RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 THRAP3Q9Y2W1 955 aaKnown RBP8.58□□□□□ -1.04
HDAC8-212ENST00000421523 ABCC11Q96J66 1382 aa8.58□□□□□ -1.04
HDAC8-212ENST00000421523 AKAP12Q02952 1782 aa8.58□□□□□ -1.04
HDAC8-212ENST00000421523 TOMM70O94826 608 aa8.57□□□□□ -1.04
HDAC8-212ENST00000421523 HSPA1AP0DMV8 641 aaKnown RBP8.57□□□□□ -1.04
HDAC8-212ENST00000421523 HSPA1BP0DMV9 641 aaKnown RBP8.57□□□□□ -1.04
HDAC8-212ENST00000421523 FAM161AQ3B820 660 aa8.57□□□□□ -1.04
HDAC8-212ENST00000421523 MARCH10Q8NA82 808 aaPredicted RBP8.57□□□□□ -1.04
HDAC8-212ENST00000421523 ADGRF5Q8IZF2 1346 aa8.56□□□□□ -1.04
HDAC8-212ENST00000421523 LMO7Q8WWI1 1683 aa8.56□□□□□ -1.04
HDAC8-212ENST00000421523 ANKARQ7Z5J8 1434 aa8.56□□□□□ -1.04
HDAC8-212ENST00000421523 YTHDC2Q9H6S0 1430 aaKnown RBP8.56□□□□□ -1.04
HDAC8-212ENST00000421523 RPGRIP1LQ68CZ1 1315 aa8.55□□□□□ -1.04
HDAC8-212ENST00000421523 TULP4Q9NRJ4 1543 aa8.55□□□□□ -1.04
HDAC8-212ENST00000421523 ARHGEF28Q8N1W1 1705 aaKnown RBP8.55□□□□□ -1.04
HDAC8-212ENST00000421523 ZBTB7CA1YPR0 619 aa8.55□□□□□ -1.04
HDAC8-212ENST00000421523 NGDNQ8NEJ9 315 aaKnown RBP8.55□□□□□ -1.04
HDAC8-212ENST00000421523 COL5A2P05997 1499 aaPredicted RBP8.55□□□□□ -1.04
HDAC8-212ENST00000421523 CRB1P82279 1406 aa8.54□□□□□ -1.04
HDAC8-212ENST00000421523 PRAM1Q96QH2 718 aa8.54□□□□□ -1.04
HDAC8-212ENST00000421523 HIRIP3Q9BW71 556 aaPredicted RBP8.54□□□□□ -1.04
HDAC8-212ENST00000421523 COL24A1Q17RW2 1714 aa8.54□□□□□ -1.04
HDAC8-212ENST00000421523 WNK3Q9BYP7 1800 aa8.53□□□□□ -1.04
HDAC8-212ENST00000421523 SLC16A10Q8TF71 515 aa8.53□□□□□ -1.04
HDAC8-212ENST00000421523 NMRK2Q9NPI5 230 aa8.53□□□□□ -1.04
HDAC8-212ENST00000421523 PNPLA7Q6ZV29 1317 aa8.53□□□□□ -1.04
HDAC8-212ENST00000421523 PRR36Q9H6K5 1346 aa8.53□□□□□ -1.04
HDAC8-212ENST00000421523 TUBGCP6Q96RT7 1819 aa8.52□□□□□ -1.04
HDAC8-212ENST00000421523 CACNB1Q02641 598 aaPredicted RBP8.52□□□□□ -1.05
HDAC8-212ENST00000421523 MSL1Q68DK7 614 aa8.52□□□□□ -1.05
HDAC8-212ENST00000421523 ACSBG1Q96GR2 724 aa8.52□□□□□ -1.05
HDAC8-212ENST00000421523 BCL9O00512 1426 aa8.52□□□□□ -1.05
HDAC8-212ENST00000421523 NHSQ6T4R5 1651 aa8.52□□□□□ -1.05
HDAC8-212ENST00000421523 TOM1L2Q6ZVM7 507 aa8.51□□□□□ -1.05
HDAC8-212ENST00000421523 C16orf71Q8IYS4 520 aaPredicted RBP8.51□□□□□ -1.05
HDAC8-212ENST00000421523 LRRC4BQ9NT99 713 aa8.51□□□□□ -1.05
HDAC8-212ENST00000421523 TFCP2L1Q9NZI6 479 aa8.51□□□□□ -1.05
HDAC8-212ENST00000421523 QSER1Q2KHR3 1735 aa8.51□□□□□ -1.05
HDAC8-212ENST00000421523 BRD4O60885 1362 aaPredicted RBP8.5□□□□□ -1.05
HDAC8-212ENST00000421523 CPDO75976 1380 aa8.5□□□□□ -1.05
HDAC8-212ENST00000421523 TNRC18O15417 2968 aaPredicted RBP8.5□□□□□ -1.05
HDAC8-212ENST00000421523 ITGAEP38570 1179 aa8.5□□□□□ -1.05
HDAC8-212ENST00000421523 PPARGC1BQ86YN6 1023 aaKnown RBP8.5□□□□□ -1.05
HDAC8-212ENST00000421523 AKT1S1Q96B36 256 aa8.5□□□□□ -1.05
HDAC8-212ENST00000421523 POGKQ9P215 609 aa8.5□□□□□ -1.05
HDAC8-212ENST00000421523 BTAF1O14981 1849 aa8.5□□□□□ -1.05
HDAC8-212ENST00000421523 PIK3C2GO75747 1445 aa8.49□□□□□ -1.05
HDAC8-212ENST00000421523 RGL3Q3MIN7 710 aa8.49□□□□□ -1.05
HDAC8-212ENST00000421523 RBM46Q8TBY0 533 aaKnown RBP8.49□□□□□ -1.05
HDAC8-212ENST00000421523 MINK1Q8N4C8 1332 aaPredicted RBP8.49□□□□□ -1.05
HDAC8-212ENST00000421523 ANKRD30BQ9BXX2 1392 aa8.48□□□□□ -1.05
HDAC8-212ENST00000421523 KCNQ4P56696 695 aa8.48□□□□□ -1.05
HDAC8-212ENST00000421523 IGSF1Q8N6C5 1336 aa8.48□□□□□ -1.05
HDAC8-212ENST00000421523 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
HDAC8-212ENST00000421523 SIRT1Q96EB6 747 aa8.47□□□□□ -1.05
HDAC8-212ENST00000421523 USP6P35125 1406 aa8.46□□□□□ -1.05
HDAC8-212ENST00000421523 FSTL1Q12841 308 aa8.46□□□□□ -1.06
HDAC8-212ENST00000421523 ABTB2Q8N961 1025 aa8.46□□□□□ -1.06
HDAC8-212ENST00000421523 CD2APQ9Y5K6 639 aa8.46□□□□□ -1.06
HDAC8-212ENST00000421523 ITSN1Q15811 1721 aa8.46□□□□□ -1.06
HDAC8-212ENST00000421523 EXOC5O00471 708 aa8.45□□□□□ -1.06
HDAC8-212ENST00000421523 MLLT1Q03111 559 aaPredicted RBP8.45□□□□□ -1.06
HDAC8-212ENST00000421523 CDCA7Q9BWT1 371 aaPredicted RBP8.45□□□□□ -1.06
HDAC8-212ENST00000421523 USP19O94966 1318 aa8.45□□□□□ -1.06
HDAC8-212ENST00000421523 KIAA1210Q9ULL0 1709 aa8.45□□□□□ -1.06
HDAC8-212ENST00000421523 KAT6BQ8WYB5 2073 aa8.44□□□□□ -1.06
HDAC8-212ENST00000421523 CICQ96RK0 1608 aaPredicted RBP8.44□□□□□ -1.06
HDAC8-212ENST00000421523 PIK3C2AO00443 1686 aa8.44□□□□□ -1.06
HDAC8-212ENST00000421523 GCP02774 474 aa8.44□□□□□ -1.06
HDAC8-212ENST00000421523 TRPM1Q7Z4N2 1603 aa8.43□□□□□ -1.06
HDAC8-212ENST00000421523 WASLO00401 505 aaPredicted RBP8.43□□□□□ -1.06
HDAC8-212ENST00000421523 CSB-PGBD3P0DP91 1061 aa8.43□□□□□ -1.06
HDAC8-212ENST00000421523 CFAP70Q5T0N1 1121 aa8.43□□□□□ -1.06
HDAC8-212ENST00000421523 COL23A1Q86Y22 540 aaPredicted RBP8.43□□□□□ -1.06
HDAC8-212ENST00000421523 WDR17Q8IZU2 1322 aa8.43□□□□□ -1.06
HDAC8-212ENST00000421523 FOXN1O15353 648 aa8.42□□□□□ -1.06
HDAC8-212ENST00000421523 SLC27A3Q5K4L6 730 aa8.42□□□□□ -1.06
HDAC8-212ENST00000421523 ABHD8Q96I13 439 aa8.42□□□□□ -1.06
HDAC8-212ENST00000421523 ABCC6O95255 1503 aa8.42□□□□□ -1.06
HDAC8-212ENST00000421523 KCPQ6ZWJ8 1503 aa8.42□□□□□ -1.06
HDAC8-212ENST00000421523 SPATA31E1Q6ZUB1 1445 aa8.41□□□□□ -1.06
HDAC8-212ENST00000421523 SMC1BQ8NDV3 1235 aa8.41□□□□□ -1.06
HDAC8-212ENST00000421523 NUDT16Q96DE0 195 aaKnown RBP8.41□□□□□ -1.06
HDAC8-212ENST00000421523 C14orf93Q9H972 538 aaKnown RBP8.41□□□□□ -1.06
HDAC8-212ENST00000421523 TRAK1Q9UPV9 953 aa8.41□□□□□ -1.06
HDAC8-212ENST00000421523 AXIN2Q9Y2T1 843 aa8.41□□□□□ -1.06
HDAC8-212ENST00000421523 ACEP12821 1306 aa8.4□□□□□ -1.06
HDAC8-212ENST00000421523 NLRP13Q86W25 1043 aa8.4□□□□□ -1.06
HDAC8-212ENST00000421523 PPIP5K1Q6PFW1 1433 aa8.39□□□□□ -1.07
HDAC8-212ENST00000421523 CCDC85CA6NKD9 419 aa8.39□□□□□ -1.07
HDAC8-212ENST00000421523 ARHGAP27Q6ZUM4 889 aa8.39□□□□□ -1.07
HDAC8-212ENST00000421523 SYTL4Q96C24 671 aaPredicted RBP8.39□□□□□ -1.07
HDAC8-212ENST00000421523 CARD10Q9BWT7 1032 aa8.39□□□□□ -1.07
HDAC8-212ENST00000421523 RRAGCQ9HB90 399 aa8.39□□□□□ -1.07
HDAC8-212ENST00000421523 COL18A1P39060 1754 aa8.39□□□□□ -1.07
HDAC8-212ENST00000421523 RGPD5Q99666 1765 aa8.39□□□□□ -1.07
HDAC8-212ENST00000421523 POLR3AO14802 1390 aaPredicted RBP8.38□□□□□ -1.07
HDAC8-212ENST00000421523 PKD1L3Q7Z443 1732 aa8.38□□□□□ -1.07
HDAC8-212ENST00000421523 SLC4A1APQ9BWU0 796 aaKnown RBP8.38□□□□□ -1.07
HDAC8-212ENST00000421523 PRDM10Q9NQV6 1147 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms