RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 BLMP54132 1417 aaPredicted RBP25.67■■□□□ 1.7
SMARCAL1-205ENST00000425815 THRAP3Q9Y2W1 955 aaKnown RBP25.67■■□□□ 1.7
SMARCAL1-205ENST00000425815 ANKRD36BQ8N2N9 1353 aa25.66■■□□□ 1.7
SMARCAL1-205ENST00000425815 CRB1P82279 1406 aa25.65■■□□□ 1.7
SMARCAL1-205ENST00000425815 CDCA8Q53HL2 280 aa25.64■■□□□ 1.7
SMARCAL1-205ENST00000425815 WDR17Q8IZU2 1322 aa25.63■■□□□ 1.69
SMARCAL1-205ENST00000425815 OVOS2A0A0J9YW53 1432 aa25.63■■□□□ 1.69
SMARCAL1-205ENST00000425815 OVOS2Q6IE36 1432 aa25.63■■□□□ 1.69
SMARCAL1-205ENST00000425815 DEFB132Q7Z7B7 95 aa25.63■■□□□ 1.69
SMARCAL1-205ENST00000425815 TOM1L2Q6ZVM7 507 aa25.62■■□□□ 1.69
SMARCAL1-205ENST00000425815 USP54Q70EL1 1684 aa25.61■■□□□ 1.69
SMARCAL1-205ENST00000425815 FYB1O15117 783 aa25.59■■□□□ 1.69
SMARCAL1-205ENST00000425815 HSPA5P11021 654 aaKnown RBP25.59■■□□□ 1.69
SMARCAL1-205ENST00000425815 FBLN1P23142 703 aa25.59■■□□□ 1.69
SMARCAL1-205ENST00000425815 CARD14Q9BXL6 1004 aa25.59■■□□□ 1.69
SMARCAL1-205ENST00000425815 CARD10Q9BWT7 1032 aa25.58■■□□□ 1.69
SMARCAL1-205ENST00000425815 EIF4G2P78344 907 aaKnown RBP eCLIP25.57■■□□□ 1.68
SMARCAL1-205ENST00000425815 PDE3BQ13370 1112 aa25.57■■□□□ 1.68
SMARCAL1-205ENST00000425815 CSB-PGBD3P0DP91 1061 aa25.56■■□□□ 1.68
SMARCAL1-205ENST00000425815 SF3B2Q13435 895 aaKnown RBP25.56■■□□□ 1.68
SMARCAL1-205ENST00000425815 FAM196AQ6ZSG2 479 aa25.56■■□□□ 1.68
SMARCAL1-205ENST00000425815 COG3Q96JB2 828 aa25.56■■□□□ 1.68
SMARCAL1-205ENST00000425815 GGNBP2Q9H3C7 697 aa25.54■■□□□ 1.68
SMARCAL1-205ENST00000425815 IP6K1Q92551 441 aa25.53■■□□□ 1.68
SMARCAL1-205ENST00000425815 ERBB3P21860 1342 aa25.53■■□□□ 1.68
SMARCAL1-205ENST00000425815 ABCC6O95255 1503 aa25.53■■□□□ 1.68
SMARCAL1-205ENST00000425815 TRIM37O94972 964 aa25.51■■□□□ 1.67
SMARCAL1-205ENST00000425815 ANKRD24Q8TF21 1146 aa25.51■■□□□ 1.67
SMARCAL1-205ENST00000425815 MAP3K19Q56UN5 1328 aa25.51■■□□□ 1.67
SMARCAL1-205ENST00000425815 RGPD5Q99666 1765 aa25.49■■□□□ 1.67
SMARCAL1-205ENST00000425815 DISP2A7MBM2 1401 aa25.49■■□□□ 1.67
SMARCAL1-205ENST00000425815 C11orf95C9JLR9 678 aaPredicted RBP25.49■■□□□ 1.67
SMARCAL1-205ENST00000425815 EN1Q05925 392 aaPredicted RBP25.49■■□□□ 1.67
SMARCAL1-205ENST00000425815 DDB1Q16531 1140 aa25.49■■□□□ 1.67
SMARCAL1-205ENST00000425815 BAG6P46379 1132 aa25.48■■□□□ 1.67
SMARCAL1-205ENST00000425815 CDCA7Q9BWT1 371 aaPredicted RBP25.48■■□□□ 1.67
SMARCAL1-205ENST00000425815 NLRP2Q9NX02 1062 aa25.47■■□□□ 1.67
SMARCAL1-205ENST00000425815 CCDC7Q96M83 1385 aa25.46■■□□□ 1.67
SMARCAL1-205ENST00000425815 HOXC9P31274 260 aa25.46■■□□□ 1.67
SMARCAL1-205ENST00000425815 RRS1Q15050 365 aaKnown RBP25.46■■□□□ 1.67
SMARCAL1-205ENST00000425815 MARCH10Q8NA82 808 aaPredicted RBP25.46■■□□□ 1.67
SMARCAL1-205ENST00000425815 POLR3GLQ9BT43 218 aa25.46■■□□□ 1.67
SMARCAL1-205ENST00000425815 PARP4Q9UKK3 1724 aaKnown RBP25.46■■□□□ 1.67
SMARCAL1-205ENST00000425815 NSD3Q9BZ95 1437 aa25.46■■□□□ 1.67
SMARCAL1-205ENST00000425815 MYOM1P52179 1685 aa25.45■■□□□ 1.66
SMARCAL1-205ENST00000425815 AMPHP49418 695 aa25.43■■□□□ 1.66
SMARCAL1-205ENST00000425815 LTV1Q96GA3 475 aaPredicted RBP25.43■■□□□ 1.66
SMARCAL1-205ENST00000425815 CAMKK2Q96RR4 588 aa25.43■■□□□ 1.66
SMARCAL1-205ENST00000425815 EXOC5O00471 708 aa25.42■■□□□ 1.66
SMARCAL1-205ENST00000425815 APBA3O96018 575 aa25.42■■□□□ 1.66
SMARCAL1-205ENST00000425815 EZH2Q15910 746 aaKnown RBP25.42■■□□□ 1.66
SMARCAL1-205ENST00000425815 LTN1O94822 1766 aa25.41■■□□□ 1.66
SMARCAL1-205ENST00000425815 LRRC37A3O60309 1634 aa25.41■■□□□ 1.66
SMARCAL1-205ENST00000425815 PTF1AQ7RTS3 328 aa25.4■■□□□ 1.66
SMARCAL1-205ENST00000425815 OVOS2A0A0G2JMS6 1433 aa25.38■■□□□ 1.65
SMARCAL1-205ENST00000425815 PEAK1Q9H792 1746 aa25.38■■□□□ 1.65
SMARCAL1-205ENST00000425815 IL2RBP14784 551 aa25.38■■□□□ 1.65
SMARCAL1-205ENST00000425815 PANK3Q9H999 370 aa25.38■■□□□ 1.65
SMARCAL1-205ENST00000425815 RGPD1P0DJD0 1748 aa25.37■■□□□ 1.65
SMARCAL1-205ENST00000425815 TNS1Q9HBL0 1735 aaKnown RBP25.37■■□□□ 1.65
SMARCAL1-205ENST00000425815 BCL9O00512 1426 aa25.37■■□□□ 1.65
SMARCAL1-205ENST00000425815 RTL1A6NKG5 1358 aa25.35■■□□□ 1.65
SMARCAL1-205ENST00000425815 HSP90AB2PQ58FF8 381 aa25.35■■□□□ 1.65
SMARCAL1-205ENST00000425815 CGNL1Q0VF96 1302 aa25.35■■□□□ 1.65
SMARCAL1-205ENST00000425815 WNK3Q9BYP7 1800 aa25.33■■□□□ 1.65
SMARCAL1-205ENST00000425815 NBPF6Q5VWK0 638 aa25.33■■□□□ 1.65
SMARCAL1-205ENST00000425815 NBPF4Q96M43 638 aa25.33■■□□□ 1.65
SMARCAL1-205ENST00000425815 EMILIN1Q9Y6C2 1016 aa25.33■■□□□ 1.65
SMARCAL1-205ENST00000425815 SRCAPQ6ZRS2 3230 aa25.33■■□□□ 1.64
SMARCAL1-205ENST00000425815 TNS2Q63HR2 1409 aa25.32■■□□□ 1.64
SMARCAL1-205ENST00000425815 BCL11BQ9C0K0 894 aaPredicted RBP25.32■■□□□ 1.64
SMARCAL1-205ENST00000425815 INSRP06213 1382 aa25.31■■□□□ 1.64
SMARCAL1-205ENST00000425815 KIF7Q2M1P5 1343 aa25.29■■□□□ 1.64
SMARCAL1-205ENST00000425815 KIF24Q5T7B8 1368 aa25.29■■□□□ 1.64
SMARCAL1-205ENST00000425815 PARD3Q8TEW0 1356 aa25.29■■□□□ 1.64
SMARCAL1-205ENST00000425815 KIF20BQ96Q89 1820 aa25.28■■□□□ 1.64
SMARCAL1-205ENST00000425815 PSDA5PKW4 1024 aaPredicted RBP25.28■■□□□ 1.64
SMARCAL1-205ENST00000425815 PLSCR1O15162 318 aa25.28■■□□□ 1.64
SMARCAL1-205ENST00000425815 KCNQ2O43526 872 aa25.28■■□□□ 1.64
SMARCAL1-205ENST00000425815 POLKQ9UBT6 870 aa25.28■■□□□ 1.64
SMARCAL1-205ENST00000425815 FLT4P35916 1363 aa25.28■■□□□ 1.64
SMARCAL1-205ENST00000425815 USHBP1Q8N6Y0 703 aa25.27■■□□□ 1.64
SMARCAL1-205ENST00000425815 PROM2Q8N271 834 aa25.26■■□□□ 1.63
SMARCAL1-205ENST00000425815 WASHC2AQ641Q2 1341 aa25.24■■□□□ 1.63
SMARCAL1-205ENST00000425815 R3HDM1Q15032 1099 aaKnown RBP25.24■■□□□ 1.63
SMARCAL1-205ENST00000425815 DDX54Q8TDD1 881 aaKnown RBP25.24■■□□□ 1.63
SMARCAL1-205ENST00000425815 ACSBG1Q96GR2 724 aa25.24■■□□□ 1.63
SMARCAL1-205ENST00000425815 PPM1GO15355 546 aaPredicted RBP25.23■■□□□ 1.63
SMARCAL1-205ENST00000425815 TNNT2P45379 298 aaPredicted RBP25.23■■□□□ 1.63
SMARCAL1-205ENST00000425815 FAM208AQ9UK61 1670 aaKnown RBP25.23■■□□□ 1.63
SMARCAL1-205ENST00000425815 MEGF6O75095 1541 aa25.22■■□□□ 1.63
SMARCAL1-205ENST00000425815 SBF2Q86WG5 1849 aa25.21■■□□□ 1.63
SMARCAL1-205ENST00000425815 ZCRB1Q8TBF4 217 aaKnown RBP25.21■■□□□ 1.63
SMARCAL1-205ENST00000425815 SMG6Q86US8 1419 aaKnown RBP25.19■■□□□ 1.62
SMARCAL1-205ENST00000425815 RGPD2P0DJD1 1756 aa25.18■■□□□ 1.62
SMARCAL1-205ENST00000425815 PER1O15534 1290 aaPredicted RBP25.18■■□□□ 1.62
SMARCAL1-205ENST00000425815 AMER1Q5JTC6 1135 aaPredicted RBP25.18■■□□□ 1.62
SMARCAL1-205ENST00000425815 KNSTRNQ9Y448 316 aa25.17■■□□□ 1.62
SMARCAL1-205ENST00000425815 NSD2O96028 1365 aa25.17■■□□□ 1.62
SMARCAL1-205ENST00000425815 EYA1Q99502 592 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms