RNA–Protein interactions for RNA: ENST00000425203.1

LIMK2-205, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best)

Gene LIMK2, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-205ENST00000425203 KCNH5Q8NCM2 988 aa21.67■■□□□ 1.06
LIMK2-205ENST00000425203 PTF1AQ7RTS3 328 aa21.66■■□□□ 1.06
LIMK2-205ENST00000425203 SLIT3O75094 1523 aa21.65■■□□□ 1.06
LIMK2-205ENST00000425203 CARD10Q9BWT7 1032 aa21.65■■□□□ 1.06
LIMK2-205ENST00000425203 ANO8Q9HCE9 1232 aaPredicted RBP21.65■■□□□ 1.06
LIMK2-205ENST00000425203 PEAK1Q9H792 1746 aa21.65■■□□□ 1.06
LIMK2-205ENST00000425203 TTC21BQ7Z4L5 1316 aa21.64■■□□□ 1.05
LIMK2-205ENST00000425203 EXOC5O00471 708 aa21.64■■□□□ 1.05
LIMK2-205ENST00000425203 BCL9O00512 1426 aa21.63■■□□□ 1.05
LIMK2-205ENST00000425203 CSB-PGBD3P0DP91 1061 aa21.63■■□□□ 1.05
LIMK2-205ENST00000425203 L3MBTL2Q969R5 705 aa21.63■■□□□ 1.05
LIMK2-205ENST00000425203 SBF2Q86WG5 1849 aa21.61■■□□□ 1.05
LIMK2-205ENST00000425203 COL18A1P39060 1754 aa21.61■■□□□ 1.05
LIMK2-205ENST00000425203 UTRNP46939 3433 aa21.61■■□□□ 1.05
LIMK2-205ENST00000425203 TTC21AQ8NDW8 1320 aa21.6■■□□□ 1.05
LIMK2-205ENST00000425203 TXNRD1Q16881 649 aa21.6■■□□□ 1.05
LIMK2-205ENST00000425203 PDGFDQ9GZP0 370 aaPredicted RBP21.6■■□□□ 1.05
LIMK2-205ENST00000425203 RGPD3A6NKT7 1758 aaPredicted RBP21.6■■□□□ 1.05
LIMK2-205ENST00000425203 RGPD4Q7Z3J3 1758 aa21.6■■□□□ 1.05
LIMK2-205ENST00000425203 CPSF1Q10570 1443 aaKnown RBP21.6■■□□□ 1.05
LIMK2-205ENST00000425203 LRRC37A3O60309 1634 aa21.59■■□□□ 1.05
LIMK2-205ENST00000425203 SOX12O15370 315 aa21.59■■□□□ 1.05
LIMK2-205ENST00000425203 QRICH2Q9H0J4 1663 aa21.59■■□□□ 1.05
LIMK2-205ENST00000425203 ZBTB7AO95365 584 aa21.58■■□□□ 1.05
LIMK2-205ENST00000425203 STK32BQ9NY57 414 aa21.58■■□□□ 1.05
LIMK2-205ENST00000425203 SLC15A2Q16348 729 aa21.57■■□□□ 1.04
LIMK2-205ENST00000425203 PIK3C2AO00443 1686 aa21.56■■□□□ 1.04
LIMK2-205ENST00000425203 PTGER2P43116 358 aa21.56■■□□□ 1.04
LIMK2-205ENST00000425203 ATF5Q9Y2D1 282 aaPredicted RBP21.56■■□□□ 1.04
LIMK2-205ENST00000425203 CCDC7Q96M83 1385 aa21.55■■□□□ 1.04
LIMK2-205ENST00000425203 KTN1Q86UP2 1357 aaKnown RBP21.53■■□□□ 1.04
LIMK2-205ENST00000425203 MTFR1LQ9H019 292 aa21.52■■□□□ 1.04
LIMK2-205ENST00000425203 CASZ1Q86V15 1759 aa21.51■■□□□ 1.03
LIMK2-205ENST00000425203 ROCK2O75116 1388 aaKnown RBP21.51■■□□□ 1.03
LIMK2-205ENST00000425203 SYT17Q9BSW7 474 aa21.51■■□□□ 1.03
LIMK2-205ENST00000425203 TRPM1Q7Z4N2 1603 aa21.51■■□□□ 1.03
LIMK2-205ENST00000425203 SIN3AQ96ST3 1273 aa21.5■■□□□ 1.03
LIMK2-205ENST00000425203 RGPD5Q99666 1765 aa21.49■■□□□ 1.03
LIMK2-205ENST00000425203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.49■■□□□ 1.03
LIMK2-205ENST00000425203 NLRP2Q9NX02 1062 aa21.49■■□□□ 1.03
LIMK2-205ENST00000425203 AKAP12Q02952 1782 aa21.48■■□□□ 1.03
LIMK2-205ENST00000425203 ACSBG1Q96GR2 724 aa21.48■■□□□ 1.03
LIMK2-205ENST00000425203 FHDC1Q9C0D6 1143 aaPredicted RBP21.48■■□□□ 1.03
LIMK2-205ENST00000425203 NFAT5O94916 1531 aa21.47■■□□□ 1.03
LIMK2-205ENST00000425203 NEUROD1Q13562 356 aa21.47■■□□□ 1.03
LIMK2-205ENST00000425203 SGIP1Q9BQI5 828 aa21.47■■□□□ 1.03
LIMK2-205ENST00000425203 WNK3Q9BYP7 1800 aa21.47■■□□□ 1.03
LIMK2-205ENST00000425203 ERBB3P21860 1342 aa21.47■■□□□ 1.03
LIMK2-205ENST00000425203 USP31Q70CQ4 1352 aa21.47■■□□□ 1.03
LIMK2-205ENST00000425203 TNS2Q63HR2 1409 aa21.46■■□□□ 1.03
LIMK2-205ENST00000425203 IL2RBP14784 551 aa21.46■■□□□ 1.03
LIMK2-205ENST00000425203 ZNF784Q8NCA9 323 aaPredicted RBP21.45■■□□□ 1.02
LIMK2-205ENST00000425203 ABCC6O95255 1503 aa21.45■■□□□ 1.02
LIMK2-205ENST00000425203 NME9Q86XW9 330 aa21.43■■□□□ 1.02
LIMK2-205ENST00000425203 ARXQ96QS3 562 aa21.43■■□□□ 1.02
LIMK2-205ENST00000425203 TMC1Q8TDI8 760 aa21.42■■□□□ 1.02
LIMK2-205ENST00000425203 ANKRD24Q8TF21 1146 aa21.42■■□□□ 1.02
LIMK2-205ENST00000425203 KAT6BQ8WYB5 2073 aa21.41■■□□□ 1.02
LIMK2-205ENST00000425203 SBNO2Q9Y2G9 1366 aa21.41■■□□□ 1.02
LIMK2-205ENST00000425203 HDGFL2Q7Z4V5 671 aaPredicted RBP21.41■■□□□ 1.02
LIMK2-205ENST00000425203 MYOM1P52179 1685 aa21.4■■□□□ 1.02
LIMK2-205ENST00000425203 SLC12A5Q9H2X9 1139 aa21.39■■□□□ 1.01
LIMK2-205ENST00000425203 CARD11Q9BXL7 1154 aa21.38■■□□□ 1.01
LIMK2-205ENST00000425203 LRRC4BQ9NT99 713 aa21.38■■□□□ 1.01
LIMK2-205ENST00000425203 TERF2IPQ9NYB0 399 aa21.38■■□□□ 1.01
LIMK2-205ENST00000425203 SLC16A10Q8TF71 515 aa21.37■■□□□ 1.01
LIMK2-205ENST00000425203 NHSQ6T4R5 1651 aa21.37■■□□□ 1.01
LIMK2-205ENST00000425203 ZNF827Q17R98 1081 aa21.36■■□□□ 1.01
LIMK2-205ENST00000425203 SLC27A3Q5K4L6 730 aa21.36■■□□□ 1.01
LIMK2-205ENST00000425203 IP6K1Q92551 441 aa21.36■■□□□ 1.01
LIMK2-205ENST00000425203 CD163L1Q9NR16 1453 aa21.36■■□□□ 1.01
LIMK2-205ENST00000425203 MAP3K5Q99683 1374 aa21.36■■□□□ 1.01
LIMK2-205ENST00000425203 DDX54Q8TDD1 881 aaKnown RBP21.35■■□□□ 1.01
LIMK2-205ENST00000425203 PUS7Q96PZ0 661 aaKnown RBP21.35■■□□□ 1.01
LIMK2-205ENST00000425203 MON2Q7Z3U7 1717 aa21.35■■□□□ 1.01
LIMK2-205ENST00000425203 AKT1S1Q96B36 256 aa21.34■■□□□ 1.01
LIMK2-205ENST00000425203 EDC4Q6P2E9 1401 aaKnown RBP21.33■■□□□ 1.01
LIMK2-205ENST00000425203 GPR162Q16538 588 aa21.32■■□□□ 1
LIMK2-205ENST00000425203 GOLGB1Q14789 3259 aaKnown RBP21.32■■□□□ 1
LIMK2-205ENST00000425203 POLD1P28340 1107 aa21.31■■□□□ 1
LIMK2-205ENST00000425203 USP54Q70EL1 1684 aa21.31■■□□□ 1
LIMK2-205ENST00000425203 BTAF1O14981 1849 aa21.3■■□□□ 1
LIMK2-205ENST00000425203 CHD4Q14839 1912 aa21.3■■□□□ 1
LIMK2-205ENST00000425203 LTV1Q96GA3 475 aaPredicted RBP21.3■■□□□ 1
LIMK2-205ENST00000425203 PAPPAQ13219 1627 aa21.29■■□□□ 1
LIMK2-205ENST00000425203 LTN1O94822 1766 aa21.29■■□□□ 1
LIMK2-205ENST00000425203 PRIM1P49642 420 aaKnown RBP21.29■■□□□ 1
LIMK2-205ENST00000425203 TFCP2L1Q9NZI6 479 aa21.29■■□□□ 1
LIMK2-205ENST00000425203 A0A1W2PP64 1363 aa21.28■■□□□ 1
LIMK2-205ENST00000425203 C1QTNF8P60827 252 aa21.28■■□□□ 1
LIMK2-205ENST00000425203 SYTL4Q96C24 671 aaPredicted RBP21.28■■□□□ 1
LIMK2-205ENST00000425203 PNPLA7Q6ZV29 1317 aa21.27■□□□□ 0.99
LIMK2-205ENST00000425203 COG3Q96JB2 828 aa21.26■□□□□ 0.99
LIMK2-205ENST00000425203 SLC24A1O60721 1099 aa21.25■□□□□ 0.99
LIMK2-205ENST00000425203 AMPHP49418 695 aa21.25■□□□□ 0.99
LIMK2-205ENST00000425203 KLHL34Q8N239 644 aa21.25■□□□□ 0.99
LIMK2-205ENST00000425203 ZCRB1Q8TBF4 217 aaKnown RBP21.25■□□□□ 0.99
LIMK2-205ENST00000425203 ANKRD36BQ8N2N9 1353 aa21.24■□□□□ 0.99
LIMK2-205ENST00000425203 SENP3-EIF4A1A0A087X0R7 540 aa21.24■□□□□ 0.99
LIMK2-205ENST00000425203 HOXC9P31274 260 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms