RNA–Protein interactions for RNA: ENST00000426467.1

LINC02554-201, Transcript of long intergenic non-protein coding RNA 2554, humanhuman

TSL 1 (best) BASIC

Gene LINC02554, Length 5,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02554-201ENST00000426467 FOXO3O43524 673 aa12.94□□□□□ -0.34
LINC02554-201ENST00000426467 FOXD4L5Q5VV16 416 aaPredicted RBP12.94□□□□□ -0.34
LINC02554-201ENST00000426467 FOXD4L4Q8WXT5 416 aaPredicted RBP12.94□□□□□ -0.34
LINC02554-201ENST00000426467 SRCIN1Q9C0H9 1055 aa12.94□□□□□ -0.34
LINC02554-201ENST00000426467 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
LINC02554-201ENST00000426467 DDX49Q9Y6V7 483 aaKnown RBP12.94□□□□□ -0.34
LINC02554-201ENST00000426467 IGHDP01880 384 aa12.94□□□□□ -0.34
LINC02554-201ENST00000426467 HSP90AB2PQ58FF8 381 aa12.94□□□□□ -0.34
LINC02554-201ENST00000426467 LRRIQ1Q96JM4 1722 aa12.94□□□□□ -0.34
LINC02554-201ENST00000426467 TRPM2O94759 1503 aa12.93□□□□□ -0.34
LINC02554-201ENST00000426467 RNF123Q5XPI4 1314 aa12.93□□□□□ -0.34
LINC02554-201ENST00000426467 ZKSCAN1P17029 563 aaPredicted RBP12.93□□□□□ -0.34
LINC02554-201ENST00000426467 ZRANB1Q9UGI0 708 aa12.93□□□□□ -0.34
LINC02554-201ENST00000426467 FAM83GA6ND36 823 aa12.93□□□□□ -0.34
LINC02554-201ENST00000426467 DNTTIP2Q5QJE6 756 aaKnown RBP12.93□□□□□ -0.34
LINC02554-201ENST00000426467 ZC3H6P61129 1189 aaKnown RBP12.93□□□□□ -0.34
LINC02554-201ENST00000426467 MBIPQ9NS73 344 aa12.93□□□□□ -0.34
LINC02554-201ENST00000426467 MLH3Q9UHC1 1453 aa12.92□□□□□ -0.34
LINC02554-201ENST00000426467 SKOR2Q2VWA4 1001 aaPredicted RBP12.92□□□□□ -0.34
LINC02554-201ENST00000426467 YEATS2Q9ULM3 1422 aa12.91□□□□□ -0.34
LINC02554-201ENST00000426467 HSP90B1P14625 803 aaKnown RBP12.91□□□□□ -0.34
LINC02554-201ENST00000426467 TTC21AQ8NDW8 1320 aa12.91□□□□□ -0.34
LINC02554-201ENST00000426467 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
LINC02554-201ENST00000426467 MAGI2Q86UL8 1455 aa12.91□□□□□ -0.34
LINC02554-201ENST00000426467 PCDHB15Q9Y5E8 787 aa12.91□□□□□ -0.34
LINC02554-201ENST00000426467 LRRCC1Q9C099 1032 aa12.91□□□□□ -0.34
LINC02554-201ENST00000426467 PLXNC1O60486 1568 aa12.9□□□□□ -0.34
LINC02554-201ENST00000426467 HTATSF1O43719 755 aaKnown RBP12.9□□□□□ -0.34
LINC02554-201ENST00000426467 BTBD11A6QL63 1104 aa12.9□□□□□ -0.34
LINC02554-201ENST00000426467 NUCB2P80303 420 aa12.9□□□□□ -0.34
LINC02554-201ENST00000426467 BLMP54132 1417 aaPredicted RBP12.9□□□□□ -0.34
LINC02554-201ENST00000426467 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
LINC02554-201ENST00000426467 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
LINC02554-201ENST00000426467 MSNP26038 577 aaKnown RBP12.89□□□□□ -0.35
LINC02554-201ENST00000426467 NAP1L5Q96NT1 182 aaPredicted RBP12.89□□□□□ -0.35
LINC02554-201ENST00000426467 SPG7Q9UQ90 795 aa12.89□□□□□ -0.35
LINC02554-201ENST00000426467 NCKAP5LQ9HCH0 1330 aa12.89□□□□□ -0.35
LINC02554-201ENST00000426467 FRAT2O75474 233 aaPredicted RBP12.89□□□□□ -0.35
LINC02554-201ENST00000426467 CSPP1Q1MSJ5 1256 aa12.89□□□□□ -0.35
LINC02554-201ENST00000426467 ZFYVE16Q7Z3T8 1539 aa12.89□□□□□ -0.35
LINC02554-201ENST00000426467 UGGT1Q9NYU2 1555 aa12.89□□□□□ -0.35
LINC02554-201ENST00000426467 ZFYVE9O95405 1425 aa12.89□□□□□ -0.35
LINC02554-201ENST00000426467 GTF2E1P29083 439 aaPredicted RBP12.89□□□□□ -0.35
LINC02554-201ENST00000426467 RABEP1Q15276 862 aa12.89□□□□□ -0.35
LINC02554-201ENST00000426467 CFAP74Q9C0B2 1584 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 ARHGAP45Q92619 1136 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 ARAP3Q8WWN8 1544 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 EIF4A2Q14240 407 aaKnown RBP12.88□□□□□ -0.35
LINC02554-201ENST00000426467 CNTROBQ8N137 903 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 PRDM11Q9NQV5 511 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 ATP6V1DQ9Y5K8 247 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 ZMYM4Q5VZL5 1548 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 LRRFIP1Q32MZ4 808 aaKnown RBP12.88□□□□□ -0.35
LINC02554-201ENST00000426467 AEBP1Q8IUX7 1158 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 GNL2Q13823 731 aaKnown RBP12.88□□□□□ -0.35
LINC02554-201ENST00000426467 FOXD4L6Q3SYB3 417 aaPredicted RBP12.88□□□□□ -0.35
LINC02554-201ENST00000426467 RNF20Q5VTR2 975 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 FOXD4L3Q6VB84 417 aaPredicted RBP12.88□□□□□ -0.35
LINC02554-201ENST00000426467 PHACTR3Q96KR7 559 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 KIF3AQ9Y496 699 aa12.88□□□□□ -0.35
LINC02554-201ENST00000426467 MYOM2P54296 1465 aa12.87□□□□□ -0.35
LINC02554-201ENST00000426467 RLBP1P12271 317 aa12.87□□□□□ -0.35
LINC02554-201ENST00000426467 SRGAP3O43295 1099 aa12.87□□□□□ -0.35
LINC02554-201ENST00000426467 F6X3S4 739 aa12.87□□□□□ -0.35
LINC02554-201ENST00000426467 AMOTQ4VCS5 1084 aa12.87□□□□□ -0.35
LINC02554-201ENST00000426467 EXOC6BQ9Y2D4 811 aa12.87□□□□□ -0.35
LINC02554-201ENST00000426467 IQGAP3Q86VI3 1631 aa12.87□□□□□ -0.35
LINC02554-201ENST00000426467 PTPRCP08575 1304 aa12.87□□□□□ -0.35
LINC02554-201ENST00000426467 NEK4P51957 841 aa12.87□□□□□ -0.35
LINC02554-201ENST00000426467 TOM1L2Q6ZVM7 507 aa12.87□□□□□ -0.35
LINC02554-201ENST00000426467 DMRT2Q9Y5R5 561 aa12.87□□□□□ -0.35
LINC02554-201ENST00000426467 TNNQ9UQP3 1299 aa12.86□□□□□ -0.35
LINC02554-201ENST00000426467 ERVK-7P63135 1459 aa12.86□□□□□ -0.35
LINC02554-201ENST00000426467 HDAC1Q13547 482 aaPredicted RBP12.86□□□□□ -0.35
LINC02554-201ENST00000426467 ERC1Q8IUD2 1116 aa12.86□□□□□ -0.35
LINC02554-201ENST00000426467 STRN4Q9NRL3 753 aa12.86□□□□□ -0.35
LINC02554-201ENST00000426467 CABP4P57796 275 aa12.86□□□□□ -0.35
LINC02554-201ENST00000426467 CDC42BPBQ9Y5S2 1711 aa12.85□□□□□ -0.35
LINC02554-201ENST00000426467 RSPH6AQ9H0K4 717 aa12.85□□□□□ -0.35
LINC02554-201ENST00000426467 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
LINC02554-201ENST00000426467 NEUROD6Q96NK8 337 aa12.85□□□□□ -0.35
LINC02554-201ENST00000426467 C8orf58Q8NAV2 365 aa12.85□□□□□ -0.35
LINC02554-201ENST00000426467 CROCC2H7BZ55 1655 aa12.85□□□□□ -0.35
LINC02554-201ENST00000426467 KDM5AP29375 1690 aaKnown RBP12.84□□□□□ -0.35
LINC02554-201ENST00000426467 PHF14O94880 888 aa12.84□□□□□ -0.35
LINC02554-201ENST00000426467 GLIPR1L2Q4G1C9 344 aa12.84□□□□□ -0.35
LINC02554-201ENST00000426467 IL1RAPL2Q9NP60 686 aa12.84□□□□□ -0.35
LINC02554-201ENST00000426467 FLIIQ13045 1269 aa12.84□□□□□ -0.35
LINC02554-201ENST00000426467 VAMP4O75379 141 aa12.84□□□□□ -0.35
LINC02554-201ENST00000426467 MYL6BP14649 208 aa12.84□□□□□ -0.35
LINC02554-201ENST00000426467 MPRIPQ6WCQ1 1025 aa12.84□□□□□ -0.35
LINC02554-201ENST00000426467 EDC4Q6P2E9 1401 aaKnown RBP12.83□□□□□ -0.36
LINC02554-201ENST00000426467 KCNA6P17658 529 aa12.83□□□□□ -0.36
LINC02554-201ENST00000426467 MCM2P49736 904 aa12.83□□□□□ -0.36
LINC02554-201ENST00000426467 UNC13BO14795 1591 aa12.83□□□□□ -0.36
LINC02554-201ENST00000426467 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.36
LINC02554-201ENST00000426467 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
LINC02554-201ENST00000426467 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
LINC02554-201ENST00000426467 FSD1Q9BTV5 496 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms