RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 TRIM5Q9C035 493 aa16.59■□□□□ 0.25
SREBF2-202ENST00000424354 CWC22Q9HCG8 908 aaKnown RBP16.59■□□□□ 0.25
SREBF2-202ENST00000424354 ATF3P18847 181 aa16.59■□□□□ 0.25
SREBF2-202ENST00000424354 EIF2S2P20042 333 aaKnown RBP16.58■□□□□ 0.25
SREBF2-202ENST00000424354 AMOTL1Q8IY63 956 aa16.58■□□□□ 0.24
SREBF2-202ENST00000424354 PDZRN3Q9UPQ7 1066 aa16.58■□□□□ 0.24
SREBF2-202ENST00000424354 ZMYM3Q14202 1370 aa16.58■□□□□ 0.24
SREBF2-202ENST00000424354 ADAMTS8Q9UP79 889 aa16.58■□□□□ 0.24
SREBF2-202ENST00000424354 PDCP20941 246 aa16.57■□□□□ 0.24
SREBF2-202ENST00000424354 GCC1Q96CN9 775 aa16.57■□□□□ 0.24
SREBF2-202ENST00000424354 ARHGEF40Q8TER5 1519 aa16.57■□□□□ 0.24
SREBF2-202ENST00000424354 PLXNC1O60486 1568 aa16.57■□□□□ 0.24
SREBF2-202ENST00000424354 ZMYM4Q5VZL5 1548 aa16.57■□□□□ 0.24
SREBF2-202ENST00000424354 PRPF40AO75400 957 aaKnown RBP16.57■□□□□ 0.24
SREBF2-202ENST00000424354 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
SREBF2-202ENST00000424354 NFXL1Q6ZNB6 911 aa16.56■□□□□ 0.24
SREBF2-202ENST00000424354 SDF4Q9BRK5 362 aa16.56■□□□□ 0.24
SREBF2-202ENST00000424354 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
SREBF2-202ENST00000424354 GRPEL1Q9HAV7 217 aa16.56■□□□□ 0.24
SREBF2-202ENST00000424354 MINK1Q8N4C8 1332 aaPredicted RBP16.56■□□□□ 0.24
SREBF2-202ENST00000424354 ERICH2A1L162 156 aa16.56■□□□□ 0.24
SREBF2-202ENST00000424354 APPP05067 770 aa16.56■□□□□ 0.24
SREBF2-202ENST00000424354 CALRP27797 417 aaKnown RBP16.56■□□□□ 0.24
SREBF2-202ENST00000424354 CNTROBQ8N137 903 aa16.56■□□□□ 0.24
SREBF2-202ENST00000424354 ANO8Q9HCE9 1232 aaPredicted RBP16.56■□□□□ 0.24
SREBF2-202ENST00000424354 AGLP35573 1532 aa16.56■□□□□ 0.24
SREBF2-202ENST00000424354 RRP9O43818 475 aaKnown RBP16.56■□□□□ 0.24
SREBF2-202ENST00000424354 FBXW7Q969H0 707 aa16.55■□□□□ 0.24
SREBF2-202ENST00000424354 PRM3Q9NNZ6 103 aa16.55■□□□□ 0.24
SREBF2-202ENST00000424354 EIF2AK4Q9P2K8 1649 aaKnown RBP16.55■□□□□ 0.24
SREBF2-202ENST00000424354 RRP12Q5JTH9 1297 aaKnown RBP16.54■□□□□ 0.24
SREBF2-202ENST00000424354 TSPYL4Q9UJ04 414 aa16.54■□□□□ 0.24
SREBF2-202ENST00000424354 NLRP1Q9C000 1473 aa16.54■□□□□ 0.24
SREBF2-202ENST00000424354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
SREBF2-202ENST00000424354 DCTN1Q14203 1278 aa16.54■□□□□ 0.24
SREBF2-202ENST00000424354 CDCA7LQ96GN5 454 aa16.54■□□□□ 0.24
SREBF2-202ENST00000424354 KINO60870 393 aaKnown RBP16.53■□□□□ 0.24
SREBF2-202ENST00000424354 RALYLQ86SE5 291 aaKnown RBP16.53■□□□□ 0.24
SREBF2-202ENST00000424354 CIZ1Q9ULV3 898 aaPredicted RBP16.53■□□□□ 0.24
SREBF2-202ENST00000424354 NPATQ14207 1427 aa16.53■□□□□ 0.24
SREBF2-202ENST00000424354 NOL10Q9BSC4 688 aaKnown RBP16.53■□□□□ 0.24
SREBF2-202ENST00000424354 NEK4P51957 841 aa16.53■□□□□ 0.24
SREBF2-202ENST00000424354 PHF23Q9BUL5 403 aaPredicted RBP16.53■□□□□ 0.24
SREBF2-202ENST00000424354 PDILTQ8N807 584 aa16.52■□□□□ 0.24
SREBF2-202ENST00000424354 UBTFL1P0CB47 393 aaPredicted RBP16.52■□□□□ 0.24
SREBF2-202ENST00000424354 H0YHG0 523 aa16.52■□□□□ 0.24
SREBF2-202ENST00000424354 CDC42BPAQ5VT25 1732 aa16.52■□□□□ 0.24
SREBF2-202ENST00000424354 GNAI3P08754 354 aa16.52■□□□□ 0.23
SREBF2-202ENST00000424354 NAP1L1P55209 391 aaKnown RBP16.52■□□□□ 0.23
SREBF2-202ENST00000424354 RBM10P98175 930 aaKnown RBP16.52■□□□□ 0.23
SREBF2-202ENST00000424354 LEKR1Q6ZMV7 388 aa16.52■□□□□ 0.23
SREBF2-202ENST00000424354 K7ELQ4 463 aaPredicted RBP16.51■□□□□ 0.23
SREBF2-202ENST00000424354 PSME1Q06323 249 aa16.51■□□□□ 0.23
SREBF2-202ENST00000424354 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
SREBF2-202ENST00000424354 PTPRKQ15262 1439 aa16.51■□□□□ 0.23
SREBF2-202ENST00000424354 HIP1O00291 1037 aa16.51■□□□□ 0.23
SREBF2-202ENST00000424354 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
SREBF2-202ENST00000424354 NECTIN2Q92692 538 aa16.5■□□□□ 0.23
SREBF2-202ENST00000424354 CCDC192P0DO97 292 aa16.5■□□□□ 0.23
SREBF2-202ENST00000424354 PPP2R1AP30153 589 aa16.5■□□□□ 0.23
SREBF2-202ENST00000424354 RDXP35241 583 aaKnown RBP16.5■□□□□ 0.23
SREBF2-202ENST00000424354 NBPF1Q3BBV0 1214 aa16.5■□□□□ 0.23
SREBF2-202ENST00000424354 PROSER2Q86WR7 435 aaPredicted RBP16.5■□□□□ 0.23
SREBF2-202ENST00000424354 MBD5Q9P267 1494 aa16.5■□□□□ 0.23
SREBF2-202ENST00000424354 SMC2O95347 1197 aa16.5■□□□□ 0.23
SREBF2-202ENST00000424354 SMARCE1Q969G3 411 aa16.5■□□□□ 0.23
SREBF2-202ENST00000424354 BRMS1Q9HCU9 246 aa16.5■□□□□ 0.23
SREBF2-202ENST00000424354 ESPNB1AK53 854 aa16.49■□□□□ 0.23
SREBF2-202ENST00000424354 CCDC191Q8NCU4 936 aa16.49■□□□□ 0.23
SREBF2-202ENST00000424354 SYTL4Q96C24 671 aaPredicted RBP16.49■□□□□ 0.23
SREBF2-202ENST00000424354 CT47B1P0C2W7 299 aaPredicted RBP16.49■□□□□ 0.23
SREBF2-202ENST00000424354 FOSBP53539 338 aa16.49■□□□□ 0.23
SREBF2-202ENST00000424354 ZNF396Q96N95 335 aaPredicted RBP16.49■□□□□ 0.23
SREBF2-202ENST00000424354 CCDC27Q2M243 656 aa16.49■□□□□ 0.23
SREBF2-202ENST00000424354 AEBP1Q8IUX7 1158 aa16.49■□□□□ 0.23
SREBF2-202ENST00000424354 WDR33Q9C0J8 1336 aaKnown RBP16.48■□□□□ 0.23
SREBF2-202ENST00000424354 XBP1P17861 261 aa16.48■□□□□ 0.23
SREBF2-202ENST00000424354 CCDC112Q8NEF3 446 aa16.48■□□□□ 0.23
SREBF2-202ENST00000424354 MYO6Q9UM54 1294 aa16.48■□□□□ 0.23
SREBF2-202ENST00000424354 UQCRHLA0A096LP55 91 aa16.48■□□□□ 0.23
SREBF2-202ENST00000424354 UQCRHP07919 91 aa16.48■□□□□ 0.23
SREBF2-202ENST00000424354 MCM4P33991 863 aa16.48■□□□□ 0.23
SREBF2-202ENST00000424354 FILIP1LQ4L180 1135 aa16.48■□□□□ 0.23
SREBF2-202ENST00000424354 CLASRPQ8N2M8 674 aaKnown RBP16.48■□□□□ 0.23
SREBF2-202ENST00000424354 KLHL34Q8N239 644 aa16.46■□□□□ 0.23
SREBF2-202ENST00000424354 YEATS2Q9ULM3 1422 aa16.46■□□□□ 0.23
SREBF2-202ENST00000424354 FIBPO43427 364 aa16.46■□□□□ 0.23
SREBF2-202ENST00000424354 FSD1Q9BTV5 496 aa16.46■□□□□ 0.23
SREBF2-202ENST00000424354 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.23
SREBF2-202ENST00000424354 TCEAL9Q9UHQ7 104 aa16.46■□□□□ 0.23
SREBF2-202ENST00000424354 HMOX1P09601 288 aa16.45■□□□□ 0.22
SREBF2-202ENST00000424354 MTHFSP49914 203 aa16.45■□□□□ 0.22
SREBF2-202ENST00000424354 DHX16O60231 1041 aaKnown RBP16.45■□□□□ 0.22
SREBF2-202ENST00000424354 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
SREBF2-202ENST00000424354 PNISRQ8TF01 805 aaKnown RBP16.44■□□□□ 0.22
SREBF2-202ENST00000424354 KDM5CP41229 1560 aa16.44■□□□□ 0.22
SREBF2-202ENST00000424354 LRPPRCP42704 1394 aaKnown RBP16.44■□□□□ 0.22
SREBF2-202ENST00000424354 OFD1O75665 1012 aa16.44■□□□□ 0.22
SREBF2-202ENST00000424354 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
SREBF2-202ENST00000424354 SPC24Q8NBT2 197 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms