RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 CCER1Q8TC90 406 aaPredicted RBP12.08□□□□□ -0.48
MDC1-204ENST00000422266 BRWD3Q6RI45 1802 aa12.08□□□□□ -0.48
MDC1-204ENST00000422266 THSD7AQ9UPZ6 1657 aa12.07□□□□□ -0.48
MDC1-204ENST00000422266 MON2Q7Z3U7 1717 aa12.07□□□□□ -0.48
MDC1-204ENST00000422266 WDR17Q8IZU2 1322 aa12.07□□□□□ -0.48
MDC1-204ENST00000422266 A0A1W2PP64 1363 aa12.06□□□□□ -0.48
MDC1-204ENST00000422266 CSB-PGBD3P0DP91 1061 aa12.06□□□□□ -0.48
MDC1-204ENST00000422266 ANKRD36BQ8N2N9 1353 aa12.05□□□□□ -0.48
MDC1-204ENST00000422266 COG3Q96JB2 828 aa12.05□□□□□ -0.48
MDC1-204ENST00000422266 CARD10Q9BWT7 1032 aa12.05□□□□□ -0.48
MDC1-204ENST00000422266 CD163L1Q9NR16 1453 aa12.05□□□□□ -0.48
MDC1-204ENST00000422266 CCDC7Q96M83 1385 aa12.05□□□□□ -0.48
MDC1-204ENST00000422266 SOX12O15370 315 aa12.04□□□□□ -0.48
MDC1-204ENST00000422266 DDB1Q16531 1140 aa12.04□□□□□ -0.48
MDC1-204ENST00000422266 NME9Q86XW9 330 aa12.04□□□□□ -0.48
MDC1-204ENST00000422266 AXIN2Q9Y2T1 843 aa12.03□□□□□ -0.48
MDC1-204ENST00000422266 USP54Q70EL1 1684 aa12.03□□□□□ -0.48
MDC1-204ENST00000422266 PARD3Q8TEW0 1356 aa12.03□□□□□ -0.48
MDC1-204ENST00000422266 DISP2A7MBM2 1401 aa12.03□□□□□ -0.48
MDC1-204ENST00000422266 NFAT5O94916 1531 aa12.02□□□□□ -0.48
MDC1-204ENST00000422266 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.49
MDC1-204ENST00000422266 RGPD1P0DJD0 1748 aa12.02□□□□□ -0.49
MDC1-204ENST00000422266 EIF4G2P78344 907 aaKnown RBP eCLIP12.01□□□□□ -0.49
MDC1-204ENST00000422266 OVOS2A0A0G2JMS6 1433 aa12.01□□□□□ -0.49
MDC1-204ENST00000422266 OVOS2A0A0J9YW53 1432 aa12.01□□□□□ -0.49
MDC1-204ENST00000422266 OVOS2Q6IE36 1432 aa12.01□□□□□ -0.49
MDC1-204ENST00000422266 COL18A1P39060 1754 aa12□□□□□ -0.49
MDC1-204ENST00000422266 EXOC5O00471 708 aa12□□□□□ -0.49
MDC1-204ENST00000422266 TRIM37O94972 964 aa12□□□□□ -0.49
MDC1-204ENST00000422266 ERBB3P21860 1342 aa12□□□□□ -0.49
MDC1-204ENST00000422266 PARP4Q9UKK3 1724 aaKnown RBP12□□□□□ -0.49
MDC1-204ENST00000422266 APBA3O96018 575 aa11.99□□□□□ -0.49
MDC1-204ENST00000422266 FAM182BQ5T319 152 aa11.99□□□□□ -0.49
MDC1-204ENST00000422266 IP6K1Q92551 441 aa11.99□□□□□ -0.49
MDC1-204ENST00000422266 BCL9O00512 1426 aa11.98□□□□□ -0.49
MDC1-204ENST00000422266 AMPHP49418 695 aa11.98□□□□□ -0.49
MDC1-204ENST00000422266 EN1Q05925 392 aaPredicted RBP11.98□□□□□ -0.49
MDC1-204ENST00000422266 ANKRD24Q8TF21 1146 aa11.98□□□□□ -0.49
MDC1-204ENST00000422266 NLRP2Q9NX02 1062 aa11.98□□□□□ -0.49
MDC1-204ENST00000422266 RTL1A6NKG5 1358 aa11.97□□□□□ -0.49
MDC1-204ENST00000422266 KIF24Q5T7B8 1368 aa11.96□□□□□ -0.49
MDC1-204ENST00000422266 FYB1O15117 783 aa11.96□□□□□ -0.49
MDC1-204ENST00000422266 IL2RBP14784 551 aa11.96□□□□□ -0.49
MDC1-204ENST00000422266 NBPF14Q5TI25 921 aa11.96□□□□□ -0.49
MDC1-204ENST00000422266 SMG6Q86US8 1419 aaKnown RBP11.95□□□□□ -0.5
MDC1-204ENST00000422266 CGNL1Q0VF96 1302 aa11.95□□□□□ -0.5
MDC1-204ENST00000422266 PLSCR1O15162 318 aa11.95□□□□□ -0.5
MDC1-204ENST00000422266 CAMKK2Q96RR4 588 aa11.95□□□□□ -0.5
MDC1-204ENST00000422266 BCL11BQ9C0K0 894 aaPredicted RBP11.95□□□□□ -0.5
MDC1-204ENST00000422266 TNS2Q63HR2 1409 aa11.94□□□□□ -0.5
MDC1-204ENST00000422266 MAP3K19Q56UN5 1328 aa11.94□□□□□ -0.5
MDC1-204ENST00000422266 HOXC9P31274 260 aa11.94□□□□□ -0.5
MDC1-204ENST00000422266 LTN1O94822 1766 aa11.94□□□□□ -0.5
MDC1-204ENST00000422266 EZH2Q15910 746 aaKnown RBP11.93□□□□□ -0.5
MDC1-204ENST00000422266 GGNBP2Q9H3C7 697 aa11.93□□□□□ -0.5
MDC1-204ENST00000422266 FAM208AQ9UK61 1670 aaKnown RBP11.93□□□□□ -0.5
MDC1-204ENST00000422266 LRRC37A3O60309 1634 aa11.93□□□□□ -0.5
MDC1-204ENST00000422266 RGPD5Q99666 1765 aa11.92□□□□□ -0.5
MDC1-204ENST00000422266 TNS1Q9HBL0 1735 aaKnown RBP11.92□□□□□ -0.5
MDC1-204ENST00000422266 MARCH10Q8NA82 808 aaPredicted RBP11.92□□□□□ -0.5
MDC1-204ENST00000422266 WNK3Q9BYP7 1800 aa11.91□□□□□ -0.5
MDC1-204ENST00000422266 HSPA5P11021 654 aaKnown RBP11.91□□□□□ -0.5
MDC1-204ENST00000422266 HMGB2P26583 209 aaKnown RBP11.91□□□□□ -0.5
MDC1-204ENST00000422266 NSD3Q9BZ95 1437 aa11.91□□□□□ -0.5
MDC1-204ENST00000422266 FLT4P35916 1363 aa11.91□□□□□ -0.5
MDC1-204ENST00000422266 LTV1Q96GA3 475 aaPredicted RBP11.9□□□□□ -0.5
MDC1-204ENST00000422266 POLR3GLQ9BT43 218 aa11.9□□□□□ -0.5
MDC1-204ENST00000422266 INSRP06213 1382 aa11.9□□□□□ -0.5
MDC1-204ENST00000422266 PEAK1Q9H792 1746 aa11.89□□□□□ -0.51
MDC1-204ENST00000422266 RRS1Q15050 365 aaKnown RBP11.89□□□□□ -0.51
MDC1-204ENST00000422266 RAPGEF4Q8WZA2 1011 aa11.89□□□□□ -0.51
MDC1-204ENST00000422266 CARD14Q9BXL6 1004 aa11.89□□□□□ -0.51
MDC1-204ENST00000422266 RGPD3A6NKT7 1758 aaPredicted RBP11.88□□□□□ -0.51
MDC1-204ENST00000422266 RGPD4Q7Z3J3 1758 aa11.88□□□□□ -0.51
MDC1-204ENST00000422266 R3HDM1Q15032 1099 aaKnown RBP11.88□□□□□ -0.51
MDC1-204ENST00000422266 NSD2O96028 1365 aa11.88□□□□□ -0.51
MDC1-204ENST00000422266 KIF20BQ96Q89 1820 aa11.88□□□□□ -0.51
MDC1-204ENST00000422266 ZCRB1Q8TBF4 217 aaKnown RBP11.87□□□□□ -0.51
MDC1-204ENST00000422266 PSDA5PKW4 1024 aaPredicted RBP11.86□□□□□ -0.51
MDC1-204ENST00000422266 TATP17735 454 aaPredicted RBP11.86□□□□□ -0.51
MDC1-204ENST00000422266 MYOM1P52179 1685 aa11.86□□□□□ -0.51
MDC1-204ENST00000422266 SBF2Q86WG5 1849 aa11.86□□□□□ -0.51
MDC1-204ENST00000422266 WASHC2AQ641Q2 1341 aa11.86□□□□□ -0.51
MDC1-204ENST00000422266 DDX54Q8TDD1 881 aaKnown RBP11.85□□□□□ -0.51
MDC1-204ENST00000422266 PANK3Q9H999 370 aa11.85□□□□□ -0.51
MDC1-204ENST00000422266 KNSTRNQ9Y448 316 aa11.85□□□□□ -0.51
MDC1-204ENST00000422266 LRP5O75197 1615 aa11.85□□□□□ -0.51
MDC1-204ENST00000422266 RREB1Q92766 1687 aa11.84□□□□□ -0.51
MDC1-204ENST00000422266 SRCAPQ6ZRS2 3230 aa11.84□□□□□ -0.51
MDC1-204ENST00000422266 PPM1GO15355 546 aaPredicted RBP11.84□□□□□ -0.51
MDC1-204ENST00000422266 FBLN1P23142 703 aa11.84□□□□□ -0.51
MDC1-204ENST00000422266 TXNRD1Q16881 649 aa11.84□□□□□ -0.51
MDC1-204ENST00000422266 HSP90AB2PQ58FF8 381 aa11.84□□□□□ -0.51
MDC1-204ENST00000422266 NBPF6Q5VWK0 638 aa11.84□□□□□ -0.51
MDC1-204ENST00000422266 NBPF4Q96M43 638 aa11.84□□□□□ -0.51
MDC1-204ENST00000422266 PLEKHG2Q9H7P9 1386 aa11.83□□□□□ -0.52
MDC1-204ENST00000422266 ACSBG1Q96GR2 724 aa11.83□□□□□ -0.52
MDC1-204ENST00000422266 STK32BQ9NY57 414 aa11.83□□□□□ -0.52
MDC1-204ENST00000422266 PCDH11XQ9BZA7 1347 aa11.83□□□□□ -0.52
MDC1-204ENST00000422266 PCDH11YQ9BZA8 1340 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms