RNA–Protein interactions for RNA: ENST00000426501.5

HERC2P3-204, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene HERC2P3, Length 5,995 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-204ENST00000426501 CUX1P39880 1505 aa13.97□□□□□ -0.17
HERC2P3-204ENST00000426501 IQCEQ6IPM2 695 aa13.97□□□□□ -0.17
HERC2P3-204ENST00000426501 NUP133Q8WUM0 1156 aa13.96□□□□□ -0.17
HERC2P3-204ENST00000426501 CCDC192P0DO97 292 aa13.96□□□□□ -0.17
HERC2P3-204ENST00000426501 MATR3P43243 847 aaKnown RBP eCLIP13.96□□□□□ -0.179e-8■■■■□ 23.1
HERC2P3-204ENST00000426501 ZSCAN29Q8IWY8 852 aaPredicted RBP13.96□□□□□ -0.17
HERC2P3-204ENST00000426501 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.17
HERC2P3-204ENST00000426501 FANCD2Q9BXW9 1451 aa13.96□□□□□ -0.17
HERC2P3-204ENST00000426501 ZNF76P36508 570 aa13.96□□□□□ -0.17
HERC2P3-204ENST00000426501 HMGN5P82970 282 aaKnown RBP13.96□□□□□ -0.17
HERC2P3-204ENST00000426501 CEBPZQ03701 1054 aaKnown RBP13.96□□□□□ -0.17
HERC2P3-204ENST00000426501 TCP11L2Q8N4U5 519 aa13.96□□□□□ -0.17
HERC2P3-204ENST00000426501 CTNNA3Q9UI47 895 aa13.96□□□□□ -0.17
HERC2P3-204ENST00000426501 FIBPO43427 364 aa13.96□□□□□ -0.18
HERC2P3-204ENST00000426501 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.18
HERC2P3-204ENST00000426501 LRRCC1Q9C099 1032 aa13.96□□□□□ -0.18
HERC2P3-204ENST00000426501 CCDC7Q96M83 1385 aa13.96□□□□□ -0.18
HERC2P3-204ENST00000426501 GBP2P32456 591 aaPredicted RBP13.96□□□□□ -0.18
HERC2P3-204ENST00000426501 TMOD2Q9NZR1 351 aa13.96□□□□□ -0.18
HERC2P3-204ENST00000426501 SRCIN1Q9C0H9 1055 aa13.95□□□□□ -0.18
HERC2P3-204ENST00000426501 TMEM132EQ6IEE7 984 aa13.95□□□□□ -0.18
HERC2P3-204ENST00000426501 PRPF40AO75400 957 aaKnown RBP13.95□□□□□ -0.18
HERC2P3-204ENST00000426501 ERLIN1O75477 346 aa13.95□□□□□ -0.18
HERC2P3-204ENST00000426501 ME1P48163 572 aa13.95□□□□□ -0.18
HERC2P3-204ENST00000426501 UBAC1Q9BSL1 405 aa13.95□□□□□ -0.18
HERC2P3-204ENST00000426501 BCL11BQ9C0K0 894 aaPredicted RBP13.95□□□□□ -0.18
HERC2P3-204ENST00000426501 POTEJP0CG39 1038 aa13.95□□□□□ -0.18
HERC2P3-204ENST00000426501 THEMISQ8N1K5 641 aaPredicted RBP13.95□□□□□ -0.18
HERC2P3-204ENST00000426501 WASF1Q92558 559 aa13.95□□□□□ -0.18
HERC2P3-204ENST00000426501 KIAA0754O94854 1291 aa13.94□□□□□ -0.18
HERC2P3-204ENST00000426501 TNMDQ9H2S6 317 aa13.94□□□□□ -0.18
HERC2P3-204ENST00000426501 SEPT11Q9NVA2 429 aaKnown RBP13.94□□□□□ -0.18
HERC2P3-204ENST00000426501 WDHD1O75717 1129 aaPredicted RBP13.94□□□□□ -0.18
HERC2P3-204ENST00000426501 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
HERC2P3-204ENST00000426501 TRAK2O60296 914 aa13.94□□□□□ -0.18
HERC2P3-204ENST00000426501 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
HERC2P3-204ENST00000426501 WDR33Q9C0J8 1336 aaKnown RBP13.94□□□□□ -0.18
HERC2P3-204ENST00000426501 NUTM2BA6NNL0 878 aaPredicted RBP13.93□□□□□ -0.18
HERC2P3-204ENST00000426501 NUTM2EB1AL46 878 aaPredicted RBP13.93□□□□□ -0.18
HERC2P3-204ENST00000426501 TDO2P48775 406 aa13.93□□□□□ -0.18
HERC2P3-204ENST00000426501 KRT85P78386 507 aa13.93□□□□□ -0.18
HERC2P3-204ENST00000426501 EXOSC9Q06265 439 aaKnown RBP13.93□□□□□ -0.18
HERC2P3-204ENST00000426501 ZNF530Q6P9A1 599 aaPredicted RBP13.93□□□□□ -0.18
HERC2P3-204ENST00000426501 NUTM2AQ8IVF1 878 aaPredicted RBP13.93□□□□□ -0.18
HERC2P3-204ENST00000426501 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
HERC2P3-204ENST00000426501 CCDC97Q96F63 343 aaPredicted RBP13.93□□□□□ -0.18
HERC2P3-204ENST00000426501 SSBP05455 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
HERC2P3-204ENST00000426501 TNIP1Q15025 636 aa13.93□□□□□ -0.18
HERC2P3-204ENST00000426501 EIF3JO75822 258 aaKnown RBP13.92□□□□□ -0.18
HERC2P3-204ENST00000426501 ZNF287Q9HBT7 754 aa13.92□□□□□ -0.18
HERC2P3-204ENST00000426501 STK3Q13188 491 aa13.92□□□□□ -0.18
HERC2P3-204ENST00000426501 NFKBIBQ15653 356 aa13.92□□□□□ -0.18
HERC2P3-204ENST00000426501 STK11IPQ8N1F8 1099 aa13.92□□□□□ -0.18
HERC2P3-204ENST00000426501 SIL1Q9H173 461 aa13.92□□□□□ -0.18
HERC2P3-204ENST00000426501 CETN2P41208 172 aa13.92□□□□□ -0.18
HERC2P3-204ENST00000426501 RAI14Q9P0K7 980 aa13.92□□□□□ -0.18
HERC2P3-204ENST00000426501 ANKRD50Q9ULJ7 1429 aa13.92□□□□□ -0.18
HERC2P3-204ENST00000426501 IGHMBP2P38935 993 aaKnown RBP13.92□□□□□ -0.18
HERC2P3-204ENST00000426501 ADAMTS8Q9UP79 889 aa13.92□□□□□ -0.18
HERC2P3-204ENST00000426501 PPP1R12BO60237 982 aaPredicted RBP13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 PLCD4Q9BRC7 762 aa13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 KRT32Q14532 448 aa13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 CEP57L1Q8IYX8 460 aa13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 CCDC112Q8NEF3 446 aa13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 PDIA4P13667 645 aaKnown RBP13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 ZSCAN31Q96LW9 406 aaPredicted RBP13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 CEP126Q9P2H0 1117 aa13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 FKBP4Q02790 459 aaKnown RBP eCLIP13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 TAX1BP1Q86VP1 789 aa13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 CEP131Q9UPN4 1083 aa13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 PDZRN3Q9UPQ7 1066 aa13.91□□□□□ -0.18
HERC2P3-204ENST00000426501 CFAP45Q9UL16 551 aa13.9□□□□□ -0.18
HERC2P3-204ENST00000426501 TAF4BQ92750 862 aa13.9□□□□□ -0.18
HERC2P3-204ENST00000426501 PDE3AQ14432 1141 aa13.9□□□□□ -0.18
HERC2P3-204ENST00000426501 NOB1Q9ULX3 412 aaKnown RBP13.9□□□□□ -0.18
HERC2P3-204ENST00000426501 LARP1BQ659C4 914 aaKnown RBP13.9□□□□□ -0.18
HERC2P3-204ENST00000426501 PPP4R3AQ6IN85 833 aa13.9□□□□□ -0.18
HERC2P3-204ENST00000426501 PRAM1Q96QH2 718 aa13.9□□□□□ -0.18
HERC2P3-204ENST00000426501 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.18
HERC2P3-204ENST00000426501 BLOC1S2Q6QNY1 142 aa13.9□□□□□ -0.18
HERC2P3-204ENST00000426501 MYL6BP14649 208 aa13.89□□□□□ -0.19
HERC2P3-204ENST00000426501 SULT6B1Q6IMI4 303 aa13.89□□□□□ -0.19
HERC2P3-204ENST00000426501 SPC24Q8NBT2 197 aa13.89□□□□□ -0.19
HERC2P3-204ENST00000426501 LRP2BPQ9P2M1 347 aa13.89□□□□□ -0.19
HERC2P3-204ENST00000426501 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
HERC2P3-204ENST00000426501 AACSQ86V21 672 aa13.89□□□□□ -0.19
HERC2P3-204ENST00000426501 C1orf115Q9H7X2 142 aa13.89□□□□□ -0.19
HERC2P3-204ENST00000426501 PPP2R1AP30153 589 aa13.88□□□□□ -0.19
HERC2P3-204ENST00000426501 SMTNL1A8MU46 457 aa13.88□□□□□ -0.19
HERC2P3-204ENST00000426501 ZNF397Q8NF99 534 aaPredicted RBP13.88□□□□□ -0.19
HERC2P3-204ENST00000426501 PRDM11Q9NQV5 511 aa13.88□□□□□ -0.19
HERC2P3-204ENST00000426501 FGD6Q6ZV73 1430 aa13.87□□□□□ -0.19
HERC2P3-204ENST00000426501 INCENPQ9NQS7 918 aa13.87□□□□□ -0.19
HERC2P3-204ENST00000426501 PDRG1Q9NUG6 133 aa13.87□□□□□ -0.19
HERC2P3-204ENST00000426501 PPP6R1Q9UPN7 881 aa13.87□□□□□ -0.19
HERC2P3-204ENST00000426501 SSR1P43307 286 aaKnown RBP13.87□□□□□ -0.19
HERC2P3-204ENST00000426501 SPATA32Q96LK8 384 aa13.87□□□□□ -0.19
HERC2P3-204ENST00000426501 CENPHQ9H3R5 247 aa13.87□□□□□ -0.19
HERC2P3-204ENST00000426501 USP5P45974 858 aa13.87□□□□□ -0.19
HERC2P3-204ENST00000426501 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms