RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
CLCN4-203ENST00000421085 CDK5RAP3Q96JB5 506 aa14.6□□□□□ -0.07
CLCN4-203ENST00000421085 PDRG1Q9NUG6 133 aa14.6□□□□□ -0.07
CLCN4-203ENST00000421085 CGNQ9P2M7 1197 aaKnown RBP14.6□□□□□ -0.07
CLCN4-203ENST00000421085 ZHX1Q9UKY1 873 aaPredicted RBP14.59□□□□□ -0.07
CLCN4-203ENST00000421085 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
CLCN4-203ENST00000421085 KIF21BO75037 1637 aa14.59□□□□□ -0.07
CLCN4-203ENST00000421085 CUX1P39880 1505 aa14.59□□□□□ -0.07
CLCN4-203ENST00000421085 WDR63Q8IWG1 891 aa14.59□□□□□ -0.07
CLCN4-203ENST00000421085 CFAP45Q9UL16 551 aa14.59□□□□□ -0.07
CLCN4-203ENST00000421085 LRRFIP2Q9Y608 721 aaKnown RBP14.59□□□□□ -0.07
CLCN4-203ENST00000421085 LRRC9Q6ZRR7 1453 aa14.59□□□□□ -0.07
CLCN4-203ENST00000421085 ZMYND15Q9H091 742 aa14.58□□□□□ -0.07
CLCN4-203ENST00000421085 STAC3Q96MF2 364 aa14.58□□□□□ -0.07
CLCN4-203ENST00000421085 ENOX2Q16206 610 aaKnown RBP14.58□□□□□ -0.08
CLCN4-203ENST00000421085 TAX1BP1Q86VP1 789 aa14.58□□□□□ -0.08
CLCN4-203ENST00000421085 TBC1D2BQ9UPU7 963 aa14.58□□□□□ -0.08
CLCN4-203ENST00000421085 TMEM132EQ6IEE7 984 aa14.58□□□□□ -0.08
CLCN4-203ENST00000421085 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
CLCN4-203ENST00000421085 JAKMIP1Q96N16 626 aaKnown RBP14.58□□□□□ -0.08
CLCN4-203ENST00000421085 TRERF1Q96PN7 1200 aa14.58□□□□□ -0.08
CLCN4-203ENST00000421085 IQCEQ6IPM2 695 aa14.57□□□□□ -0.08
CLCN4-203ENST00000421085 CCAR1Q8IX12 1150 aaKnown RBP14.57□□□□□ -0.08
CLCN4-203ENST00000421085 ZRSR2Q15696 482 aaKnown RBP14.57□□□□□ -0.08
CLCN4-203ENST00000421085 ZSCAN31Q96LW9 406 aaPredicted RBP14.57□□□□□ -0.08
CLCN4-203ENST00000421085 LUC7LQ9NQ29 371 aaKnown RBP14.57□□□□□ -0.08
CLCN4-203ENST00000421085 GIMAP7Q8NHV1 300 aa14.57□□□□□ -0.08
CLCN4-203ENST00000421085 SMTNL1A8MU46 457 aa14.57□□□□□ -0.08
CLCN4-203ENST00000421085 SYTL4Q96C24 671 aaPredicted RBP14.57□□□□□ -0.08
CLCN4-203ENST00000421085 CALCOCO1Q9P1Z2 691 aa14.57□□□□□ -0.08
CLCN4-203ENST00000421085 BLOC1S2Q6QNY1 142 aa14.56□□□□□ -0.08
CLCN4-203ENST00000421085 CCT4P50991 539 aaKnown RBP14.56□□□□□ -0.08
CLCN4-203ENST00000421085 KIF2AO00139 706 aaPredicted RBP14.56□□□□□ -0.08
CLCN4-203ENST00000421085 PSME1Q06323 249 aa14.56□□□□□ -0.08
CLCN4-203ENST00000421085 PPP4R3BQ5MIZ7 849 aa14.56□□□□□ -0.08
CLCN4-203ENST00000421085 PPP6R1Q9UPN7 881 aa14.56□□□□□ -0.08
CLCN4-203ENST00000421085 STIM1Q13586 685 aa14.56□□□□□ -0.08
CLCN4-203ENST00000421085 SYCP1Q15431 976 aa14.56□□□□□ -0.08
CLCN4-203ENST00000421085 KIF18AQ8NI77 898 aa14.56□□□□□ -0.08
CLCN4-203ENST00000421085 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
CLCN4-203ENST00000421085 SEPT7Q16181 437 aaKnown RBP14.55□□□□□ -0.08
CLCN4-203ENST00000421085 CWC27Q6UX04 472 aaKnown RBP14.55□□□□□ -0.08
CLCN4-203ENST00000421085 NBPF1Q3BBV0 1214 aa14.55□□□□□ -0.08
CLCN4-203ENST00000421085 POLR3GO15318 223 aaPredicted RBP14.55□□□□□ -0.08
CLCN4-203ENST00000421085 EPB41L2O43491 1005 aaKnown RBP14.55□□□□□ -0.08
CLCN4-203ENST00000421085 CFAP100Q494V2 611 aa14.55□□□□□ -0.08
CLCN4-203ENST00000421085 CCDC183Q5T5S1 534 aa14.55□□□□□ -0.08
CLCN4-203ENST00000421085 TNPO1Q92973 898 aaKnown RBP14.55□□□□□ -0.08
CLCN4-203ENST00000421085 TANGO6Q9C0B7 1094 aa14.55□□□□□ -0.08
CLCN4-203ENST00000421085 SRCIN1Q9C0H9 1055 aa14.55□□□□□ -0.08
CLCN4-203ENST00000421085 ANKRD50Q9ULJ7 1429 aa14.55□□□□□ -0.08
CLCN4-203ENST00000421085 ARHGAP29Q52LW3 1261 aa14.55□□□□□ -0.08
CLCN4-203ENST00000421085 TBC1D2Q9BYX2 928 aa14.55□□□□□ -0.08
CLCN4-203ENST00000421085 ANKRD62A6NC57 917 aa14.54□□□□□ -0.08
CLCN4-203ENST00000421085 SSFA2P28290 1259 aa14.54□□□□□ -0.08
CLCN4-203ENST00000421085 TXLNBQ8N3L3 684 aa14.54□□□□□ -0.08
CLCN4-203ENST00000421085 KRT18P05783 430 aaKnown RBP14.54□□□□□ -0.08
CLCN4-203ENST00000421085 RAPGEF4Q8WZA2 1011 aa14.54□□□□□ -0.08
CLCN4-203ENST00000421085 CRACR2AQ9BSW2 395 aa14.54□□□□□ -0.08
CLCN4-203ENST00000421085 SHTN1A0MZ66 631 aa14.54□□□□□ -0.08
CLCN4-203ENST00000421085 SPDYE4A6NLX3 237 aa14.54□□□□□ -0.08
CLCN4-203ENST00000421085 SFPQP23246 707 aaKnown RBP eCLIP14.54□□□□□ -0.08
CLCN4-203ENST00000421085 TNNT1P13805 278 aa14.53□□□□□ -0.08
CLCN4-203ENST00000421085 GAS2L2Q8NHY3 880 aa14.53□□□□□ -0.08
CLCN4-203ENST00000421085 TRIM22Q8IYM9 498 aa14.53□□□□□ -0.08
CLCN4-203ENST00000421085 GBP3Q9H0R5 595 aa14.53□□□□□ -0.08
CLCN4-203ENST00000421085 SIL1Q9H173 461 aa14.53□□□□□ -0.08
CLCN4-203ENST00000421085 USP25Q9UHP3 1055 aa14.53□□□□□ -0.08
CLCN4-203ENST00000421085 TTC39AQ5SRH9 613 aa14.53□□□□□ -0.08
CLCN4-203ENST00000421085 URI1O94763 535 aaPredicted RBP14.53□□□□□ -0.08
CLCN4-203ENST00000421085 SLFN5Q08AF3 891 aa14.53□□□□□ -0.08
CLCN4-203ENST00000421085 NUTM2GQ5VZR2 741 aa14.53□□□□□ -0.08
CLCN4-203ENST00000421085 CCDC148Q8NFR7 591 aa14.53□□□□□ -0.08
CLCN4-203ENST00000421085 IBSPP21815 317 aaPredicted RBP14.53□□□□□ -0.08
CLCN4-203ENST00000421085 CASTP20810 708 aaKnown RBP14.52□□□□□ -0.08
CLCN4-203ENST00000421085 KIAA1328Q86T90 577 aa14.52□□□□□ -0.08
CLCN4-203ENST00000421085 CASQ1P31415 396 aa14.52□□□□□ -0.08
CLCN4-203ENST00000421085 C20orf194Q5TEA3 1177 aa14.52□□□□□ -0.08
CLCN4-203ENST00000421085 CFAP70Q5T0N1 1121 aa14.52□□□□□ -0.08
CLCN4-203ENST00000421085 FERMT3Q86UX7 667 aa14.52□□□□□ -0.08
CLCN4-203ENST00000421085 C16orf45Q96MC5 204 aaPredicted RBP14.52□□□□□ -0.08
CLCN4-203ENST00000421085 CLIP2Q9UDT6 1046 aa14.52□□□□□ -0.08
CLCN4-203ENST00000421085 GTF2F1P35269 517 aaKnown RBP eCLIP14.52□□□□□ -0.09
CLCN4-203ENST00000421085 TMEM57Q8N5G2 664 aa14.52□□□□□ -0.09
CLCN4-203ENST00000421085 SCAPERQ9BY12 1400 aa14.52□□□□□ -0.09
CLCN4-203ENST00000421085 INCENPQ9NQS7 918 aa14.52□□□□□ -0.09
CLCN4-203ENST00000421085 CCDC158Q5M9N0 1113 aa14.51□□□□□ -0.09
CLCN4-203ENST00000421085 RBM33Q96EV2 1170 aaKnown RBP14.51□□□□□ -0.09
CLCN4-203ENST00000421085 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
CLCN4-203ENST00000421085 RRBP1Q9P2E9 1410 aaKnown RBP14.51□□□□□ -0.09
CLCN4-203ENST00000421085 ZSCAN12O43309 604 aa14.51□□□□□ -0.09
CLCN4-203ENST00000421085 CCDC69A6NI79 296 aa14.51□□□□□ -0.09
CLCN4-203ENST00000421085 DDX11Q96FC9 970 aa14.51□□□□□ -0.09
CLCN4-203ENST00000421085 CCDC83Q8IWF9 413 aa14.5□□□□□ -0.09
CLCN4-203ENST00000421085 IL1RAPL2Q9NP60 686 aa14.5□□□□□ -0.09
CLCN4-203ENST00000421085 TRMT1Q9NXH9 659 aaKnown RBP14.5□□□□□ -0.09
CLCN4-203ENST00000421085 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
CLCN4-203ENST00000421085 DYNC1I1O14576 645 aa14.5□□□□□ -0.09
CLCN4-203ENST00000421085 HDGFL1Q5TGJ6 251 aa14.5□□□□□ -0.09
CLCN4-203ENST00000421085 AACSQ86V21 672 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms