RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 NRAPQ86VF7 1730 aa16.06■□□□□ 0.16
LMO3-206ENST00000424192 PANK3Q9H999 370 aa16.06■□□□□ 0.16
LMO3-206ENST00000424192 AATKQ6ZMQ8 1374 aa16.05■□□□□ 0.16
LMO3-206ENST00000424192 CARD14Q9BXL6 1004 aa16.05■□□□□ 0.16
LMO3-206ENST00000424192 USP21Q9UK80 565 aa16.05■□□□□ 0.16
LMO3-206ENST00000424192 KNSTRNQ9Y448 316 aa16.05■□□□□ 0.16
LMO3-206ENST00000424192 BCL9LQ86UU0 1499 aa16.04■□□□□ 0.16
LMO3-206ENST00000424192 ATRNO75882 1429 aa16.04■□□□□ 0.16
LMO3-206ENST00000424192 RTL1A6NKG5 1358 aa16.04■□□□□ 0.16
LMO3-206ENST00000424192 FYB1O15117 783 aa16.04■□□□□ 0.16
LMO3-206ENST00000424192 TRPC5Q9UL62 973 aaPredicted RBP16.04■□□□□ 0.16
LMO3-206ENST00000424192 ZC3H6P61129 1189 aaKnown RBP16.03■□□□□ 0.16
LMO3-206ENST00000424192 UNC5CLQ8IV45 518 aa16.03■□□□□ 0.16
LMO3-206ENST00000424192 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
LMO3-206ENST00000424192 KIF24Q5T7B8 1368 aa16.02■□□□□ 0.16
LMO3-206ENST00000424192 FAM83GA6ND36 823 aa16.02■□□□□ 0.16
LMO3-206ENST00000424192 LTN1O94822 1766 aa16.02■□□□□ 0.15
LMO3-206ENST00000424192 BLMP54132 1417 aaPredicted RBP16.02■□□□□ 0.15
LMO3-206ENST00000424192 NPC1L1Q9UHC9 1359 aa16.01■□□□□ 0.15
LMO3-206ENST00000424192 ARHGEF25Q86VW2 580 aa16.01■□□□□ 0.15
LMO3-206ENST00000424192 GGNBP2Q9H3C7 697 aa16.01■□□□□ 0.15
LMO3-206ENST00000424192 BTG4Q9NY30 223 aa16.01■□□□□ 0.15
LMO3-206ENST00000424192 RGS17Q9UGC6 210 aaPredicted RBP16.01■□□□□ 0.15
LMO3-206ENST00000424192 COL5A2P05997 1499 aaPredicted RBP16■□□□□ 0.15
LMO3-206ENST00000424192 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
LMO3-206ENST00000424192 CAMTA1Q9Y6Y1 1673 aa15.99■□□□□ 0.15
LMO3-206ENST00000424192 SOX12O15370 315 aa15.99■□□□□ 0.15
LMO3-206ENST00000424192 VPS72Q15906 364 aa15.99■□□□□ 0.15
LMO3-206ENST00000424192 COL18A1P39060 1754 aa15.99■□□□□ 0.15
LMO3-206ENST00000424192 FAM208AQ9UK61 1670 aaKnown RBP15.99■□□□□ 0.15
LMO3-206ENST00000424192 RBM6P78332 1123 aaKnown RBP15.98■□□□□ 0.15
LMO3-206ENST00000424192 CHRNA2Q15822 529 aa15.98■□□□□ 0.15
LMO3-206ENST00000424192 QTRT2Q9H974 415 aaKnown RBP15.98■□□□□ 0.15
LMO3-206ENST00000424192 ZBTB7CA1YPR0 619 aa15.97■□□□□ 0.15
LMO3-206ENST00000424192 RXRBP28702 533 aa15.97■□□□□ 0.15
LMO3-206ENST00000424192 CRB1P82279 1406 aa15.96■□□□□ 0.15
LMO3-206ENST00000424192 SMG6Q86US8 1419 aaKnown RBP15.96■□□□□ 0.15
LMO3-206ENST00000424192 POTEAQ6S8J7 498 aa15.96■□□□□ 0.15
LMO3-206ENST00000424192 FLT4P35916 1363 aa15.96■□□□□ 0.15
LMO3-206ENST00000424192 EVA1CP58658 441 aa15.95■□□□□ 0.14
LMO3-206ENST00000424192 AMER1Q5JTC6 1135 aaPredicted RBP15.95■□□□□ 0.14
LMO3-206ENST00000424192 GLI3P10071 1580 aa15.95■□□□□ 0.14
LMO3-206ENST00000424192 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
LMO3-206ENST00000424192 PER1O15534 1290 aaPredicted RBP15.94■□□□□ 0.14
LMO3-206ENST00000424192 AMPHP49418 695 aa15.94■□□□□ 0.14
LMO3-206ENST00000424192 MORC1Q86VD1 984 aa15.94■□□□□ 0.14
LMO3-206ENST00000424192 GJD4Q96KN9 370 aaPredicted RBP15.94■□□□□ 0.14
LMO3-206ENST00000424192 CCDC9Q9Y3X0 531 aaKnown RBP15.94■□□□□ 0.14
LMO3-206ENST00000424192 ERBB3P21860 1342 aa15.94■□□□□ 0.14
LMO3-206ENST00000424192 WDR17Q8IZU2 1322 aa15.94■□□□□ 0.14
LMO3-206ENST00000424192 IP6K1Q92551 441 aa15.93■□□□□ 0.14
LMO3-206ENST00000424192 STRN4Q9NRL3 753 aa15.93■□□□□ 0.14
LMO3-206ENST00000424192 SPATA31A5Q5VU36 1347 aa15.93■□□□□ 0.14
LMO3-206ENST00000424192 SPATA31A7Q8IWB4 1347 aa15.93■□□□□ 0.14
LMO3-206ENST00000424192 THRAP3Q9Y2W1 955 aaKnown RBP15.92■□□□□ 0.14
LMO3-206ENST00000424192 RGS12O14924 1447 aa15.92■□□□□ 0.14
LMO3-206ENST00000424192 INSRP06213 1382 aa15.91■□□□□ 0.14
LMO3-206ENST00000424192 HOXC9P31274 260 aa15.91■□□□□ 0.14
LMO3-206ENST00000424192 SPATA31A1Q5TZJ5 1347 aa15.91■□□□□ 0.14
LMO3-206ENST00000424192 THSD7AQ9UPZ6 1657 aa15.9■□□□□ 0.14
LMO3-206ENST00000424192 CSB-PGBD3P0DP91 1061 aa15.9■□□□□ 0.14
LMO3-206ENST00000424192 RRS1Q15050 365 aaKnown RBP15.9■□□□□ 0.14
LMO3-206ENST00000424192 PEAK1Q9H792 1746 aa15.9■□□□□ 0.14
LMO3-206ENST00000424192 RGPD5Q99666 1765 aa15.9■□□□□ 0.14
LMO3-206ENST00000424192 TOM1L2Q6ZVM7 507 aa15.89■□□□□ 0.13
LMO3-206ENST00000424192 WNK3Q9BYP7 1800 aa15.89■□□□□ 0.13
LMO3-206ENST00000424192 ZNF316A6NFI3 1004 aaPredicted RBP15.88■□□□□ 0.13
LMO3-206ENST00000424192 LARP1Q6PKG0 1096 aaKnown RBP15.88■□□□□ 0.13
LMO3-206ENST00000424192 BARGINQ6ZT62 677 aa15.88■□□□□ 0.13
LMO3-206ENST00000424192 TCP11L2Q8N4U5 519 aa15.88■□□□□ 0.13
LMO3-206ENST00000424192 ANKRD24Q8TF21 1146 aa15.88■□□□□ 0.13
LMO3-206ENST00000424192 AXIN2Q9Y2T1 843 aa15.88■□□□□ 0.13
LMO3-206ENST00000424192 MAP2P11137 1827 aaKnown RBP15.87■□□□□ 0.13
LMO3-206ENST00000424192 CDCA7Q9BWT1 371 aaPredicted RBP15.87■□□□□ 0.13
LMO3-206ENST00000424192 CARD10Q9BWT7 1032 aa15.87■□□□□ 0.13
LMO3-206ENST00000424192 PARP4Q9UKK3 1724 aaKnown RBP15.86■□□□□ 0.13
LMO3-206ENST00000424192 CC2D1BQ5T0F9 858 aaKnown RBP15.86■□□□□ 0.13
LMO3-206ENST00000424192 POLKQ9UBT6 870 aa15.86■□□□□ 0.13
LMO3-206ENST00000424192 EMILIN1Q9Y6C2 1016 aa15.86■□□□□ 0.13
LMO3-206ENST00000424192 ONECUT3O60422 494 aaPredicted RBP15.85■□□□□ 0.13
LMO3-206ENST00000424192 TNNT2P45379 298 aaPredicted RBP15.85■□□□□ 0.13
LMO3-206ENST00000424192 A0A0G2JS52 829 aa15.84■□□□□ 0.13
LMO3-206ENST00000424192 PPM1GO15355 546 aaPredicted RBP15.84■□□□□ 0.13
LMO3-206ENST00000424192 MYT1Q01538 1121 aa15.84■□□□□ 0.13
LMO3-206ENST00000424192 FAM98CQ17RN3 349 aaKnown RBP15.84■□□□□ 0.13
LMO3-206ENST00000424192 NLRP2Q9NX02 1062 aa15.84■□□□□ 0.13
LMO3-206ENST00000424192 DDX10Q13206 875 aaKnown RBP15.83■□□□□ 0.12
LMO3-206ENST00000424192 PARD3Q8TEW0 1356 aa15.83■□□□□ 0.12
LMO3-206ENST00000424192 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.12
LMO3-206ENST00000424192 DISP2A7MBM2 1401 aa15.83■□□□□ 0.12
LMO3-206ENST00000424192 LRRC37A3O60309 1634 aa15.83■□□□□ 0.12
LMO3-206ENST00000424192 FBLN1P23142 703 aa15.82■□□□□ 0.12
LMO3-206ENST00000424192 SEPT12Q8IYM1 358 aa15.82■□□□□ 0.12
LMO3-206ENST00000424192 USP35Q9P2H5 1018 aa15.82■□□□□ 0.12
LMO3-206ENST00000424192 FKBP8Q14318 412 aa15.81■□□□□ 0.12
LMO3-206ENST00000424192 NCAPD2Q15021 1401 aa15.81■□□□□ 0.12
LMO3-206ENST00000424192 HSP90AB2PQ58FF8 381 aa15.81■□□□□ 0.12
LMO3-206ENST00000424192 TNS2Q63HR2 1409 aa15.81■□□□□ 0.12
LMO3-206ENST00000424192 ILDR2Q71H61 639 aa15.81■□□□□ 0.12
LMO3-206ENST00000424192 RALBP1Q15311 655 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms