RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 A0A1W2PP64 1363 aa23.25■■□□□ 1.31
SHANK2-207ENST00000425049 TMF1P82094 1093 aa23.24■■□□□ 1.31
SHANK2-207ENST00000425049 FAM196AQ6ZSG2 479 aa23.24■■□□□ 1.31
SHANK2-207ENST00000425049 NME9Q86XW9 330 aa23.24■■□□□ 1.31
SHANK2-207ENST00000425049 USP31Q70CQ4 1352 aa23.24■■□□□ 1.31
SHANK2-207ENST00000425049 CSB-PGBD3P0DP91 1061 aa23.23■■□□□ 1.31
SHANK2-207ENST00000425049 NFAT5O94916 1531 aa23.23■■□□□ 1.31
SHANK2-207ENST00000425049 WDR17Q8IZU2 1322 aa23.22■■□□□ 1.31
SHANK2-207ENST00000425049 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
SHANK2-207ENST00000425049 ABCC6O95255 1503 aa23.19■■□□□ 1.3
SHANK2-207ENST00000425049 CDCA8Q53HL2 280 aa23.19■■□□□ 1.3
SHANK2-207ENST00000425049 AXIN2Q9Y2T1 843 aa23.19■■□□□ 1.3
SHANK2-207ENST00000425049 COL18A1P39060 1754 aa23.19■■□□□ 1.3
SHANK2-207ENST00000425049 CCER1Q8TC90 406 aaPredicted RBP23.18■■□□□ 1.3
SHANK2-207ENST00000425049 USP54Q70EL1 1684 aa23.18■■□□□ 1.3
SHANK2-207ENST00000425049 TRIM37O94972 964 aa23.17■■□□□ 1.3
SHANK2-207ENST00000425049 CDCA7Q9BWT1 371 aaPredicted RBP23.16■■□□□ 1.3
SHANK2-207ENST00000425049 PARP4Q9UKK3 1724 aaKnown RBP23.16■■□□□ 1.3
SHANK2-207ENST00000425049 ANKRD36BQ8N2N9 1353 aa23.15■■□□□ 1.3
SHANK2-207ENST00000425049 C11orf95C9JLR9 678 aaPredicted RBP23.15■■□□□ 1.3
SHANK2-207ENST00000425049 DDB1Q16531 1140 aa23.15■■□□□ 1.3
SHANK2-207ENST00000425049 EN1Q05925 392 aaPredicted RBP23.14■■□□□ 1.29
SHANK2-207ENST00000425049 CARD10Q9BWT7 1032 aa23.14■■□□□ 1.29
SHANK2-207ENST00000425049 OVOS2A0A0J9YW53 1432 aa23.14■■□□□ 1.29
SHANK2-207ENST00000425049 DISP2A7MBM2 1401 aa23.14■■□□□ 1.29
SHANK2-207ENST00000425049 OVOS2Q6IE36 1432 aa23.14■■□□□ 1.29
SHANK2-207ENST00000425049 COG3Q96JB2 828 aa23.13■■□□□ 1.29
SHANK2-207ENST00000425049 OVOS2A0A0G2JMS6 1433 aa23.12■■□□□ 1.29
SHANK2-207ENST00000425049 TNS1Q9HBL0 1735 aaKnown RBP23.12■■□□□ 1.29
SHANK2-207ENST00000425049 CCDC7Q96M83 1385 aa23.12■■□□□ 1.29
SHANK2-207ENST00000425049 LRRC37A3O60309 1634 aa23.11■■□□□ 1.29
SHANK2-207ENST00000425049 RGPD5Q99666 1765 aa23.1■■□□□ 1.29
SHANK2-207ENST00000425049 APBA3O96018 575 aa23.1■■□□□ 1.29
SHANK2-207ENST00000425049 LTN1O94822 1766 aa23.09■■□□□ 1.29
SHANK2-207ENST00000425049 NLRP2Q9NX02 1062 aa23.09■■□□□ 1.29
SHANK2-207ENST00000425049 ERBB3P21860 1342 aa23.08■■□□□ 1.29
SHANK2-207ENST00000425049 WNK3Q9BYP7 1800 aa23.08■■□□□ 1.29
SHANK2-207ENST00000425049 PARD3Q8TEW0 1356 aa23.07■■□□□ 1.28
SHANK2-207ENST00000425049 ANKRD24Q8TF21 1146 aa23.06■■□□□ 1.28
SHANK2-207ENST00000425049 EZH2Q15910 746 aaKnown RBP23.05■■□□□ 1.28
SHANK2-207ENST00000425049 EXOC5O00471 708 aa23.04■■□□□ 1.28
SHANK2-207ENST00000425049 PSDA5PKW4 1024 aaPredicted RBP23.03■■□□□ 1.28
SHANK2-207ENST00000425049 AMPHP49418 695 aa23.02■■□□□ 1.28
SHANK2-207ENST00000425049 IP6K1Q92551 441 aa23.02■■□□□ 1.28
SHANK2-207ENST00000425049 CAMKK2Q96RR4 588 aa23.02■■□□□ 1.28
SHANK2-207ENST00000425049 SRCAPQ6ZRS2 3230 aa23.01■■□□□ 1.27
SHANK2-207ENST00000425049 TNS2Q63HR2 1409 aa23.01■■□□□ 1.27
SHANK2-207ENST00000425049 LTV1Q96GA3 475 aaPredicted RBP23.01■■□□□ 1.27
SHANK2-207ENST00000425049 GGNBP2Q9H3C7 697 aa23.01■■□□□ 1.27
SHANK2-207ENST00000425049 PEAK1Q9H792 1746 aa23■■□□□ 1.27
SHANK2-207ENST00000425049 IL2RBP14784 551 aa23■■□□□ 1.27
SHANK2-207ENST00000425049 MARCH10Q8NA82 808 aaPredicted RBP23■■□□□ 1.27
SHANK2-207ENST00000425049 POLR3GLQ9BT43 218 aa23■■□□□ 1.27
SHANK2-207ENST00000425049 MAP3K19Q56UN5 1328 aa23■■□□□ 1.27
SHANK2-207ENST00000425049 FYB1O15117 783 aa22.99■■□□□ 1.27
SHANK2-207ENST00000425049 EIF4G2P78344 907 aaKnown RBP eCLIP22.99■■□□□ 1.27
SHANK2-207ENST00000425049 RTL1A6NKG5 1358 aa22.98■■□□□ 1.27
SHANK2-207ENST00000425049 HOXC9P31274 260 aa22.97■■□□□ 1.27
SHANK2-207ENST00000425049 R3HDM1Q15032 1099 aaKnown RBP22.97■■□□□ 1.27
SHANK2-207ENST00000425049 BCL11BQ9C0K0 894 aaPredicted RBP22.97■■□□□ 1.27
SHANK2-207ENST00000425049 BCL9O00512 1426 aa22.97■■□□□ 1.27
SHANK2-207ENST00000425049 NSD3Q9BZ95 1437 aa22.97■■□□□ 1.27
SHANK2-207ENST00000425049 FAM208AQ9UK61 1670 aaKnown RBP22.97■■□□□ 1.27
SHANK2-207ENST00000425049 NBPF14Q5TI25 921 aa22.96■■□□□ 1.27
SHANK2-207ENST00000425049 MYOM1P52179 1685 aa22.96■■□□□ 1.27
SHANK2-207ENST00000425049 KIF20BQ96Q89 1820 aa22.96■■□□□ 1.27
SHANK2-207ENST00000425049 SMG6Q86US8 1419 aaKnown RBP22.94■■□□□ 1.26
SHANK2-207ENST00000425049 RRS1Q15050 365 aaKnown RBP22.94■■□□□ 1.26
SHANK2-207ENST00000425049 RREB1Q92766 1687 aa22.93■■□□□ 1.26
SHANK2-207ENST00000425049 FBLN1P23142 703 aa22.93■■□□□ 1.26
SHANK2-207ENST00000425049 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
SHANK2-207ENST00000425049 SBF2Q86WG5 1849 aa22.92■■□□□ 1.26
SHANK2-207ENST00000425049 CGNL1Q0VF96 1302 aa22.91■■□□□ 1.26
SHANK2-207ENST00000425049 CARD14Q9BXL6 1004 aa22.91■■□□□ 1.26
SHANK2-207ENST00000425049 PLSCR1O15162 318 aa22.9■■□□□ 1.26
SHANK2-207ENST00000425049 NUP188Q5SRE5 1749 aa22.9■■□□□ 1.26
SHANK2-207ENST00000425049 LRP5O75197 1615 aa22.9■■□□□ 1.26
SHANK2-207ENST00000425049 RGPD3A6NKT7 1758 aaPredicted RBP22.89■■□□□ 1.26
SHANK2-207ENST00000425049 RGPD4Q7Z3J3 1758 aa22.89■■□□□ 1.26
SHANK2-207ENST00000425049 FLT4P35916 1363 aa22.88■■□□□ 1.25
SHANK2-207ENST00000425049 PTF1AQ7RTS3 328 aa22.87■■□□□ 1.25
SHANK2-207ENST00000425049 KIF24Q5T7B8 1368 aa22.87■■□□□ 1.25
SHANK2-207ENST00000425049 DDX54Q8TDD1 881 aaKnown RBP22.85■■□□□ 1.25
SHANK2-207ENST00000425049 ACSBG1Q96GR2 724 aa22.85■■□□□ 1.25
SHANK2-207ENST00000425049 INSRP06213 1382 aa22.85■■□□□ 1.25
SHANK2-207ENST00000425049 NHSQ6T4R5 1651 aa22.84■■□□□ 1.25
SHANK2-207ENST00000425049 PPM1GO15355 546 aaPredicted RBP22.83■■□□□ 1.25
SHANK2-207ENST00000425049 KCNQ2O43526 872 aa22.83■■□□□ 1.25
SHANK2-207ENST00000425049 RAPGEF4Q8WZA2 1011 aa22.83■■□□□ 1.25
SHANK2-207ENST00000425049 HSP90AB2PQ58FF8 381 aa22.82■■□□□ 1.24
SHANK2-207ENST00000425049 NBPF6Q5VWK0 638 aa22.81■■□□□ 1.24
SHANK2-207ENST00000425049 NBPF4Q96M43 638 aa22.81■■□□□ 1.24
SHANK2-207ENST00000425049 TXNRD1Q16881 649 aa22.8■■□□□ 1.24
SHANK2-207ENST00000425049 USHBP1Q8N6Y0 703 aa22.8■■□□□ 1.24
SHANK2-207ENST00000425049 ZCRB1Q8TBF4 217 aaKnown RBP22.8■■□□□ 1.24
SHANK2-207ENST00000425049 EMILIN1Q9Y6C2 1016 aa22.8■■□□□ 1.24
SHANK2-207ENST00000425049 MEGF6O75095 1541 aa22.8■■□□□ 1.24
SHANK2-207ENST00000425049 RGPD2P0DJD1 1756 aa22.78■■□□□ 1.24
SHANK2-207ENST00000425049 TATP17735 454 aaPredicted RBP22.78■■□□□ 1.24
SHANK2-207ENST00000425049 PANK3Q9H999 370 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms