RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 AATKQ6ZMQ8 1374 aa13.34□□□□□ -0.27
HERC3-204ENST00000422770 ANKRD26Q9UPS8 1709 aa13.34□□□□□ -0.27
HERC3-204ENST00000422770 SEPT12Q8IYM1 358 aa13.34□□□□□ -0.27
HERC3-204ENST00000422770 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
HERC3-204ENST00000422770 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
HERC3-204ENST00000422770 WNK3Q9BYP7 1800 aa13.34□□□□□ -0.27
HERC3-204ENST00000422770 LARP1Q6PKG0 1096 aaKnown RBP13.33□□□□□ -0.28
HERC3-204ENST00000422770 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
HERC3-204ENST00000422770 ARHGEF25Q86VW2 580 aa13.32□□□□□ -0.28
HERC3-204ENST00000422770 CGNL1Q0VF96 1302 aa13.32□□□□□ -0.28
HERC3-204ENST00000422770 C11orf95C9JLR9 678 aaPredicted RBP13.31□□□□□ -0.28
HERC3-204ENST00000422770 UPF1Q92900 1129 aaKnown RBP eCLIP13.31□□□□□ -0.28
HERC3-204ENST00000422770 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
HERC3-204ENST00000422770 SPATA31A1Q5TZJ5 1347 aa13.31□□□□□ -0.28
HERC3-204ENST00000422770 THSD7AQ9UPZ6 1657 aa13.31□□□□□ -0.28
HERC3-204ENST00000422770 CRB1P82279 1406 aa13.3□□□□□ -0.28
HERC3-204ENST00000422770 MAP2P11137 1827 aaKnown RBP13.3□□□□□ -0.28
HERC3-204ENST00000422770 ABCC6O95255 1503 aa13.3□□□□□ -0.28
HERC3-204ENST00000422770 FYB1O15117 783 aa13.3□□□□□ -0.28
HERC3-204ENST00000422770 FBLN1P23142 703 aa13.3□□□□□ -0.28
HERC3-204ENST00000422770 AMPHP49418 695 aa13.3□□□□□ -0.28
HERC3-204ENST00000422770 LTV1Q96GA3 475 aaPredicted RBP13.3□□□□□ -0.28
HERC3-204ENST00000422770 CARD14Q9BXL6 1004 aa13.3□□□□□ -0.28
HERC3-204ENST00000422770 PANK3Q9H999 370 aa13.3□□□□□ -0.28
HERC3-204ENST00000422770 AXIN2Q9Y2T1 843 aa13.3□□□□□ -0.28
HERC3-204ENST00000422770 RGPD2P0DJD1 1756 aa13.3□□□□□ -0.28
HERC3-204ENST00000422770 FAM208AQ9UK61 1670 aaKnown RBP13.29□□□□□ -0.28
HERC3-204ENST00000422770 KRT27Q7Z3Y8 459 aa13.29□□□□□ -0.28
HERC3-204ENST00000422770 TCP11L2Q8N4U5 519 aa13.29□□□□□ -0.28
HERC3-204ENST00000422770 RRS1Q15050 365 aaKnown RBP13.28□□□□□ -0.28
HERC3-204ENST00000422770 WDR17Q8IZU2 1322 aa13.28□□□□□ -0.28
HERC3-204ENST00000422770 PARP4Q9UKK3 1724 aaKnown RBP13.27□□□□□ -0.28
HERC3-204ENST00000422770 PPM1GO15355 546 aaPredicted RBP13.27□□□□□ -0.29
HERC3-204ENST00000422770 TNNT2P45379 298 aaPredicted RBP13.27□□□□□ -0.29
HERC3-204ENST00000422770 CNGB1Q14028 1251 aaPredicted RBP13.27□□□□□ -0.29
HERC3-204ENST00000422770 NLRP2Q9NX02 1062 aa13.27□□□□□ -0.29
HERC3-204ENST00000422770 MAP3K19Q56UN5 1328 aa13.27□□□□□ -0.29
HERC3-204ENST00000422770 LRRC37A3O60309 1634 aa13.26□□□□□ -0.29
HERC3-204ENST00000422770 FAM182BQ5T319 152 aa13.26□□□□□ -0.29
HERC3-204ENST00000422770 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
HERC3-204ENST00000422770 PEAK1Q9H792 1746 aa13.26□□□□□ -0.29
HERC3-204ENST00000422770 KNSTRNQ9Y448 316 aa13.26□□□□□ -0.29
HERC3-204ENST00000422770 BLMP54132 1417 aaPredicted RBP13.25□□□□□ -0.29
HERC3-204ENST00000422770 CCDC7Q96M83 1385 aa13.25□□□□□ -0.29
HERC3-204ENST00000422770 PDE3BQ13370 1112 aa13.25□□□□□ -0.29
HERC3-204ENST00000422770 SMG6Q86US8 1419 aaKnown RBP13.24□□□□□ -0.29
HERC3-204ENST00000422770 ERBB3P21860 1342 aa13.24□□□□□ -0.29
HERC3-204ENST00000422770 HOXC9P31274 260 aa13.24□□□□□ -0.29
HERC3-204ENST00000422770 BARGINQ6ZT62 677 aa13.24□□□□□ -0.29
HERC3-204ENST00000422770 IP6K1Q92551 441 aa13.24□□□□□ -0.29
HERC3-204ENST00000422770 THRAP3Q9Y2W1 955 aaKnown RBP13.24□□□□□ -0.29
HERC3-204ENST00000422770 RGPD1P0DJD0 1748 aa13.24□□□□□ -0.29
HERC3-204ENST00000422770 RTL1A6NKG5 1358 aa13.23□□□□□ -0.29
HERC3-204ENST00000422770 WASHC2AQ641Q2 1341 aa13.23□□□□□ -0.29
HERC3-204ENST00000422770 ONECUT3O60422 494 aaPredicted RBP13.23□□□□□ -0.29
HERC3-204ENST00000422770 SF3B2Q13435 895 aaKnown RBP13.23□□□□□ -0.29
HERC3-204ENST00000422770 CARD10Q9BWT7 1032 aa13.22□□□□□ -0.29
HERC3-204ENST00000422770 EMILIN1Q9Y6C2 1016 aa13.22□□□□□ -0.29
HERC3-204ENST00000422770 NSD2O96028 1365 aa13.21□□□□□ -0.29
HERC3-204ENST00000422770 FLT4P35916 1363 aa13.21□□□□□ -0.29
HERC3-204ENST00000422770 DDB1Q16531 1140 aa13.21□□□□□ -0.29
HERC3-204ENST00000422770 MORC1Q86VD1 984 aa13.21□□□□□ -0.29
HERC3-204ENST00000422770 KAT6BQ8WYB5 2073 aa13.2□□□□□ -0.3
HERC3-204ENST00000422770 ZNF316A6NFI3 1004 aaPredicted RBP13.2□□□□□ -0.3
HERC3-204ENST00000422770 CC2D1BQ5T0F9 858 aaKnown RBP13.2□□□□□ -0.3
HERC3-204ENST00000422770 CDCA7Q9BWT1 371 aaPredicted RBP13.19□□□□□ -0.3
HERC3-204ENST00000422770 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
HERC3-204ENST00000422770 SBF2Q86WG5 1849 aa13.18□□□□□ -0.3
HERC3-204ENST00000422770 HSP90AB2PQ58FF8 381 aa13.18□□□□□ -0.3
HERC3-204ENST00000422770 USHBP1Q8N6Y0 703 aa13.18□□□□□ -0.3
HERC3-204ENST00000422770 EXOC5O00471 708 aa13.17□□□□□ -0.3
HERC3-204ENST00000422770 IL2RBP14784 551 aa13.17□□□□□ -0.3
HERC3-204ENST00000422770 FAM196AQ6ZSG2 479 aa13.17□□□□□ -0.3
HERC3-204ENST00000422770 INSRP06213 1382 aa13.17□□□□□ -0.3
HERC3-204ENST00000422770 OVOS2A0A0G2JMS6 1433 aa13.16□□□□□ -0.3
HERC3-204ENST00000422770 DISP2A7MBM2 1401 aa13.16□□□□□ -0.3
HERC3-204ENST00000422770 TNS2Q63HR2 1409 aa13.16□□□□□ -0.3
HERC3-204ENST00000422770 TRIM37O94972 964 aa13.16□□□□□ -0.3
HERC3-204ENST00000422770 CCDC125Q86Z20 511 aa13.16□□□□□ -0.3
HERC3-204ENST00000422770 KIF24Q5T7B8 1368 aa13.16□□□□□ -0.3
HERC3-204ENST00000422770 BAG6P46379 1132 aa13.15□□□□□ -0.3
HERC3-204ENST00000422770 POLKQ9UBT6 870 aa13.15□□□□□ -0.3
HERC3-204ENST00000422770 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
HERC3-204ENST00000422770 DEFB132Q7Z7B7 95 aa13.14□□□□□ -0.31
HERC3-204ENST00000422770 RAPGEF4Q8WZA2 1011 aa13.14□□□□□ -0.31
HERC3-204ENST00000422770 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
HERC3-204ENST00000422770 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
HERC3-204ENST00000422770 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
HERC3-204ENST00000422770 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
HERC3-204ENST00000422770 MEGF6O75095 1541 aa13.13□□□□□ -0.31
HERC3-204ENST00000422770 EP400Q96L91 3159 aa13.12□□□□□ -0.31
HERC3-204ENST00000422770 MARCH10Q8NA82 808 aaPredicted RBP13.12□□□□□ -0.31
HERC3-204ENST00000422770 DOT1LQ8TEK3 1739 aa13.12□□□□□ -0.31
HERC3-204ENST00000422770 APBA3O96018 575 aa13.11□□□□□ -0.31
HERC3-204ENST00000422770 TATP17735 454 aaPredicted RBP13.11□□□□□ -0.31
HERC3-204ENST00000422770 NHSQ6T4R5 1651 aa13.1□□□□□ -0.31
HERC3-204ENST00000422770 PER1O15534 1290 aaPredicted RBP13.1□□□□□ -0.31
HERC3-204ENST00000422770 EN1Q05925 392 aaPredicted RBP13.1□□□□□ -0.31
HERC3-204ENST00000422770 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
HERC3-204ENST00000422770 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms