RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 CABP2Q9NPB3 220 aa13.15□□□□□ -0.3
TNC-203ENST00000423613 PPP4R3BQ5MIZ7 849 aa13.15□□□□□ -0.3
TNC-203ENST00000423613 MNAT1P51948 309 aa13.15□□□□□ -0.3
TNC-203ENST00000423613 ADAMTS8Q9UP79 889 aa13.14□□□□□ -0.31
TNC-203ENST00000423613 LRRFIP2Q9Y608 721 aaKnown RBP13.14□□□□□ -0.31
TNC-203ENST00000423613 UBTFL1P0CB47 393 aaPredicted RBP13.14□□□□□ -0.31
TNC-203ENST00000423613 SERPINC1P01008 464 aa13.14□□□□□ -0.31
TNC-203ENST00000423613 AAMPQ13685 434 aa13.14□□□□□ -0.31
TNC-203ENST00000423613 FILIP1LQ4L180 1135 aa13.14□□□□□ -0.31
TNC-203ENST00000423613 GBP2P32456 591 aaPredicted RBP13.13□□□□□ -0.31
TNC-203ENST00000423613 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
TNC-203ENST00000423613 MPHOSPH10O00566 681 aaKnown RBP13.12□□□□□ -0.31
TNC-203ENST00000423613 DNAAF4Q8WXU2 420 aa13.12□□□□□ -0.31
TNC-203ENST00000423613 MAGEC2Q9UBF1 373 aaPredicted RBP13.12□□□□□ -0.31
TNC-203ENST00000423613 BRD4O60885 1362 aaPredicted RBP13.12□□□□□ -0.31
TNC-203ENST00000423613 SPATA24Q86W54 205 aa13.12□□□□□ -0.31
TNC-203ENST00000423613 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
TNC-203ENST00000423613 NINLQ9Y2I6 1382 aa13.12□□□□□ -0.31
TNC-203ENST00000423613 MIA2Q96PC5 1412 aa13.12□□□□□ -0.31
TNC-203ENST00000423613 CDK5RAP3Q96JB5 506 aa13.12□□□□□ -0.31
TNC-203ENST00000423613 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
TNC-203ENST00000423613 PDIA4P13667 645 aaKnown RBP13.11□□□□□ -0.31
TNC-203ENST00000423613 TMEM132EQ6IEE7 984 aa13.11□□□□□ -0.31
TNC-203ENST00000423613 CUX1P39880 1505 aa13.11□□□□□ -0.31
TNC-203ENST00000423613 XBP1P17861 261 aa13.11□□□□□ -0.31
TNC-203ENST00000423613 MICALCLQ6ZW33 695 aa13.11□□□□□ -0.31
TNC-203ENST00000423613 KRT18P05783 430 aaKnown RBP13.11□□□□□ -0.31
TNC-203ENST00000423613 SLC3A2P08195 630 aaKnown RBP13.11□□□□□ -0.31
TNC-203ENST00000423613 TDO2P48775 406 aa13.11□□□□□ -0.31
TNC-203ENST00000423613 MTHFSP49914 203 aa13.11□□□□□ -0.31
TNC-203ENST00000423613 NLRP6P59044 892 aa13.11□□□□□ -0.31
TNC-203ENST00000423613 CCDC113Q9H0I3 377 aa13.11□□□□□ -0.31
TNC-203ENST00000423613 CNTROBQ8N137 903 aa13.1□□□□□ -0.31
TNC-203ENST00000423613 DDX54Q8TDD1 881 aaKnown RBP13.1□□□□□ -0.31
TNC-203ENST00000423613 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.1□□□□□ -0.31
TNC-203ENST00000423613 MBD3O95983 291 aa13.1□□□□□ -0.31
TNC-203ENST00000423613 CEBPZQ03701 1054 aaKnown RBP13.1□□□□□ -0.31
TNC-203ENST00000423613 FSD1Q9BTV5 496 aa13.1□□□□□ -0.31
TNC-203ENST00000423613 GPRASP1Q5JY77 1395 aa13.1□□□□□ -0.31
TNC-203ENST00000423613 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
TNC-203ENST00000423613 CHMP4BP1P59074 171 aa13.1□□□□□ -0.31
TNC-203ENST00000423613 TCP11L2Q8N4U5 519 aa13.1□□□□□ -0.31
TNC-203ENST00000423613 ABTB2Q8N961 1025 aa13.1□□□□□ -0.31
TNC-203ENST00000423613 KINO60870 393 aaKnown RBP13.1□□□□□ -0.31
TNC-203ENST00000423613 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
TNC-203ENST00000423613 UBXN4Q92575 508 aa13.1□□□□□ -0.31
TNC-203ENST00000423613 CNNM1Q9NRU3 951 aa13.1□□□□□ -0.31
TNC-203ENST00000423613 PSMA5P28066 241 aa13.09□□□□□ -0.31
TNC-203ENST00000423613 PPFIBP1Q86W92 1011 aa13.09□□□□□ -0.31
TNC-203ENST00000423613 CCDC97Q96F63 343 aaPredicted RBP13.09□□□□□ -0.31
TNC-203ENST00000423613 CRACR2AQ9BSW2 395 aa13.09□□□□□ -0.31
TNC-203ENST00000423613 FIBPO43427 364 aa13.08□□□□□ -0.32
TNC-203ENST00000423613 ZSCAN29Q8IWY8 852 aaPredicted RBP13.08□□□□□ -0.32
TNC-203ENST00000423613 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.32
TNC-203ENST00000423613 ANKRD50Q9ULJ7 1429 aa13.08□□□□□ -0.32
TNC-203ENST00000423613 STAC3Q96MF2 364 aa13.08□□□□□ -0.32
TNC-203ENST00000423613 ZNHIT6Q9NWK9 470 aaKnown RBP13.08□□□□□ -0.32
TNC-203ENST00000423613 IQCEQ6IPM2 695 aa13.08□□□□□ -0.32
TNC-203ENST00000423613 TOM1L2Q6ZVM7 507 aa13.08□□□□□ -0.32
TNC-203ENST00000423613 SYCP1Q15431 976 aa13.08□□□□□ -0.32
TNC-203ENST00000423613 SURF6O75683 361 aaKnown RBP13.08□□□□□ -0.32
TNC-203ENST00000423613 PPP2R1AP30153 589 aa13.08□□□□□ -0.32
TNC-203ENST00000423613 C1orf115Q9H7X2 142 aa13.08□□□□□ -0.32
TNC-203ENST00000423613 FAM107BQ9H098 131 aa13.07□□□□□ -0.32
TNC-203ENST00000423613 IGF1RP08069 1367 aa13.07□□□□□ -0.32
TNC-203ENST00000423613 ATP2B1P20020 1258 aa13.07□□□□□ -0.32
TNC-203ENST00000423613 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
TNC-203ENST00000423613 SART3Q15020 963 aaKnown RBP13.07□□□□□ -0.32
TNC-203ENST00000423613 CCDC192P0DO97 292 aa13.07□□□□□ -0.32
TNC-203ENST00000423613 XPCQ01831 940 aaPredicted RBP13.07□□□□□ -0.32
TNC-203ENST00000423613 TTC39AQ5SRH9 613 aa13.07□□□□□ -0.32
TNC-203ENST00000423613 CCDC91Q7Z6B0 441 aa13.07□□□□□ -0.32
TNC-203ENST00000423613 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
TNC-203ENST00000423613 LMAN1P49257 510 aa13.07□□□□□ -0.32
TNC-203ENST00000423613 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
TNC-203ENST00000423613 BICDL1Q6ZP65 573 aa13.06□□□□□ -0.32
TNC-203ENST00000423613 FGD5Q6ZNL6 1462 aa13.06□□□□□ -0.32
TNC-203ENST00000423613 NEK4P51957 841 aa13.06□□□□□ -0.32
TNC-203ENST00000423613 GNL3LQ9NVN8 582 aaKnown RBP13.06□□□□□ -0.32
TNC-203ENST00000423613 SERPINA10Q9UK55 444 aa13.06□□□□□ -0.32
TNC-203ENST00000423613 GNAI3P08754 354 aa13.06□□□□□ -0.32
TNC-203ENST00000423613 CCDC30Q5VVM6 783 aa13.06□□□□□ -0.32
TNC-203ENST00000423613 ZSCAN30Q86W11 494 aa13.06□□□□□ -0.32
TNC-203ENST00000423613 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
TNC-203ENST00000423613 LRRC9Q6ZRR7 1453 aa13.06□□□□□ -0.32
TNC-203ENST00000423613 TNMDQ9H2S6 317 aa13.05□□□□□ -0.32
TNC-203ENST00000423613 CCDC160A6NGH7 325 aa13.05□□□□□ -0.32
TNC-203ENST00000423613 UBE4AQ14139 1066 aa13.05□□□□□ -0.32
TNC-203ENST00000423613 PRKAR2BP31323 418 aa13.05□□□□□ -0.32
TNC-203ENST00000423613 DAAM2Q86T65 1068 aa13.05□□□□□ -0.32
TNC-203ENST00000423613 TMX1Q9H3N1 280 aa13.05□□□□□ -0.32
TNC-203ENST00000423613 TTLL12Q14166 644 aaPredicted RBP13.04□□□□□ -0.32
TNC-203ENST00000423613 ZHX3Q9H4I2 956 aa13.04□□□□□ -0.32
TNC-203ENST00000423613 PRDM2Q13029 1718 aa13.04□□□□□ -0.32
TNC-203ENST00000423613 RAD54L2Q9Y4B4 1467 aa13.04□□□□□ -0.32
TNC-203ENST00000423613 ATP2C2O75185 946 aa13.04□□□□□ -0.32
TNC-203ENST00000423613 CABP4P57796 275 aa13.04□□□□□ -0.32
TNC-203ENST00000423613 TMEM87AQ8NBN3 555 aa13.04□□□□□ -0.32
TNC-203ENST00000423613 KIF21BO75037 1637 aa13.04□□□□□ -0.32
TNC-203ENST00000423613 CASQ1P31415 396 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms