RNA–Protein interactions for RNA: ENST00000421423.1

LINC00403-201, humanhuman

TSL 2 BASIC

Gene LINC00403, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00403-201ENST00000421423 CSB-PGBD3P0DP91 1061 aa15.27■□□□□ 0.04
LINC00403-201ENST00000421423 SPON1Q9HCB6 807 aa15.27■□□□□ 0.04
LINC00403-201ENST00000421423 CPSF1Q10570 1443 aaKnown RBP15.26■□□□□ 0.03
LINC00403-201ENST00000421423 EXOC5O00471 708 aa15.26■□□□□ 0.03
LINC00403-201ENST00000421423 SOX12O15370 315 aa15.26■□□□□ 0.03
LINC00403-201ENST00000421423 MARCH10Q8NA82 808 aaPredicted RBP15.26■□□□□ 0.03
LINC00403-201ENST00000421423 KTN1Q86UP2 1357 aaKnown RBP15.25■□□□□ 0.03
LINC00403-201ENST00000421423 KCNQ2O43526 872 aa15.25■□□□□ 0.03
LINC00403-201ENST00000421423 COL18A1P39060 1754 aa15.25■□□□□ 0.03
LINC00403-201ENST00000421423 TRPM1Q7Z4N2 1603 aa15.25■□□□□ 0.03
LINC00403-201ENST00000421423 BCL9O00512 1426 aa15.24■□□□□ 0.03
LINC00403-201ENST00000421423 PIK3C2AO00443 1686 aa15.23■□□□□ 0.03
LINC00403-201ENST00000421423 RREB1Q92766 1687 aa15.23■□□□□ 0.03
LINC00403-201ENST00000421423 PTF1AQ7RTS3 328 aa15.22■□□□□ 0.03
LINC00403-201ENST00000421423 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC00403-201ENST00000421423 PROM2Q8N271 834 aa15.22■□□□□ 0.03
LINC00403-201ENST00000421423 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
LINC00403-201ENST00000421423 PPP1R1BQ9UD71 204 aaPredicted RBP15.22■□□□□ 0.03
LINC00403-201ENST00000421423 CCDC7Q96M83 1385 aa15.22■□□□□ 0.03
LINC00403-201ENST00000421423 SBNO2Q9Y2G9 1366 aa15.22■□□□□ 0.03
LINC00403-201ENST00000421423 NUP188Q5SRE5 1749 aa15.21■□□□□ 0.03
LINC00403-201ENST00000421423 PEAK1Q9H792 1746 aa15.21■□□□□ 0.03
LINC00403-201ENST00000421423 USP31Q70CQ4 1352 aa15.21■□□□□ 0.02
LINC00403-201ENST00000421423 HDGFL2Q7Z4V5 671 aaPredicted RBP15.2■□□□□ 0.02
LINC00403-201ENST00000421423 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
LINC00403-201ENST00000421423 PUS7Q96PZ0 661 aaKnown RBP15.2■□□□□ 0.02
LINC00403-201ENST00000421423 AKAP12Q02952 1782 aa15.19■□□□□ 0.02
LINC00403-201ENST00000421423 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
LINC00403-201ENST00000421423 TXNRD1Q16881 649 aa15.19■□□□□ 0.02
LINC00403-201ENST00000421423 SLC12A5Q9H2X9 1139 aa15.19■□□□□ 0.02
LINC00403-201ENST00000421423 SBF2Q86WG5 1849 aa15.19■□□□□ 0.02
LINC00403-201ENST00000421423 LRRC37A3O60309 1634 aa15.18■□□□□ 0.02
LINC00403-201ENST00000421423 NME9Q86XW9 330 aa15.18■□□□□ 0.02
LINC00403-201ENST00000421423 ANO8Q9HCE9 1232 aaPredicted RBP15.18■□□□□ 0.02
LINC00403-201ENST00000421423 NLRP2Q9NX02 1062 aa15.18■□□□□ 0.02
LINC00403-201ENST00000421423 TERF2IPQ9NYB0 399 aa15.18■□□□□ 0.02
LINC00403-201ENST00000421423 NFAT5O94916 1531 aa15.17■□□□□ 0.02
LINC00403-201ENST00000421423 ERBB3P21860 1342 aa15.17■□□□□ 0.02
LINC00403-201ENST00000421423 RGPD5Q99666 1765 aa15.16■□□□□ 0.02
LINC00403-201ENST00000421423 IL2RBP14784 551 aa15.16■□□□□ 0.02
LINC00403-201ENST00000421423 STK32BQ9NY57 414 aa15.16■□□□□ 0.02
LINC00403-201ENST00000421423 ABCC6O95255 1503 aa15.16■□□□□ 0.02
LINC00403-201ENST00000421423 RGPD3A6NKT7 1758 aaPredicted RBP15.16■□□□□ 0.02
LINC00403-201ENST00000421423 RGPD4Q7Z3J3 1758 aa15.16■□□□□ 0.02
LINC00403-201ENST00000421423 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
LINC00403-201ENST00000421423 SLC24A1O60721 1099 aa15.15■□□□□ 0.02
LINC00403-201ENST00000421423 SLC15A2Q16348 729 aa15.15■□□□□ 0.02
LINC00403-201ENST00000421423 YY1P25490 414 aa15.14■□□□□ 0.01
LINC00403-201ENST00000421423 ANKRD24Q8TF21 1146 aa15.14■□□□□ 0.01
LINC00403-201ENST00000421423 PDGFDQ9GZP0 370 aaPredicted RBP15.14■□□□□ 0.01
LINC00403-201ENST00000421423 CD163L1Q9NR16 1453 aa15.14■□□□□ 0.01
LINC00403-201ENST00000421423 EDC4Q6P2E9 1401 aaKnown RBP15.13■□□□□ 0.01
LINC00403-201ENST00000421423 TONSLQ96HA7 1378 aa15.12■□□□□ 0.01
LINC00403-201ENST00000421423 TNS2Q63HR2 1409 aa15.12■□□□□ 0.01
LINC00403-201ENST00000421423 ZBTB7AO95365 584 aa15.12■□□□□ 0.01
LINC00403-201ENST00000421423 IP6K1Q92551 441 aa15.12■□□□□ 0.01
LINC00403-201ENST00000421423 ACSBG1Q96GR2 724 aa15.12■□□□□ 0.01
LINC00403-201ENST00000421423 MON2Q7Z3U7 1717 aa15.12■□□□□ 0.01
LINC00403-201ENST00000421423 WNK3Q9BYP7 1800 aa15.11■□□□□ 0.01
LINC00403-201ENST00000421423 PTGER2P43116 358 aa15.11■□□□□ 0.01
LINC00403-201ENST00000421423 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
LINC00403-201ENST00000421423 A0A1W2PP64 1363 aa15.1■□□□□ 0.01
LINC00403-201ENST00000421423 ST20-MTHFSA0A0A6YYL1 179 aa15.09■□□□□ 0.01
LINC00403-201ENST00000421423 TESK2Q96S53 571 aa15.09■□□□□ 0.01
LINC00403-201ENST00000421423 MTFR1LQ9H019 292 aa15.09■□□□□ 0.01
LINC00403-201ENST00000421423 COG3Q96JB2 828 aa15.08■□□□□ 0
LINC00403-201ENST00000421423 USP54Q70EL1 1684 aa15.08■□□□□ 0
LINC00403-201ENST00000421423 KAT6BQ8WYB5 2073 aa15.07■□□□□ 0
LINC00403-201ENST00000421423 CASZ1Q86V15 1759 aa15.06■□□□□ 0
LINC00403-201ENST00000421423 DDX54Q8TDD1 881 aaKnown RBP15.06■□□□□ 0
LINC00403-201ENST00000421423 LTV1Q96GA3 475 aaPredicted RBP15.06■□□□□ 0
LINC00403-201ENST00000421423 SYT17Q9BSW7 474 aa15.06■□□□□ 0
LINC00403-201ENST00000421423 AMPHP49418 695 aa15.05■□□□□ -0
LINC00403-201ENST00000421423 SGIP1Q9BQI5 828 aa15.05■□□□□ -0
LINC00403-201ENST00000421423 LTN1O94822 1766 aa15.04■□□□□ -0
LINC00403-201ENST00000421423 HOXC9P31274 260 aa15.04■□□□□ -0
LINC00403-201ENST00000421423 SLC27A3Q5K4L6 730 aa15.04■□□□□ -0
LINC00403-201ENST00000421423 FHDC1Q9C0D6 1143 aaPredicted RBP15.04■□□□□ -0
LINC00403-201ENST00000421423 LRRC4BQ9NT99 713 aa15.04■□□□□ -0
LINC00403-201ENST00000421423 NHSQ6T4R5 1651 aa15.03■□□□□ -0
LINC00403-201ENST00000421423 MAP3K19Q56UN5 1328 aa15.03■□□□□ -0
LINC00403-201ENST00000421423 ARXQ96QS3 562 aa15.03■□□□□ -0
LINC00403-201ENST00000421423 FBLN1P23142 703 aa15.02■□□□□ -0
LINC00403-201ENST00000421423 ZCRB1Q8TBF4 217 aaKnown RBP15.02■□□□□ -0
LINC00403-201ENST00000421423 SLC16A10Q8TF71 515 aa15.02■□□□□ -0
LINC00403-201ENST00000421423 FYB1O15117 783 aa15.01□□□□□ -0.01
LINC00403-201ENST00000421423 PRIM1P49642 420 aaKnown RBP15.01□□□□□ -0.01
LINC00403-201ENST00000421423 TMF1P82094 1093 aa15.01□□□□□ -0.01
LINC00403-201ENST00000421423 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
LINC00403-201ENST00000421423 ANKRD36BQ8N2N9 1353 aa15□□□□□ -0.01
LINC00403-201ENST00000421423 ZNF827Q17R98 1081 aa15□□□□□ -0.01
LINC00403-201ENST00000421423 SYTL4Q96C24 671 aaPredicted RBP15□□□□□ -0.01
LINC00403-201ENST00000421423 CGNL1Q0VF96 1302 aa14.99□□□□□ -0.01
LINC00403-201ENST00000421423 UTRNP46939 3433 aa14.99□□□□□ -0.01
LINC00403-201ENST00000421423 CDCA8Q53HL2 280 aa14.98□□□□□ -0.01
LINC00403-201ENST00000421423 NBPF6Q5VWK0 638 aa14.98□□□□□ -0.01
LINC00403-201ENST00000421423 NBPF4Q96M43 638 aa14.98□□□□□ -0.01
LINC00403-201ENST00000421423 TFCP2L1Q9NZI6 479 aa14.98□□□□□ -0.01
LINC00403-201ENST00000421423 BTAF1O14981 1849 aa14.98□□□□□ -0.01
LINC00403-201ENST00000421423 RRS1Q15050 365 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms