RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 COL18A1P39060 1754 aa23.25■■□□□ 1.31
PUDP-203ENST00000424830 AKAP12Q02952 1782 aa23.25■■□□□ 1.31
PUDP-203ENST00000424830 WDR17Q8IZU2 1322 aa23.25■■□□□ 1.31
PUDP-203ENST00000424830 CDCA7Q9BWT1 371 aaPredicted RBP23.25■■□□□ 1.31
PUDP-203ENST00000424830 BCL11BQ9C0K0 894 aaPredicted RBP23.25■■□□□ 1.31
PUDP-203ENST00000424830 CPSF1Q10570 1443 aaKnown RBP23.25■■□□□ 1.31
PUDP-203ENST00000424830 EVC2Q86UK5 1308 aa23.24■■□□□ 1.31
PUDP-203ENST00000424830 KCNH5Q8NCM2 988 aa23.22■■□□□ 1.31
PUDP-203ENST00000424830 TRPM1Q7Z4N2 1603 aa23.22■■□□□ 1.31
PUDP-203ENST00000424830 BCL9O00512 1426 aa23.21■■□□□ 1.31
PUDP-203ENST00000424830 CASZ1Q86V15 1759 aa23.21■■□□□ 1.31
PUDP-203ENST00000424830 ANO8Q9HCE9 1232 aaPredicted RBP23.21■■□□□ 1.31
PUDP-203ENST00000424830 AXIN2Q9Y2T1 843 aa23.21■■□□□ 1.31
PUDP-203ENST00000424830 CSB-PGBD3P0DP91 1061 aa23.2■■□□□ 1.3
PUDP-203ENST00000424830 MARCH10Q8NA82 808 aaPredicted RBP23.19■■□□□ 1.3
PUDP-203ENST00000424830 ZNF692Q9BU19 519 aaPredicted RBP23.19■■□□□ 1.3
PUDP-203ENST00000424830 RGPD5Q99666 1765 aa23.18■■□□□ 1.3
PUDP-203ENST00000424830 PTF1AQ7RTS3 328 aa23.18■■□□□ 1.3
PUDP-203ENST00000424830 ARHGEF25Q86VW2 580 aa23.18■■□□□ 1.3
PUDP-203ENST00000424830 SOX12O15370 315 aa23.17■■□□□ 1.3
PUDP-203ENST00000424830 CARD10Q9BWT7 1032 aa23.17■■□□□ 1.3
PUDP-203ENST00000424830 TTC21BQ7Z4L5 1316 aa23.17■■□□□ 1.3
PUDP-203ENST00000424830 TTC21AQ8NDW8 1320 aa23.16■■□□□ 1.3
PUDP-203ENST00000424830 L3MBTL2Q969R5 705 aa23.14■■□□□ 1.3
PUDP-203ENST00000424830 STK32BQ9NY57 414 aa23.14■■□□□ 1.3
PUDP-203ENST00000424830 ABCC6O95255 1503 aa23.14■■□□□ 1.29
PUDP-203ENST00000424830 CCDC7Q96M83 1385 aa23.14■■□□□ 1.29
PUDP-203ENST00000424830 EXOC5O00471 708 aa23.13■■□□□ 1.29
PUDP-203ENST00000424830 ZBTB7AO95365 584 aa23.13■■□□□ 1.29
PUDP-203ENST00000424830 PROM2Q8N271 834 aa23.13■■□□□ 1.29
PUDP-203ENST00000424830 NFAT5O94916 1531 aa23.13■■□□□ 1.29
PUDP-203ENST00000424830 ROCK2O75116 1388 aaKnown RBP23.13■■□□□ 1.29
PUDP-203ENST00000424830 MYOM1P52179 1685 aa23.12■■□□□ 1.29
PUDP-203ENST00000424830 TXNRD1Q16881 649 aa23.11■■□□□ 1.29
PUDP-203ENST00000424830 PDGFDQ9GZP0 370 aaPredicted RBP23.11■■□□□ 1.29
PUDP-203ENST00000424830 KTN1Q86UP2 1357 aaKnown RBP23.11■■□□□ 1.29
PUDP-203ENST00000424830 TNS2Q63HR2 1409 aa23.11■■□□□ 1.29
PUDP-203ENST00000424830 UTRNP46939 3433 aa23.09■■□□□ 1.29
PUDP-203ENST00000424830 SLC15A2Q16348 729 aa23.08■■□□□ 1.29
PUDP-203ENST00000424830 MON2Q7Z3U7 1717 aa23.08■■□□□ 1.29
PUDP-203ENST00000424830 PTGER2P43116 358 aa23.08■■□□□ 1.28
PUDP-203ENST00000424830 ATF5Q9Y2D1 282 aaPredicted RBP23.08■■□□□ 1.28
PUDP-203ENST00000424830 NHSQ6T4R5 1651 aa23.07■■□□□ 1.28
PUDP-203ENST00000424830 MTFR1LQ9H019 292 aa23.05■■□□□ 1.28
PUDP-203ENST00000424830 USP54Q70EL1 1684 aa23.03■■□□□ 1.28
PUDP-203ENST00000424830 ERBB3P21860 1342 aa23.03■■□□□ 1.28
PUDP-203ENST00000424830 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.03■■□□□ 1.28
PUDP-203ENST00000424830 NLRP2Q9NX02 1062 aa23.03■■□□□ 1.28
PUDP-203ENST00000424830 LTN1O94822 1766 aa23.02■■□□□ 1.28
PUDP-203ENST00000424830 USP31Q70CQ4 1352 aa23.02■■□□□ 1.28
PUDP-203ENST00000424830 FHDC1Q9C0D6 1143 aaPredicted RBP23.02■■□□□ 1.28
PUDP-203ENST00000424830 IL2RBP14784 551 aa23.01■■□□□ 1.27
PUDP-203ENST00000424830 ACSBG1Q96GR2 724 aa23.01■■□□□ 1.27
PUDP-203ENST00000424830 SIN3AQ96ST3 1273 aa23.01■■□□□ 1.27
PUDP-203ENST00000424830 SBNO2Q9Y2G9 1366 aa23■■□□□ 1.27
PUDP-203ENST00000424830 SYT17Q9BSW7 474 aa23■■□□□ 1.27
PUDP-203ENST00000424830 KAT6BQ8WYB5 2073 aa22.99■■□□□ 1.27
PUDP-203ENST00000424830 NEUROD1Q13562 356 aa22.99■■□□□ 1.27
PUDP-203ENST00000424830 BTAF1O14981 1849 aa22.98■■□□□ 1.27
PUDP-203ENST00000424830 PAPPAQ13219 1627 aa22.98■■□□□ 1.27
PUDP-203ENST00000424830 NME9Q86XW9 330 aa22.97■■□□□ 1.27
PUDP-203ENST00000424830 HDGFL2Q7Z4V5 671 aaPredicted RBP22.96■■□□□ 1.27
PUDP-203ENST00000424830 ZNF784Q8NCA9 323 aaPredicted RBP22.96■■□□□ 1.27
PUDP-203ENST00000424830 TMC1Q8TDI8 760 aa22.96■■□□□ 1.27
PUDP-203ENST00000424830 SGIP1Q9BQI5 828 aa22.96■■□□□ 1.27
PUDP-203ENST00000424830 CHD4Q14839 1912 aa22.96■■□□□ 1.27
PUDP-203ENST00000424830 ANKRD24Q8TF21 1146 aa22.95■■□□□ 1.26
PUDP-203ENST00000424830 ARXQ96QS3 562 aa22.95■■□□□ 1.26
PUDP-203ENST00000424830 CD163L1Q9NR16 1453 aa22.95■■□□□ 1.26
PUDP-203ENST00000424830 EDC4Q6P2E9 1401 aaKnown RBP22.93■■□□□ 1.26
PUDP-203ENST00000424830 MAP3K5Q99683 1374 aa22.91■■□□□ 1.26
PUDP-203ENST00000424830 CARD11Q9BXL7 1154 aa22.91■■□□□ 1.26
PUDP-203ENST00000424830 ZNF827Q17R98 1081 aa22.9■■□□□ 1.26
PUDP-203ENST00000424830 TERF2IPQ9NYB0 399 aa22.9■■□□□ 1.26
PUDP-203ENST00000424830 FAM208AQ9UK61 1670 aaKnown RBP22.9■■□□□ 1.26
PUDP-203ENST00000424830 SLC12A5Q9H2X9 1139 aa22.88■■□□□ 1.25
PUDP-203ENST00000424830 QSER1Q2KHR3 1735 aa22.87■■□□□ 1.25
PUDP-203ENST00000424830 SLC27A3Q5K4L6 730 aa22.87■■□□□ 1.25
PUDP-203ENST00000424830 LRRC4BQ9NT99 713 aa22.87■■□□□ 1.25
PUDP-203ENST00000424830 A0A1W2PP64 1363 aa22.87■■□□□ 1.25
PUDP-203ENST00000424830 DDX54Q8TDD1 881 aaKnown RBP22.85■■□□□ 1.25
PUDP-203ENST00000424830 SLC16A10Q8TF71 515 aa22.85■■□□□ 1.25
PUDP-203ENST00000424830 POLD1P28340 1107 aa22.84■■□□□ 1.25
PUDP-203ENST00000424830 IP6K1Q92551 441 aa22.84■■□□□ 1.25
PUDP-203ENST00000424830 AKT1S1Q96B36 256 aa22.84■■□□□ 1.25
PUDP-203ENST00000424830 GOLGB1Q14789 3259 aaKnown RBP22.84■■□□□ 1.25
PUDP-203ENST00000424830 GPR162Q16538 588 aa22.83■■□□□ 1.25
PUDP-203ENST00000424830 KLHL34Q8N239 644 aa22.83■■□□□ 1.25
PUDP-203ENST00000424830 LTV1Q96GA3 475 aaPredicted RBP22.83■■□□□ 1.25
PUDP-203ENST00000424830 SYTL4Q96C24 671 aaPredicted RBP22.82■■□□□ 1.24
PUDP-203ENST00000424830 PUS7Q96PZ0 661 aaKnown RBP22.82■■□□□ 1.24
PUDP-203ENST00000424830 DOT1LQ8TEK3 1739 aa22.81■■□□□ 1.24
PUDP-203ENST00000424830 TFCP2L1Q9NZI6 479 aa22.81■■□□□ 1.24
PUDP-203ENST00000424830 ANKRD36BQ8N2N9 1353 aa22.8■■□□□ 1.24
PUDP-203ENST00000424830 PNPLA7Q6ZV29 1317 aa22.8■■□□□ 1.24
PUDP-203ENST00000424830 COL24A1Q17RW2 1714 aa22.8■■□□□ 1.24
PUDP-203ENST00000424830 TUBGCP6Q96RT7 1819 aa22.79■■□□□ 1.24
PUDP-203ENST00000424830 SENP3-EIF4A1A0A087X0R7 540 aa22.79■■□□□ 1.24
PUDP-203ENST00000424830 COG3Q96JB2 828 aa22.79■■□□□ 1.24
PUDP-203ENST00000424830 C1QTNF8P60827 252 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms