RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
PLOD3-204ENST00000424135 WDR17Q8IZU2 1322 aa16.9■□□□□ 0.3
PLOD3-204ENST00000424135 TRPM1Q7Z4N2 1603 aa16.89■□□□□ 0.29
PLOD3-204ENST00000424135 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
PLOD3-204ENST00000424135 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
PLOD3-204ENST00000424135 SBF2Q86WG5 1849 aa16.88■□□□□ 0.29
PLOD3-204ENST00000424135 KCNQ2O43526 872 aa16.87■□□□□ 0.29
PLOD3-204ENST00000424135 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
PLOD3-204ENST00000424135 PLSCR1O15162 318 aa16.86■□□□□ 0.29
PLOD3-204ENST00000424135 BCL11BQ9C0K0 894 aaPredicted RBP16.86■□□□□ 0.29
PLOD3-204ENST00000424135 SPON1Q9HCB6 807 aa16.86■□□□□ 0.29
PLOD3-204ENST00000424135 ROCK2O75116 1388 aaKnown RBP16.86■□□□□ 0.29
PLOD3-204ENST00000424135 NFAT5O94916 1531 aa16.86■□□□□ 0.29
PLOD3-204ENST00000424135 CARD10Q9BWT7 1032 aa16.85■□□□□ 0.29
PLOD3-204ENST00000424135 AKAP12Q02952 1782 aa16.84■□□□□ 0.29
PLOD3-204ENST00000424135 WNK3Q9BYP7 1800 aa16.84■□□□□ 0.29
PLOD3-204ENST00000424135 CSB-PGBD3P0DP91 1061 aa16.84■□□□□ 0.29
PLOD3-204ENST00000424135 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
PLOD3-204ENST00000424135 PPP1R1BQ9UD71 204 aaPredicted RBP16.83■□□□□ 0.28
PLOD3-204ENST00000424135 CASZ1Q86V15 1759 aa16.82■□□□□ 0.28
PLOD3-204ENST00000424135 KTN1Q86UP2 1357 aaKnown RBP16.82■□□□□ 0.28
PLOD3-204ENST00000424135 C11orf95C9JLR9 678 aaPredicted RBP16.82■□□□□ 0.28
PLOD3-204ENST00000424135 ZBTB7AO95365 584 aa16.82■□□□□ 0.28
PLOD3-204ENST00000424135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.82■□□□□ 0.28
PLOD3-204ENST00000424135 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
PLOD3-204ENST00000424135 BCL9O00512 1426 aa16.81■□□□□ 0.28
PLOD3-204ENST00000424135 TTC21AQ8NDW8 1320 aa16.81■□□□□ 0.28
PLOD3-204ENST00000424135 YY1P25490 414 aa16.81■□□□□ 0.28
PLOD3-204ENST00000424135 NME9Q86XW9 330 aa16.81■□□□□ 0.28
PLOD3-204ENST00000424135 RGPD3A6NKT7 1758 aaPredicted RBP16.81■□□□□ 0.28
PLOD3-204ENST00000424135 RGPD4Q7Z3J3 1758 aa16.81■□□□□ 0.28
PLOD3-204ENST00000424135 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
PLOD3-204ENST00000424135 UTRNP46939 3433 aa16.8■□□□□ 0.28
PLOD3-204ENST00000424135 CDCA7Q9BWT1 371 aaPredicted RBP16.8■□□□□ 0.28
PLOD3-204ENST00000424135 EXOC5O00471 708 aa16.79■□□□□ 0.28
PLOD3-204ENST00000424135 PTGER2P43116 358 aa16.79■□□□□ 0.28
PLOD3-204ENST00000424135 TXNRD1Q16881 649 aa16.79■□□□□ 0.28
PLOD3-204ENST00000424135 ATF5Q9Y2D1 282 aaPredicted RBP16.79■□□□□ 0.28
PLOD3-204ENST00000424135 SBNO2Q9Y2G9 1366 aa16.78■□□□□ 0.28
PLOD3-204ENST00000424135 ACSBG1Q96GR2 724 aa16.78■□□□□ 0.28
PLOD3-204ENST00000424135 NINLQ9Y2I6 1382 aa16.77■□□□□ 0.28
PLOD3-204ENST00000424135 MON2Q7Z3U7 1717 aa16.77■□□□□ 0.28
PLOD3-204ENST00000424135 SLC12A5Q9H2X9 1139 aa16.77■□□□□ 0.28
PLOD3-204ENST00000424135 TNS2Q63HR2 1409 aa16.77■□□□□ 0.27
PLOD3-204ENST00000424135 USP31Q70CQ4 1352 aa16.77■□□□□ 0.27
PLOD3-204ENST00000424135 CCDC7Q96M83 1385 aa16.77■□□□□ 0.27
PLOD3-204ENST00000424135 MYOM1P52179 1685 aa16.75■□□□□ 0.27
PLOD3-204ENST00000424135 ERBB3P21860 1342 aa16.75■□□□□ 0.27
PLOD3-204ENST00000424135 SLC15A2Q16348 729 aa16.75■□□□□ 0.27
PLOD3-204ENST00000424135 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
PLOD3-204ENST00000424135 NLRP2Q9NX02 1062 aa16.75■□□□□ 0.27
PLOD3-204ENST00000424135 STK32BQ9NY57 414 aa16.74■□□□□ 0.27
PLOD3-204ENST00000424135 ANKRD24Q8TF21 1146 aa16.73■□□□□ 0.27
PLOD3-204ENST00000424135 CARD11Q9BXL7 1154 aa16.73■□□□□ 0.27
PLOD3-204ENST00000424135 ABCC6O95255 1503 aa16.72■□□□□ 0.27
PLOD3-204ENST00000424135 FBLN1P23142 703 aa16.71■□□□□ 0.27
PLOD3-204ENST00000424135 SGIP1Q9BQI5 828 aa16.71■□□□□ 0.27
PLOD3-204ENST00000424135 NHSQ6T4R5 1651 aa16.71■□□□□ 0.27
PLOD3-204ENST00000424135 USP54Q70EL1 1684 aa16.71■□□□□ 0.27
PLOD3-204ENST00000424135 A0A1W2PP64 1363 aa16.7■□□□□ 0.26
PLOD3-204ENST00000424135 IL2RBP14784 551 aa16.7■□□□□ 0.26
PLOD3-204ENST00000424135 ZNF827Q17R98 1081 aa16.7■□□□□ 0.26
PLOD3-204ENST00000424135 FHDC1Q9C0D6 1143 aaPredicted RBP16.7■□□□□ 0.26
PLOD3-204ENST00000424135 LRRC4BQ9NT99 713 aa16.7■□□□□ 0.26
PLOD3-204ENST00000424135 LTN1O94822 1766 aa16.69■□□□□ 0.26
PLOD3-204ENST00000424135 PAPPAQ13219 1627 aa16.68■□□□□ 0.26
PLOD3-204ENST00000424135 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
PLOD3-204ENST00000424135 LTV1Q96GA3 475 aaPredicted RBP16.68■□□□□ 0.26
PLOD3-204ENST00000424135 SYT17Q9BSW7 474 aa16.68■□□□□ 0.26
PLOD3-204ENST00000424135 EDC4Q6P2E9 1401 aaKnown RBP16.68■□□□□ 0.26
PLOD3-204ENST00000424135 MTFR1LQ9H019 292 aa16.67■□□□□ 0.26
PLOD3-204ENST00000424135 BTAF1O14981 1849 aa16.66■□□□□ 0.26
PLOD3-204ENST00000424135 KCNQ4P56696 695 aa16.66■□□□□ 0.26
PLOD3-204ENST00000424135 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
PLOD3-204ENST00000424135 DDX54Q8TDD1 881 aaKnown RBP16.65■□□□□ 0.26
PLOD3-204ENST00000424135 IP6K1Q92551 441 aa16.65■□□□□ 0.26
PLOD3-204ENST00000424135 TESK2Q96S53 571 aa16.65■□□□□ 0.26
PLOD3-204ENST00000424135 TERF2IPQ9NYB0 399 aa16.63■□□□□ 0.25
PLOD3-204ENST00000424135 ZNF784Q8NCA9 323 aaPredicted RBP16.62■□□□□ 0.25
PLOD3-204ENST00000424135 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
PLOD3-204ENST00000424135 ARXQ96QS3 562 aa16.62■□□□□ 0.25
PLOD3-204ENST00000424135 MAP3K19Q56UN5 1328 aa16.62■□□□□ 0.25
PLOD3-204ENST00000424135 GOLGB1Q14789 3259 aaKnown RBP16.62■□□□□ 0.25
PLOD3-204ENST00000424135 ST20-MTHFSA0A0A6YYL1 179 aa16.61■□□□□ 0.25
PLOD3-204ENST00000424135 KAT6BQ8WYB5 2073 aa16.6■□□□□ 0.25
PLOD3-204ENST00000424135 HOXC9P31274 260 aa16.6■□□□□ 0.25
PLOD3-204ENST00000424135 PRIM1P49642 420 aaKnown RBP16.6■□□□□ 0.25
PLOD3-204ENST00000424135 NSD2O96028 1365 aa16.6■□□□□ 0.25
PLOD3-204ENST00000424135 TONSLQ96HA7 1378 aa16.6■□□□□ 0.25
PLOD3-204ENST00000424135 PUS7Q96PZ0 661 aaKnown RBP16.59■□□□□ 0.25
PLOD3-204ENST00000424135 FAM208AQ9UK61 1670 aaKnown RBP16.59■□□□□ 0.25
PLOD3-204ENST00000424135 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
PLOD3-204ENST00000424135 PNPLA7Q6ZV29 1317 aa16.58■□□□□ 0.24
PLOD3-204ENST00000424135 MEGF6O75095 1541 aa16.58■□□□□ 0.24
PLOD3-204ENST00000424135 RGPD2P0DJD1 1756 aa16.58■□□□□ 0.24
PLOD3-204ENST00000424135 RRS1Q15050 365 aaKnown RBP16.57■□□□□ 0.24
PLOD3-204ENST00000424135 USHBP1Q8N6Y0 703 aa16.57■□□□□ 0.24
PLOD3-204ENST00000424135 COG3Q96JB2 828 aa16.57■□□□□ 0.24
PLOD3-204ENST00000424135 SHANK3Q9BYB0 1731 aa16.56■□□□□ 0.24
PLOD3-204ENST00000424135 ANKRD36BQ8N2N9 1353 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms