RNA–Protein interactions for RNA: ENST00000426385.3

PMP22-204, Transcript of peripheral myelin protein 22, humanhuman

TSL 2 BASIC

Gene PMP22, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-204ENST00000426385 WNK3Q9BYP7 1800 aa13.31□□□□□ -0.28
PMP22-204ENST00000426385 BRD4O60885 1362 aaPredicted RBP13.31□□□□□ -0.28
PMP22-204ENST00000426385 CPDO75976 1380 aa13.31□□□□□ -0.28
PMP22-204ENST00000426385 GCP02774 474 aa13.3□□□□□ -0.28
PMP22-204ENST00000426385 NME9Q86XW9 330 aa13.3□□□□□ -0.28
PMP22-204ENST00000426385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.3□□□□□ -0.28
PMP22-204ENST00000426385 SPON1Q9HCB6 807 aa13.3□□□□□ -0.28
PMP22-204ENST00000426385 KCNQ2O43526 872 aa13.29□□□□□ -0.28
PMP22-204ENST00000426385 NLRP13Q86W25 1043 aa13.29□□□□□ -0.28
PMP22-204ENST00000426385 OVOS2A0A0J9YW53 1432 aa13.28□□□□□ -0.28
PMP22-204ENST00000426385 DISP2A7MBM2 1401 aa13.28□□□□□ -0.28
PMP22-204ENST00000426385 OVOS2Q6IE36 1432 aa13.28□□□□□ -0.28
PMP22-204ENST00000426385 EDC4Q6P2E9 1401 aaKnown RBP13.28□□□□□ -0.28
PMP22-204ENST00000426385 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.28
PMP22-204ENST00000426385 LARP1Q6PKG0 1096 aaKnown RBP13.27□□□□□ -0.29
PMP22-204ENST00000426385 TTC21AQ8NDW8 1320 aa13.27□□□□□ -0.29
PMP22-204ENST00000426385 KIF20BQ96Q89 1820 aa13.27□□□□□ -0.29
PMP22-204ENST00000426385 LRRC37A3O60309 1634 aa13.26□□□□□ -0.29
PMP22-204ENST00000426385 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
PMP22-204ENST00000426385 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
PMP22-204ENST00000426385 USP31Q70CQ4 1352 aa13.25□□□□□ -0.29
PMP22-204ENST00000426385 PDGFDQ9GZP0 370 aaPredicted RBP13.25□□□□□ -0.29
PMP22-204ENST00000426385 AXIN2Q9Y2T1 843 aa13.25□□□□□ -0.29
PMP22-204ENST00000426385 PARP4Q9UKK3 1724 aaKnown RBP13.25□□□□□ -0.29
PMP22-204ENST00000426385 AATKQ6ZMQ8 1374 aa13.24□□□□□ -0.29
PMP22-204ENST00000426385 HDGFL2Q7Z4V5 671 aaPredicted RBP13.24□□□□□ -0.29
PMP22-204ENST00000426385 ANKRD36BQ8N2N9 1353 aa13.23□□□□□ -0.29
PMP22-204ENST00000426385 ZBTB7AO95365 584 aa13.23□□□□□ -0.29
PMP22-204ENST00000426385 TMF1P82094 1093 aa13.23□□□□□ -0.29
PMP22-204ENST00000426385 TCP11L2Q8N4U5 519 aa13.23□□□□□ -0.29
PMP22-204ENST00000426385 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
PMP22-204ENST00000426385 PARD3Q8TEW0 1356 aa13.22□□□□□ -0.29
PMP22-204ENST00000426385 NINLQ9Y2I6 1382 aa13.22□□□□□ -0.29
PMP22-204ENST00000426385 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
PMP22-204ENST00000426385 PTF1AQ7RTS3 328 aa13.22□□□□□ -0.29
PMP22-204ENST00000426385 ARHGEF25Q86VW2 580 aa13.22□□□□□ -0.29
PMP22-204ENST00000426385 PUS7Q96PZ0 661 aaKnown RBP13.22□□□□□ -0.29
PMP22-204ENST00000426385 CRB1P82279 1406 aa13.22□□□□□ -0.29
PMP22-204ENST00000426385 HSPA5P11021 654 aaKnown RBP13.21□□□□□ -0.29
PMP22-204ENST00000426385 FBLN1P23142 703 aa13.21□□□□□ -0.29
PMP22-204ENST00000426385 ZNF784Q8NCA9 323 aaPredicted RBP13.21□□□□□ -0.29
PMP22-204ENST00000426385 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
PMP22-204ENST00000426385 ABCC6O95255 1503 aa13.21□□□□□ -0.29
PMP22-204ENST00000426385 PEAK1Q9H792 1746 aa13.2□□□□□ -0.3
PMP22-204ENST00000426385 SENP3-EIF4A1A0A087X0R7 540 aa13.2□□□□□ -0.3
PMP22-204ENST00000426385 BCL11BQ9C0K0 894 aaPredicted RBP13.2□□□□□ -0.3
PMP22-204ENST00000426385 RGPD2P0DJD1 1756 aa13.2□□□□□ -0.3
PMP22-204ENST00000426385 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
PMP22-204ENST00000426385 NSD3Q9BZ95 1437 aa13.19□□□□□ -0.3
PMP22-204ENST00000426385 NUP188Q5SRE5 1749 aa13.19□□□□□ -0.3
PMP22-204ENST00000426385 KCNH5Q8NCM2 988 aa13.18□□□□□ -0.3
PMP22-204ENST00000426385 CARD14Q9BXL6 1004 aa13.18□□□□□ -0.3
PMP22-204ENST00000426385 WDR17Q8IZU2 1322 aa13.17□□□□□ -0.3
PMP22-204ENST00000426385 POLR3GLQ9BT43 218 aa13.17□□□□□ -0.3
PMP22-204ENST00000426385 GGNBP2Q9H3C7 697 aa13.17□□□□□ -0.3
PMP22-204ENST00000426385 UTRNP46939 3433 aa13.17□□□□□ -0.3
PMP22-204ENST00000426385 RREB1Q92766 1687 aa13.16□□□□□ -0.3
PMP22-204ENST00000426385 FAM208AQ9UK61 1670 aaKnown RBP13.16□□□□□ -0.3
PMP22-204ENST00000426385 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
PMP22-204ENST00000426385 TOM1L2Q6ZVM7 507 aa13.16□□□□□ -0.3
PMP22-204ENST00000426385 PROM2Q8N271 834 aa13.16□□□□□ -0.3
PMP22-204ENST00000426385 ANKRD26Q9UPS8 1709 aa13.16□□□□□ -0.3
PMP22-204ENST00000426385 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.3
PMP22-204ENST00000426385 ERBB3P21860 1342 aa13.14□□□□□ -0.31
PMP22-204ENST00000426385 MAP3K19Q56UN5 1328 aa13.14□□□□□ -0.31
PMP22-204ENST00000426385 SBF2Q86WG5 1849 aa13.14□□□□□ -0.31
PMP22-204ENST00000426385 FYB1O15117 783 aa13.14□□□□□ -0.31
PMP22-204ENST00000426385 PTGER2P43116 358 aa13.14□□□□□ -0.31
PMP22-204ENST00000426385 DDB1Q16531 1140 aa13.14□□□□□ -0.31
PMP22-204ENST00000426385 SYT17Q9BSW7 474 aa13.14□□□□□ -0.31
PMP22-204ENST00000426385 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
PMP22-204ENST00000426385 THRAP3Q9Y2W1 955 aaKnown RBP13.14□□□□□ -0.31
PMP22-204ENST00000426385 PLSCR1O15162 318 aa13.13□□□□□ -0.31
PMP22-204ENST00000426385 CSB-PGBD3P0DP91 1061 aa13.13□□□□□ -0.31
PMP22-204ENST00000426385 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
PMP22-204ENST00000426385 C1QTNF8P60827 252 aa13.12□□□□□ -0.31
PMP22-204ENST00000426385 RRS1Q15050 365 aaKnown RBP13.12□□□□□ -0.31
PMP22-204ENST00000426385 MARCH10Q8NA82 808 aaPredicted RBP13.12□□□□□ -0.31
PMP22-204ENST00000426385 ANKRD24Q8TF21 1146 aa13.12□□□□□ -0.31
PMP22-204ENST00000426385 COG3Q96JB2 828 aa13.12□□□□□ -0.31
PMP22-204ENST00000426385 SLC24A1O60721 1099 aa13.11□□□□□ -0.31
PMP22-204ENST00000426385 CDCA8Q53HL2 280 aa13.11□□□□□ -0.31
PMP22-204ENST00000426385 LTV1Q96GA3 475 aaPredicted RBP13.11□□□□□ -0.31
PMP22-204ENST00000426385 STK32BQ9NY57 414 aa13.11□□□□□ -0.31
PMP22-204ENST00000426385 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
PMP22-204ENST00000426385 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
PMP22-204ENST00000426385 TNS2Q63HR2 1409 aa13.1□□□□□ -0.31
PMP22-204ENST00000426385 OVOS2A0A0G2JMS6 1433 aa13.09□□□□□ -0.31
PMP22-204ENST00000426385 HOXC9P31274 260 aa13.09□□□□□ -0.31
PMP22-204ENST00000426385 CCDC7Q96M83 1385 aa13.08□□□□□ -0.31
PMP22-204ENST00000426385 SLC15A2Q16348 729 aa13.08□□□□□ -0.32
PMP22-204ENST00000426385 PELP1Q8IZL8 1130 aaKnown RBP13.08□□□□□ -0.32
PMP22-204ENST00000426385 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
PMP22-204ENST00000426385 IP6K1Q92551 441 aa13.08□□□□□ -0.32
PMP22-204ENST00000426385 NLRP2Q9NX02 1062 aa13.08□□□□□ -0.32
PMP22-204ENST00000426385 KIF7Q2M1P5 1343 aa13.08□□□□□ -0.32
PMP22-204ENST00000426385 MEGF6O75095 1541 aa13.08□□□□□ -0.32
PMP22-204ENST00000426385 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
PMP22-204ENST00000426385 GPR162Q16538 588 aa13.07□□□□□ -0.32
PMP22-204ENST00000426385 EMILIN1Q9Y6C2 1016 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms