST00000426538 COL18A1P39060 1754 aa19.67■□□□□ 0.74
GINS3-203ENST00000426538 RTF1Q92541 710 aaKnown RBP19.66■□□□□ 0.74
GINS3-203ENST00000426538 RGPD2P0DJD1 1756 aa19.64■□□□□ 0.74
GINS3-203ENST00000426538 ABCA3Q99758 1704 aa19.64■□□□□ 0.73
GINS3-203ENST00000426538 DLG5Q8TDM6 1919 aa19.64■□□□□ 0.73
GINS3-203ENST00000426538 FAM83GA6ND36 823 aa19.63■□□□□ 0.73
GINS3-203ENST00000426538 FKBP8Q14318 412 aa19.63■□□□□ 0.73
GINS3-203ENST00000426538 LAS1LQ9Y4W2 734 aaKnown RBP19.63■□□□□ 0.73
GINS3-203ENST00000426538 EVA1CP58658 441 aa19.62■□□□□ 0.73
GINS3-203ENST00000426538 AMOTQ4VCS5 1084 aa19.62■□□□□ 0.73
GINS3-203ENST00000426538 PLEKHO1Q53GL0 409 aaPredicted RBP19.62■□□□□ 0.73
GINS3-203ENST00000426538 THUMPD2Q9BTF0 503 aaKnown RBP19.62■□□□□ 0.73
GINS3-203ENST00000426538 COL16A1Q07092 1604 aaPredicted RBP19.62■□□□□ 0.73
GINS3-203ENST00000426538 GNAT3A8MTJ3 354 aa19.62■□□□□ 0.73
GINS3-203ENST00000426538 HTATSF1O43719 755 aaKnown RBP19.62■□□□□ 0.73
GINS3-203ENST00000426538 GNAI1P63096 354 aa19.62■□□□□ 0.73
GINS3-203ENST00000426538 DCTN1Q14203 1278 aa19.62■□□□□ 0.73
GINS3-203ENST00000426538 RAPGEF4Q8WZA2 1011 aa19.62■□□□□ 0.73
GINS3-203ENST00000426538 NCAPD2Q15021 1401 aa19.62■□□□□ 0.73
GINS3-203ENST00000426538 COL22A1Q8NFW1 1626 aaPredicted RBP19.61■□□□□ 0.73
GINS3-203ENST00000426538 TOM1L2Q6ZVM7 507 aa19.6■□□□□ 0.73
GINS3-203ENST00000426538 MCM10Q7L590 875 aa19.6■□□□□ 0.73
GINS3-203ENST00000426538 WDR17Q8IZU2 1322 aa19.6■□□□□ 0.73
GINS3-203ENST00000426538 TSR2Q969E8 191 aaKnown RBP19.6■□□□□ 0.73
GINS3-203ENST00000426538 FANCIQ9NVI1 1328 aa19.6■□□□□ 0.73
GINS3-203ENST00000426538 IFT57Q9NWB7 429 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms