RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 WDR78Q5VTH9 848 aa16.02■□□□□ 0.16
COL20A1-203ENST00000422202 BMP2KQ9NSY1 1161 aaPredicted RBP16.02■□□□□ 0.15
COL20A1-203ENST00000422202 DACH1Q9UI36 760 aa16.02■□□□□ 0.15
COL20A1-203ENST00000422202 BICDL1Q6ZP65 573 aa16.02■□□□□ 0.15
COL20A1-203ENST00000422202 COMMD10Q9Y6G5 202 aa16.02■□□□□ 0.15
COL20A1-203ENST00000422202 TSPY26PQ9H489 355 aa16.01■□□□□ 0.15
COL20A1-203ENST00000422202 TDRD9Q8NDG6 1382 aaKnown RBP16.01■□□□□ 0.15
COL20A1-203ENST00000422202 CCDC57Q2TAC2 916 aa16.01■□□□□ 0.15
COL20A1-203ENST00000422202 ME1P48163 572 aa16.01■□□□□ 0.15
COL20A1-203ENST00000422202 PPP4R3AQ6IN85 833 aa16.01■□□□□ 0.15
COL20A1-203ENST00000422202 TTC16Q8NEE8 873 aa16.01■□□□□ 0.15
COL20A1-203ENST00000422202 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
COL20A1-203ENST00000422202 TDO2P48775 406 aa16.01■□□□□ 0.15
COL20A1-203ENST00000422202 JAKMIP3Q5VZ66 844 aa16.01■□□□□ 0.15
COL20A1-203ENST00000422202 KIAA1328Q86T90 577 aa16.01■□□□□ 0.15
COL20A1-203ENST00000422202 INCENPQ9NQS7 918 aa16.01■□□□□ 0.15
COL20A1-203ENST00000422202 DYDC1Q8WWB3 177 aa16■□□□□ 0.15
COL20A1-203ENST00000422202 JMYQ8N9B5 988 aa16■□□□□ 0.15
COL20A1-203ENST00000422202 CDC45O75419 566 aa16■□□□□ 0.15
COL20A1-203ENST00000422202 CABP2Q9NPB3 220 aa16■□□□□ 0.15
COL20A1-203ENST00000422202 FIBPO43427 364 aa15.99■□□□□ 0.15
COL20A1-203ENST00000422202 STAMBPO95630 424 aa15.99■□□□□ 0.15
COL20A1-203ENST00000422202 TNIP1Q15025 636 aa15.99■□□□□ 0.15
COL20A1-203ENST00000422202 PLEKHO1Q53GL0 409 aaPredicted RBP15.99■□□□□ 0.15
COL20A1-203ENST00000422202 PROSER2Q86WR7 435 aaPredicted RBP15.99■□□□□ 0.15
COL20A1-203ENST00000422202 PDCP20941 246 aa15.99■□□□□ 0.15
COL20A1-203ENST00000422202 C16orf71Q8IYS4 520 aaPredicted RBP15.99■□□□□ 0.15
COL20A1-203ENST00000422202 HOMER2Q9NSB8 354 aa15.99■□□□□ 0.15
COL20A1-203ENST00000422202 TSHZ2Q9NRE2 1034 aa15.99■□□□□ 0.15
COL20A1-203ENST00000422202 TATP17735 454 aaPredicted RBP15.99■□□□□ 0.15
COL20A1-203ENST00000422202 NOL7Q9UMY1 257 aaKnown RBP15.98■□□□□ 0.15
COL20A1-203ENST00000422202 USP47Q96K76 1375 aa15.98■□□□□ 0.15
COL20A1-203ENST00000422202 CCDC113Q9H0I3 377 aa15.98■□□□□ 0.15
COL20A1-203ENST00000422202 CEP63Q96MT8 703 aa15.98■□□□□ 0.15
COL20A1-203ENST00000422202 PANK1Q8TE04 598 aa15.98■□□□□ 0.15
COL20A1-203ENST00000422202 CCDC150Q8NCX0 1101 aa15.97■□□□□ 0.15
COL20A1-203ENST00000422202 CEP57L1Q8IYX8 460 aa15.97■□□□□ 0.15
COL20A1-203ENST00000422202 PUS7Q96PZ0 661 aaKnown RBP15.97■□□□□ 0.15
COL20A1-203ENST00000422202 TMOD2Q9NZR1 351 aa15.97■□□□□ 0.15
COL20A1-203ENST00000422202 MAP2K1Q02750 393 aaPredicted RBP15.97■□□□□ 0.15
COL20A1-203ENST00000422202 DHX57Q6P158 1386 aaKnown RBP15.97■□□□□ 0.15
COL20A1-203ENST00000422202 NEK4P51957 841 aa15.97■□□□□ 0.15
COL20A1-203ENST00000422202 LRRCC1Q9C099 1032 aa15.97■□□□□ 0.15
COL20A1-203ENST00000422202 C1orf115Q9H7X2 142 aa15.97■□□□□ 0.15
COL20A1-203ENST00000422202 CCDC66A2RUB6 948 aa15.96■□□□□ 0.15
COL20A1-203ENST00000422202 IQCEQ6IPM2 695 aa15.96■□□□□ 0.15
COL20A1-203ENST00000422202 TNMDQ9H2S6 317 aa15.96■□□□□ 0.15
COL20A1-203ENST00000422202 LRP2BPQ9P2M1 347 aa15.96■□□□□ 0.15
COL20A1-203ENST00000422202 GOPCQ9HD26 462 aa15.96■□□□□ 0.15
COL20A1-203ENST00000422202 PRPF40AO75400 957 aaKnown RBP15.96■□□□□ 0.14
COL20A1-203ENST00000422202 ZNF397Q8NF99 534 aaPredicted RBP15.96■□□□□ 0.14
COL20A1-203ENST00000422202 GGNBP2Q9H3C7 697 aa15.96■□□□□ 0.14
COL20A1-203ENST00000422202 SLC26A8Q96RN1 970 aa15.95■□□□□ 0.14
COL20A1-203ENST00000422202 UBAC1Q9BSL1 405 aa15.95■□□□□ 0.14
COL20A1-203ENST00000422202 SEC63Q9UGP8 760 aaKnown RBP15.95■□□□□ 0.14
COL20A1-203ENST00000422202 RAI14Q9P0K7 980 aa15.95■□□□□ 0.14
COL20A1-203ENST00000422202 VPS8Q8N3P4 1428 aa15.95■□□□□ 0.14
COL20A1-203ENST00000422202 GNAI2P04899 355 aa15.95■□□□□ 0.14
COL20A1-203ENST00000422202 ZSCAN25Q6NSZ9 544 aa15.95■□□□□ 0.14
COL20A1-203ENST00000422202 DDX23Q9BUQ8 820 aaKnown RBP15.95■□□□□ 0.14
COL20A1-203ENST00000422202 FHOD3Q2V2M9 1422 aa15.94■□□□□ 0.14
COL20A1-203ENST00000422202 EPB41L2O43491 1005 aaKnown RBP15.94■□□□□ 0.14
COL20A1-203ENST00000422202 PPP1R12BO60237 982 aaPredicted RBP15.94■□□□□ 0.14
COL20A1-203ENST00000422202 JPH4Q96JJ6 628 aa15.94■□□□□ 0.14
COL20A1-203ENST00000422202 CETN2P41208 172 aa15.94■□□□□ 0.14
COL20A1-203ENST00000422202 CTNNBL1Q8WYA6 563 aaPredicted RBP15.94■□□□□ 0.14
COL20A1-203ENST00000422202 GAS2L2Q8NHY3 880 aa15.93■□□□□ 0.14
COL20A1-203ENST00000422202 MTHFSP49914 203 aa15.93■□□□□ 0.14
COL20A1-203ENST00000422202 EIF5P55010 431 aaKnown RBP15.93■□□□□ 0.14
COL20A1-203ENST00000422202 FERMT2Q96AC1 680 aa15.93■□□□□ 0.14
COL20A1-203ENST00000422202 CRACR2BQ8N4Y2 399 aaPredicted RBP15.93■□□□□ 0.14
COL20A1-203ENST00000422202 MRPS9P82933 396 aaKnown RBP15.93■□□□□ 0.14
COL20A1-203ENST00000422202 CFAP45Q9UL16 551 aa15.93■□□□□ 0.14
COL20A1-203ENST00000422202 LIG1P18858 919 aa15.93■□□□□ 0.14
COL20A1-203ENST00000422202 ANKRD1Q15327 319 aa15.93■□□□□ 0.14
COL20A1-203ENST00000422202 GNAI3P08754 354 aa15.93■□□□□ 0.14
COL20A1-203ENST00000422202 UBA5Q9GZZ9 404 aa15.93■□□□□ 0.14
COL20A1-203ENST00000422202 CYP46A1Q9Y6A2 500 aa15.93■□□□□ 0.14
COL20A1-203ENST00000422202 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
COL20A1-203ENST00000422202 TAF4BQ92750 862 aa15.92■□□□□ 0.14
COL20A1-203ENST00000422202 PPM1EQ8WY54 764 aa15.92■□□□□ 0.14
COL20A1-203ENST00000422202 ANKIB1Q9P2G1 1089 aa15.92■□□□□ 0.14
COL20A1-203ENST00000422202 UBE4AQ14139 1066 aa15.91■□□□□ 0.14
COL20A1-203ENST00000422202 PABPN1LA6NDY0 278 aaKnown RBP15.91■□□□□ 0.14
COL20A1-203ENST00000422202 CBFA2T2O43439 604 aa15.9■□□□□ 0.14
COL20A1-203ENST00000422202 CCDC85AQ96PX6 553 aaPredicted RBP15.9■□□□□ 0.14
COL20A1-203ENST00000422202 BCCIPQ9P287 314 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL20A1-203ENST00000422202 ABCF2Q9UG63 623 aa15.9■□□□□ 0.14
COL20A1-203ENST00000422202 POLR3DP05423 398 aaPredicted RBP15.9■□□□□ 0.14
COL20A1-203ENST00000422202 CCDC192P0DO97 292 aa15.9■□□□□ 0.14
COL20A1-203ENST00000422202 CDKL5O76039 1030 aa15.9■□□□□ 0.14
COL20A1-203ENST00000422202 DHX8Q14562 1220 aaKnown RBP15.9■□□□□ 0.14
COL20A1-203ENST00000422202 RBM10P98175 930 aaKnown RBP15.9■□□□□ 0.14
COL20A1-203ENST00000422202 ZPR1O75312 459 aa15.89■□□□□ 0.13
COL20A1-203ENST00000422202 IGHMBP2P38935 993 aaKnown RBP15.89■□□□□ 0.13
COL20A1-203ENST00000422202 MPNDQ8N594 471 aa15.89■□□□□ 0.13
COL20A1-203ENST00000422202 MACROD2A1Z1Q3 448 aa15.89■□□□□ 0.13
COL20A1-203ENST00000422202 SPG7Q9UQ90 795 aa15.89■□□□□ 0.13
COL20A1-203ENST00000422202 GSTTP1A0A1W2PQM5 241 aa15.89■□□□□ 0.13
COL20A1-203ENST00000422202 CCDC178Q5BJE1 867 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms