RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 CRB1P82279 1406 aa30.3■■■□□ 2.44
CDCP1-202ENST00000425231 EDC4Q6P2E9 1401 aaKnown RBP30.3■■■□□ 2.44
CDCP1-202ENST00000425231 USP54Q70EL1 1684 aa30.29■■■□□ 2.44
CDCP1-202ENST00000425231 NINLQ9Y2I6 1382 aa30.28■■■□□ 2.44
CDCP1-202ENST00000425231 RGPD5Q99666 1765 aa30.25■■■□□ 2.43
CDCP1-202ENST00000425231 TMF1P82094 1093 aa30.24■■■□□ 2.43
CDCP1-202ENST00000425231 WDR17Q8IZU2 1322 aa30.24■■■□□ 2.43
CDCP1-202ENST00000425231 FAM196AQ6ZSG2 479 aa30.22■■■□□ 2.43
CDCP1-202ENST00000425231 TOM1L2Q6ZVM7 507 aa30.22■■■□□ 2.43
CDCP1-202ENST00000425231 PDE3BQ13370 1112 aa30.22■■■□□ 2.43
CDCP1-202ENST00000425231 PARP4Q9UKK3 1724 aaKnown RBP30.21■■■□□ 2.43
CDCP1-202ENST00000425231 RGPD1P0DJD0 1748 aa30.2■■■□□ 2.43
CDCP1-202ENST00000425231 BAG6P46379 1132 aa30.2■■■□□ 2.42
CDCP1-202ENST00000425231 OVOS2A0A0J9YW53 1432 aa30.19■■■□□ 2.42
CDCP1-202ENST00000425231 OVOS2Q6IE36 1432 aa30.19■■■□□ 2.42
CDCP1-202ENST00000425231 ABCC6O95255 1503 aa30.18■■■□□ 2.42
CDCP1-202ENST00000425231 ANKRD36BQ8N2N9 1353 aa30.17■■■□□ 2.42
CDCP1-202ENST00000425231 CCER1Q8TC90 406 aaPredicted RBP30.16■■■□□ 2.42
CDCP1-202ENST00000425231 TNS1Q9HBL0 1735 aaKnown RBP30.16■■■□□ 2.42
CDCP1-202ENST00000425231 TRIM37O94972 964 aa30.15■■■□□ 2.42
CDCP1-202ENST00000425231 CARD10Q9BWT7 1032 aa30.15■■■□□ 2.42
CDCP1-202ENST00000425231 CSB-PGBD3P0DP91 1061 aa30.14■■■□□ 2.42
CDCP1-202ENST00000425231 LTN1O94822 1766 aa30.14■■■□□ 2.42
CDCP1-202ENST00000425231 SRCAPQ6ZRS2 3230 aa30.14■■■□□ 2.42
CDCP1-202ENST00000425231 EN1Q05925 392 aaPredicted RBP30.13■■■□□ 2.41
CDCP1-202ENST00000425231 DISP2A7MBM2 1401 aa30.13■■■□□ 2.41
CDCP1-202ENST00000425231 CDCA8Q53HL2 280 aa30.13■■■□□ 2.41
CDCP1-202ENST00000425231 WNK3Q9BYP7 1800 aa30.11■■■□□ 2.41
CDCP1-202ENST00000425231 LRRC37A3O60309 1634 aa30.11■■■□□ 2.41
CDCP1-202ENST00000425231 DDB1Q16531 1140 aa30.1■■■□□ 2.41
CDCP1-202ENST00000425231 ERBB3P21860 1342 aa30.09■■■□□ 2.41
CDCP1-202ENST00000425231 CDCA7Q9BWT1 371 aaPredicted RBP30.09■■■□□ 2.41
CDCP1-202ENST00000425231 COG3Q96JB2 828 aa30.08■■■□□ 2.41
CDCP1-202ENST00000425231 PEAK1Q9H792 1746 aa30.06■■■□□ 2.4
CDCP1-202ENST00000425231 CCDC7Q96M83 1385 aa30.06■■■□□ 2.4
CDCP1-202ENST00000425231 FYB1O15117 783 aa30.05■■■□□ 2.4
CDCP1-202ENST00000425231 APBA3O96018 575 aa30.05■■■□□ 2.4
CDCP1-202ENST00000425231 CAMKK2Q96RR4 588 aa30.05■■■□□ 2.4
CDCP1-202ENST00000425231 C11orf95C9JLR9 678 aaPredicted RBP30.05■■■□□ 2.4
CDCP1-202ENST00000425231 EZH2Q15910 746 aaKnown RBP30.05■■■□□ 2.4
CDCP1-202ENST00000425231 OVOS2A0A0G2JMS6 1433 aa30.04■■■□□ 2.4
CDCP1-202ENST00000425231 ANKRD24Q8TF21 1146 aa30.04■■■□□ 2.4
CDCP1-202ENST00000425231 IP6K1Q92551 441 aa30.04■■■□□ 2.4
CDCP1-202ENST00000425231 FBLN1P23142 703 aa30.03■■■□□ 2.4
CDCP1-202ENST00000425231 MARCH10Q8NA82 808 aaPredicted RBP30.02■■■□□ 2.4
CDCP1-202ENST00000425231 NLRP2Q9NX02 1062 aa30.02■■■□□ 2.4
CDCP1-202ENST00000425231 MYOM1P52179 1685 aa30.01■■■□□ 2.4
CDCP1-202ENST00000425231 MAP3K19Q56UN5 1328 aa30■■■□□ 2.39
CDCP1-202ENST00000425231 GGNBP2Q9H3C7 697 aa30■■■□□ 2.39
CDCP1-202ENST00000425231 CARD14Q9BXL6 1004 aa29.99■■■□□ 2.39
CDCP1-202ENST00000425231 SBF2Q86WG5 1849 aa29.99■■■□□ 2.39
CDCP1-202ENST00000425231 EXOC5O00471 708 aa29.98■■■□□ 2.39
CDCP1-202ENST00000425231 PARD3Q8TEW0 1356 aa29.97■■■□□ 2.39
CDCP1-202ENST00000425231 BCL9O00512 1426 aa29.96■■■□□ 2.39
CDCP1-202ENST00000425231 HOXC9P31274 260 aa29.96■■■□□ 2.39
CDCP1-202ENST00000425231 EIF4G2P78344 907 aaKnown RBP eCLIP29.96■■■□□ 2.39
CDCP1-202ENST00000425231 PSDA5PKW4 1024 aaPredicted RBP29.95■■■□□ 2.38
CDCP1-202ENST00000425231 HSPA5P11021 654 aaKnown RBP29.94■■■□□ 2.38
CDCP1-202ENST00000425231 TNS2Q63HR2 1409 aa29.93■■■□□ 2.38
CDCP1-202ENST00000425231 IL2RBP14784 551 aa29.93■■■□□ 2.38
CDCP1-202ENST00000425231 AMPHP49418 695 aa29.93■■■□□ 2.38
CDCP1-202ENST00000425231 KIF20BQ96Q89 1820 aa29.92■■■□□ 2.38
CDCP1-202ENST00000425231 RRS1Q15050 365 aaKnown RBP29.92■■■□□ 2.38
CDCP1-202ENST00000425231 PTF1AQ7RTS3 328 aa29.92■■■□□ 2.38
CDCP1-202ENST00000425231 LTV1Q96GA3 475 aaPredicted RBP29.92■■■□□ 2.38
CDCP1-202ENST00000425231 RREB1Q92766 1687 aa29.91■■■□□ 2.38
CDCP1-202ENST00000425231 BCL11BQ9C0K0 894 aaPredicted RBP29.91■■■□□ 2.38
CDCP1-202ENST00000425231 NSD3Q9BZ95 1437 aa29.9■■■□□ 2.38
CDCP1-202ENST00000425231 FAM208AQ9UK61 1670 aaKnown RBP29.89■■■□□ 2.38
CDCP1-202ENST00000425231 R3HDM1Q15032 1099 aaKnown RBP29.88■■■□□ 2.37
CDCP1-202ENST00000425231 RTL1A6NKG5 1358 aa29.88■■■□□ 2.37
CDCP1-202ENST00000425231 PLSCR1O15162 318 aa29.88■■■□□ 2.37
CDCP1-202ENST00000425231 NUP188Q5SRE5 1749 aa29.86■■■□□ 2.37
CDCP1-202ENST00000425231 POLR3GLQ9BT43 218 aa29.85■■■□□ 2.37
CDCP1-202ENST00000425231 RGPD2P0DJD1 1756 aa29.83■■■□□ 2.37
CDCP1-202ENST00000425231 RGPD3A6NKT7 1758 aaPredicted RBP29.83■■■□□ 2.37
CDCP1-202ENST00000425231 RGPD4Q7Z3J3 1758 aa29.83■■■□□ 2.37
CDCP1-202ENST00000425231 KCNQ2O43526 872 aa29.8■■■□□ 2.36
CDCP1-202ENST00000425231 HSP90AB2PQ58FF8 381 aa29.79■■■□□ 2.36
CDCP1-202ENST00000425231 KIF24Q5T7B8 1368 aa29.79■■■□□ 2.36
CDCP1-202ENST00000425231 CGNL1Q0VF96 1302 aa29.79■■■□□ 2.36
CDCP1-202ENST00000425231 LRP5O75197 1615 aa29.79■■■□□ 2.36
CDCP1-202ENST00000425231 NBPF6Q5VWK0 638 aa29.79■■■□□ 2.36
CDCP1-202ENST00000425231 PROM2Q8N271 834 aa29.79■■■□□ 2.36
CDCP1-202ENST00000425231 NBPF4Q96M43 638 aa29.79■■■□□ 2.36
CDCP1-202ENST00000425231 INSRP06213 1382 aa29.79■■■□□ 2.36
CDCP1-202ENST00000425231 NBPF14Q5TI25 921 aa29.78■■■□□ 2.36
CDCP1-202ENST00000425231 FLT4P35916 1363 aa29.77■■■□□ 2.36
CDCP1-202ENST00000425231 ACSBG1Q96GR2 724 aa29.76■■■□□ 2.35
CDCP1-202ENST00000425231 EMILIN1Q9Y6C2 1016 aa29.76■■■□□ 2.35
CDCP1-202ENST00000425231 NHSQ6T4R5 1651 aa29.76■■■□□ 2.35
CDCP1-202ENST00000425231 PANK3Q9H999 370 aa29.74■■■□□ 2.35
CDCP1-202ENST00000425231 SMG6Q86US8 1419 aaKnown RBP29.73■■■□□ 2.35
CDCP1-202ENST00000425231 DDX54Q8TDD1 881 aaKnown RBP29.73■■■□□ 2.35
CDCP1-202ENST00000425231 MEGF6O75095 1541 aa29.73■■■□□ 2.35
CDCP1-202ENST00000425231 USHBP1Q8N6Y0 703 aa29.71■■■□□ 2.35
CDCP1-202ENST00000425231 TXNRD1Q16881 649 aa29.7■■■□□ 2.34
CDCP1-202ENST00000425231 ZCRB1Q8TBF4 217 aaKnown RBP29.7■■■□□ 2.34
CDCP1-202ENST00000425231 ANKRD26Q9UPS8 1709 aa29.69■■■□□ 2.34
CDCP1-202ENST00000425231 MAP2P11137 1827 aaKnown RBP29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms