RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 QTRT2Q9H974 415 aaKnown RBP29.92■■■□□ 2.38
HMGA2-205ENST00000425208 MAP3K19Q56UN5 1328 aa29.92■■■□□ 2.38
HMGA2-205ENST00000425208 POTEAQ6S8J7 498 aa29.91■■■□□ 2.38
HMGA2-205ENST00000425208 COL5A2P05997 1499 aaPredicted RBP29.91■■■□□ 2.38
HMGA2-205ENST00000425208 RRS1Q15050 365 aaKnown RBP29.9■■■□□ 2.38
HMGA2-205ENST00000425208 CC2D1BQ5T0F9 858 aaKnown RBP29.9■■■□□ 2.38
HMGA2-205ENST00000425208 MAP2P11137 1827 aaKnown RBP29.9■■■□□ 2.38
HMGA2-205ENST00000425208 STRN4Q9NRL3 753 aa29.89■■■□□ 2.38
HMGA2-205ENST00000425208 RTL1A6NKG5 1358 aa29.88■■■□□ 2.37
HMGA2-205ENST00000425208 TNNT2P45379 298 aaPredicted RBP29.88■■■□□ 2.37
HMGA2-205ENST00000425208 EVA1CP58658 441 aa29.88■■■□□ 2.37
HMGA2-205ENST00000425208 AMPHP49418 695 aa29.88■■■□□ 2.37
HMGA2-205ENST00000425208 VPS72Q15906 364 aa29.88■■■□□ 2.37
HMGA2-205ENST00000425208 AXIN2Q9Y2T1 843 aa29.88■■■□□ 2.37
HMGA2-205ENST00000425208 BLMP54132 1417 aaPredicted RBP29.87■■■□□ 2.37
HMGA2-205ENST00000425208 KIF24Q5T7B8 1368 aa29.85■■■□□ 2.37
HMGA2-205ENST00000425208 IP6K1Q92551 441 aa29.85■■■□□ 2.37
HMGA2-205ENST00000425208 CCDC9Q9Y3X0 531 aaKnown RBP29.85■■■□□ 2.37
HMGA2-205ENST00000425208 CNGB1Q14028 1251 aaPredicted RBP29.84■■■□□ 2.37
HMGA2-205ENST00000425208 PEAK1Q9H792 1746 aa29.84■■■□□ 2.37
HMGA2-205ENST00000425208 RXRBP28702 533 aa29.83■■■□□ 2.37
HMGA2-205ENST00000425208 HOXC9P31274 260 aa29.83■■■□□ 2.37
HMGA2-205ENST00000425208 RBM6P78332 1123 aaKnown RBP29.83■■■□□ 2.37
HMGA2-205ENST00000425208 GJD4Q96KN9 370 aaPredicted RBP29.83■■■□□ 2.37
HMGA2-205ENST00000425208 FLT4P35916 1363 aa29.83■■■□□ 2.37
HMGA2-205ENST00000425208 EMILIN1Q9Y6C2 1016 aa29.82■■■□□ 2.36
HMGA2-205ENST00000425208 GLI3P10071 1580 aa29.81■■■□□ 2.36
HMGA2-205ENST00000425208 LARP1Q6PKG0 1096 aaKnown RBP29.8■■■□□ 2.36
HMGA2-205ENST00000425208 POLKQ9UBT6 870 aa29.8■■■□□ 2.36
HMGA2-205ENST00000425208 ERBB3P21860 1342 aa29.8■■■□□ 2.36
HMGA2-205ENST00000425208 WDR17Q8IZU2 1322 aa29.8■■■□□ 2.36
HMGA2-205ENST00000425208 CRB1P82279 1406 aa29.8■■■□□ 2.36
HMGA2-205ENST00000425208 CSB-PGBD3P0DP91 1061 aa29.79■■■□□ 2.36
HMGA2-205ENST00000425208 SPATA31A5Q5VU36 1347 aa29.79■■■□□ 2.36
HMGA2-205ENST00000425208 SPATA31A7Q8IWB4 1347 aa29.79■■■□□ 2.36
HMGA2-205ENST00000425208 PPM1GO15355 546 aaPredicted RBP29.79■■■□□ 2.36
HMGA2-205ENST00000425208 ILDR2Q71H61 639 aa29.79■■■□□ 2.36
HMGA2-205ENST00000425208 SMG6Q86US8 1419 aaKnown RBP29.78■■■□□ 2.36
HMGA2-205ENST00000425208 FAM208AQ9UK61 1670 aaKnown RBP29.78■■■□□ 2.36
HMGA2-205ENST00000425208 TOM1L2Q6ZVM7 507 aa29.77■■■□□ 2.36
HMGA2-205ENST00000425208 ANKRD24Q8TF21 1146 aa29.77■■■□□ 2.36
HMGA2-205ENST00000425208 SPATA31A1Q5TZJ5 1347 aa29.76■■■□□ 2.36
HMGA2-205ENST00000425208 INSRP06213 1382 aa29.76■■■□□ 2.35
HMGA2-205ENST00000425208 CDK12Q9NYV4 1490 aaPredicted RBP29.75■■■□□ 2.35
HMGA2-205ENST00000425208 HSP90AB2PQ58FF8 381 aa29.74■■■□□ 2.35
HMGA2-205ENST00000425208 LTV1Q96GA3 475 aaPredicted RBP29.73■■■□□ 2.35
HMGA2-205ENST00000425208 USP35Q9P2H5 1018 aa29.73■■■□□ 2.35
HMGA2-205ENST00000425208 TCP11L2Q8N4U5 519 aa29.7■■■□□ 2.34
HMGA2-205ENST00000425208 CARD10Q9BWT7 1032 aa29.7■■■□□ 2.34
HMGA2-205ENST00000425208 THRAP3Q9Y2W1 955 aaKnown RBP29.7■■■□□ 2.34
HMGA2-205ENST00000425208 RGS12O14924 1447 aa29.69■■■□□ 2.34
HMGA2-205ENST00000425208 NLRP2Q9NX02 1062 aa29.69■■■□□ 2.34
HMGA2-205ENST00000425208 PARD3Q8TEW0 1356 aa29.69■■■□□ 2.34
HMGA2-205ENST00000425208 FAM98CQ17RN3 349 aaKnown RBP29.68■■■□□ 2.34
HMGA2-205ENST00000425208 RGPD2P0DJD1 1756 aa29.67■■■□□ 2.34
HMGA2-205ENST00000425208 WNK3Q9BYP7 1800 aa29.67■■■□□ 2.34
HMGA2-205ENST00000425208 MTHFSP49914 203 aa29.66■■■□□ 2.34
HMGA2-205ENST00000425208 BARGINQ6ZT62 677 aa29.66■■■□□ 2.34
HMGA2-205ENST00000425208 THSD7AQ9UPZ6 1657 aa29.65■■■□□ 2.34
HMGA2-205ENST00000425208 A0A0G2JS52 829 aa29.64■■■□□ 2.34
HMGA2-205ENST00000425208 ONECUT3O60422 494 aaPredicted RBP29.64■■■□□ 2.34
HMGA2-205ENST00000425208 MYT1Q01538 1121 aa29.64■■■□□ 2.34
HMGA2-205ENST00000425208 PPP2R1AP30153 589 aa29.62■■■□□ 2.33
HMGA2-205ENST00000425208 RALBP1Q15311 655 aa29.62■■■□□ 2.33
HMGA2-205ENST00000425208 SEPT12Q8IYM1 358 aa29.62■■■□□ 2.33
HMGA2-205ENST00000425208 EIF4A2Q14240 407 aaKnown RBP29.6■■■□□ 2.33
HMGA2-205ENST00000425208 PARP4Q9UKK3 1724 aaKnown RBP29.59■■■□□ 2.33
HMGA2-205ENST00000425208 BRWD3Q6RI45 1802 aa29.59■■■□□ 2.33
HMGA2-205ENST00000425208 NBPF6Q5VWK0 638 aa29.58■■■□□ 2.33
HMGA2-205ENST00000425208 NBPF4Q96M43 638 aa29.58■■■□□ 2.33
HMGA2-205ENST00000425208 CDCA7Q9BWT1 371 aaPredicted RBP29.58■■■□□ 2.33
HMGA2-205ENST00000425208 DISP2A7MBM2 1401 aa29.56■■■□□ 2.32
HMGA2-205ENST00000425208 LRRC37A3O60309 1634 aa29.55■■■□□ 2.32
HMGA2-205ENST00000425208 USHBP1Q8N6Y0 703 aa29.54■■■□□ 2.32
HMGA2-205ENST00000425208 CFAP53Q96M91 514 aa29.54■■■□□ 2.32
HMGA2-205ENST00000425208 COL3A1P02461 1466 aaPredicted RBP29.54■■■□□ 2.32
HMGA2-205ENST00000425208 IL2RBP14784 551 aa29.54■■■□□ 2.32
HMGA2-205ENST00000425208 EYA1Q99502 592 aa29.53■■■□□ 2.32
HMGA2-205ENST00000425208 PRKRIP1Q9H875 184 aaPredicted RBP29.53■■■□□ 2.32
HMGA2-205ENST00000425208 NCAPD2Q15021 1401 aa29.52■■■□□ 2.32
HMGA2-205ENST00000425208 DIAPH1O60610 1272 aaKnown RBP29.51■■■□□ 2.31
HMGA2-205ENST00000425208 RGPD1P0DJD0 1748 aa29.51■■■□□ 2.31
HMGA2-205ENST00000425208 IL13P35225 146 aa29.51■■■□□ 2.31
HMGA2-205ENST00000425208 MYBBP1AQ9BQG0 1328 aaKnown RBP29.51■■■□□ 2.31
HMGA2-205ENST00000425208 IGSF1Q8N6C5 1336 aa29.5■■■□□ 2.31
HMGA2-205ENST00000425208 DDB1Q16531 1140 aa29.49■■■□□ 2.31
HMGA2-205ENST00000425208 KRT27Q7Z3Y8 459 aa29.49■■■□□ 2.31
HMGA2-205ENST00000425208 RAPGEF4Q8WZA2 1011 aa29.48■■■□□ 2.31
HMGA2-205ENST00000425208 MEGF6O75095 1541 aa29.48■■■□□ 2.31
HMGA2-205ENST00000425208 TNS2Q63HR2 1409 aa29.47■■■□□ 2.31
HMGA2-205ENST00000425208 PDE3BQ13370 1112 aa29.46■■■□□ 2.31
HMGA2-205ENST00000425208 SOCS7O14512 581 aa29.45■■■□□ 2.3
HMGA2-205ENST00000425208 OVOS2A0A0G2JMS6 1433 aa29.44■■■□□ 2.3
HMGA2-205ENST00000425208 EXOC5O00471 708 aa29.44■■■□□ 2.3
HMGA2-205ENST00000425208 ANP32CO43423 234 aa29.44■■■□□ 2.3
HMGA2-205ENST00000425208 TATP17735 454 aaPredicted RBP29.44■■■□□ 2.3
HMGA2-205ENST00000425208 EP400Q96L91 3159 aa29.41■■■□□ 2.3
HMGA2-205ENST00000425208 KDRP35968 1356 aa29.4■■■□□ 2.3
HMGA2-205ENST00000425208 U2SURPO15042 1029 aaKnown RBP29.4■■■□□ 2.3
HMGA2-205ENST00000425208 SULT6B1Q6IMI4 303 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms