RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 RGPD4Q7Z3J3 1758 aa24.2■■□□□ 1.46
UPF3AP3-201ENST00000420996 ARHGEF25Q86VW2 580 aa24.19■■□□□ 1.46
UPF3AP3-201ENST00000420996 WNK3Q9BYP7 1800 aa24.19■■□□□ 1.46
UPF3AP3-201ENST00000420996 PLSCR1O15162 318 aa24.18■■□□□ 1.46
UPF3AP3-201ENST00000420996 KCNH5Q8NCM2 988 aa24.18■■□□□ 1.46
UPF3AP3-201ENST00000420996 SIN3AQ96ST3 1273 aa24.18■■□□□ 1.46
UPF3AP3-201ENST00000420996 RGPD5Q99666 1765 aa24.18■■□□□ 1.46
UPF3AP3-201ENST00000420996 CPSF1Q10570 1443 aaKnown RBP24.18■■□□□ 1.46
UPF3AP3-201ENST00000420996 ROCK2O75116 1388 aaKnown RBP24.17■■□□□ 1.46
UPF3AP3-201ENST00000420996 CDCA7Q9BWT1 371 aaPredicted RBP24.17■■□□□ 1.46
UPF3AP3-201ENST00000420996 TTC21AQ8NDW8 1320 aa24.16■■□□□ 1.46
UPF3AP3-201ENST00000420996 SPON1Q9HCB6 807 aa24.16■■□□□ 1.46
UPF3AP3-201ENST00000420996 BCL11BQ9C0K0 894 aaPredicted RBP24.15■■□□□ 1.46
UPF3AP3-201ENST00000420996 KCNQ2O43526 872 aa24.14■■□□□ 1.45
UPF3AP3-201ENST00000420996 CARD10Q9BWT7 1032 aa24.14■■□□□ 1.45
UPF3AP3-201ENST00000420996 BCL9O00512 1426 aa24.13■■□□□ 1.45
UPF3AP3-201ENST00000420996 MARCH10Q8NA82 808 aaPredicted RBP24.13■■□□□ 1.45
UPF3AP3-201ENST00000420996 NEUROD1Q13562 356 aa24.12■■□□□ 1.45
UPF3AP3-201ENST00000420996 SOX12O15370 315 aa24.11■■□□□ 1.45
UPF3AP3-201ENST00000420996 CSB-PGBD3P0DP91 1061 aa24.11■■□□□ 1.45
UPF3AP3-201ENST00000420996 PTF1AQ7RTS3 328 aa24.11■■□□□ 1.45
UPF3AP3-201ENST00000420996 KTN1Q86UP2 1357 aaKnown RBP24.11■■□□□ 1.45
UPF3AP3-201ENST00000420996 NFAT5O94916 1531 aa24.1■■□□□ 1.45
UPF3AP3-201ENST00000420996 PPP1R1BQ9UD71 204 aaPredicted RBP24.1■■□□□ 1.45
UPF3AP3-201ENST00000420996 MON2Q7Z3U7 1717 aa24.08■■□□□ 1.45
UPF3AP3-201ENST00000420996 ABCC6O95255 1503 aa24.08■■□□□ 1.45
UPF3AP3-201ENST00000420996 EXOC5O00471 708 aa24.07■■□□□ 1.44
UPF3AP3-201ENST00000420996 PROM2Q8N271 834 aa24.07■■□□□ 1.44
UPF3AP3-201ENST00000420996 ANO8Q9HCE9 1232 aaPredicted RBP24.07■■□□□ 1.44
UPF3AP3-201ENST00000420996 CCDC7Q96M83 1385 aa24.06■■□□□ 1.44
UPF3AP3-201ENST00000420996 CASZ1Q86V15 1759 aa24.06■■□□□ 1.44
UPF3AP3-201ENST00000420996 SBNO2Q9Y2G9 1366 aa24.05■■□□□ 1.44
UPF3AP3-201ENST00000420996 NINLQ9Y2I6 1382 aa24.05■■□□□ 1.44
UPF3AP3-201ENST00000420996 USP31Q70CQ4 1352 aa24.03■■□□□ 1.44
UPF3AP3-201ENST00000420996 USP54Q70EL1 1684 aa24.03■■□□□ 1.44
UPF3AP3-201ENST00000420996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.02■■□□□ 1.44
UPF3AP3-201ENST00000420996 DCAF8L1A6NGE4 600 aa24.01■■□□□ 1.43
UPF3AP3-201ENST00000420996 YY1P25490 414 aa24.01■■□□□ 1.43
UPF3AP3-201ENST00000420996 TXNRD1Q16881 649 aa24.01■■□□□ 1.43
UPF3AP3-201ENST00000420996 TNS2Q63HR2 1409 aa24.01■■□□□ 1.43
UPF3AP3-201ENST00000420996 CARD11Q9BXL7 1154 aa23.99■■□□□ 1.43
UPF3AP3-201ENST00000420996 PDGFDQ9GZP0 370 aaPredicted RBP23.99■■□□□ 1.43
UPF3AP3-201ENST00000420996 CD163L1Q9NR16 1453 aa23.99■■□□□ 1.43
UPF3AP3-201ENST00000420996 LTN1O94822 1766 aa23.98■■□□□ 1.43
UPF3AP3-201ENST00000420996 NME9Q86XW9 330 aa23.98■■□□□ 1.43
UPF3AP3-201ENST00000420996 ERBB3P21860 1342 aa23.98■■□□□ 1.43
UPF3AP3-201ENST00000420996 NLRP2Q9NX02 1062 aa23.97■■□□□ 1.43
UPF3AP3-201ENST00000420996 STK32BQ9NY57 414 aa23.97■■□□□ 1.43
UPF3AP3-201ENST00000420996 NHSQ6T4R5 1651 aa23.96■■□□□ 1.43
UPF3AP3-201ENST00000420996 HDGFL2Q7Z4V5 671 aaPredicted RBP23.96■■□□□ 1.43
UPF3AP3-201ENST00000420996 TMC1Q8TDI8 760 aa23.96■■□□□ 1.43
UPF3AP3-201ENST00000420996 ZBTB7AO95365 584 aa23.95■■□□□ 1.42
UPF3AP3-201ENST00000420996 SLC15A2Q16348 729 aa23.95■■□□□ 1.42
UPF3AP3-201ENST00000420996 SLC12A5Q9H2X9 1139 aa23.95■■□□□ 1.42
UPF3AP3-201ENST00000420996 EDC4Q6P2E9 1401 aaKnown RBP23.93■■□□□ 1.42
UPF3AP3-201ENST00000420996 IL2RBP14784 551 aa23.93■■□□□ 1.42
UPF3AP3-201ENST00000420996 PTGER2P43116 358 aa23.92■■□□□ 1.42
UPF3AP3-201ENST00000420996 ANKRD24Q8TF21 1146 aa23.92■■□□□ 1.42
UPF3AP3-201ENST00000420996 PUS7Q96PZ0 661 aaKnown RBP23.92■■□□□ 1.42
UPF3AP3-201ENST00000420996 TERF2IPQ9NYB0 399 aa23.92■■□□□ 1.42
UPF3AP3-201ENST00000420996 ATF5Q9Y2D1 282 aaPredicted RBP23.92■■□□□ 1.42
UPF3AP3-201ENST00000420996 ACSBG1Q96GR2 724 aa23.91■■□□□ 1.42
UPF3AP3-201ENST00000420996 MYOM1P52179 1685 aa23.91■■□□□ 1.42
UPF3AP3-201ENST00000420996 KAT6BQ8WYB5 2073 aa23.88■■□□□ 1.41
UPF3AP3-201ENST00000420996 MTFR1LQ9H019 292 aa23.88■■□□□ 1.41
UPF3AP3-201ENST00000420996 BTAF1O14981 1849 aa23.88■■□□□ 1.41
UPF3AP3-201ENST00000420996 A0A1W2PP64 1363 aa23.88■■□□□ 1.41
UPF3AP3-201ENST00000420996 PAPPAQ13219 1627 aa23.85■■□□□ 1.41
UPF3AP3-201ENST00000420996 IP6K1Q92551 441 aa23.85■■□□□ 1.41
UPF3AP3-201ENST00000420996 TONSLQ96HA7 1378 aa23.85■■□□□ 1.41
UPF3AP3-201ENST00000420996 FAM208AQ9UK61 1670 aaKnown RBP23.84■■□□□ 1.41
UPF3AP3-201ENST00000420996 SGIP1Q9BQI5 828 aa23.84■■□□□ 1.41
UPF3AP3-201ENST00000420996 SYT17Q9BSW7 474 aa23.83■■□□□ 1.41
UPF3AP3-201ENST00000420996 FHDC1Q9C0D6 1143 aaPredicted RBP23.83■■□□□ 1.41
UPF3AP3-201ENST00000420996 TESK2Q96S53 571 aa23.8■■□□□ 1.4
UPF3AP3-201ENST00000420996 DDX54Q8TDD1 881 aaKnown RBP23.79■■□□□ 1.4
UPF3AP3-201ENST00000420996 LTV1Q96GA3 475 aaPredicted RBP23.79■■□□□ 1.4
UPF3AP3-201ENST00000420996 LRRC4BQ9NT99 713 aa23.79■■□□□ 1.4
UPF3AP3-201ENST00000420996 SLC24A1O60721 1099 aa23.78■■□□□ 1.4
UPF3AP3-201ENST00000420996 COG3Q96JB2 828 aa23.78■■□□□ 1.4
UPF3AP3-201ENST00000420996 ARXQ96QS3 562 aa23.78■■□□□ 1.4
UPF3AP3-201ENST00000420996 ST20-MTHFSA0A0A6YYL1 179 aa23.77■■□□□ 1.4
UPF3AP3-201ENST00000420996 ZNF827Q17R98 1081 aa23.77■■□□□ 1.4
UPF3AP3-201ENST00000420996 SLC27A3Q5K4L6 730 aa23.76■■□□□ 1.39
UPF3AP3-201ENST00000420996 MAP3K19Q56UN5 1328 aa23.76■■□□□ 1.39
UPF3AP3-201ENST00000420996 HOXC9P31274 260 aa23.75■■□□□ 1.39
UPF3AP3-201ENST00000420996 QSER1Q2KHR3 1735 aa23.75■■□□□ 1.39
UPF3AP3-201ENST00000420996 AMPHP49418 695 aa23.74■■□□□ 1.39
UPF3AP3-201ENST00000420996 AKT1S1Q96B36 256 aa23.74■■□□□ 1.39
UPF3AP3-201ENST00000420996 MAP3K5Q99683 1374 aa23.74■■□□□ 1.39
UPF3AP3-201ENST00000420996 RGPD2P0DJD1 1756 aa23.73■■□□□ 1.39
UPF3AP3-201ENST00000420996 SLC16A10Q8TF71 515 aa23.73■■□□□ 1.39
UPF3AP3-201ENST00000420996 CHD4Q14839 1912 aa23.72■■□□□ 1.39
UPF3AP3-201ENST00000420996 ANKRD36BQ8N2N9 1353 aa23.71■■□□□ 1.39
UPF3AP3-201ENST00000420996 FBLN1P23142 703 aa23.71■■□□□ 1.39
UPF3AP3-201ENST00000420996 PRIM1P49642 420 aaKnown RBP23.71■■□□□ 1.39
UPF3AP3-201ENST00000420996 ZCRB1Q8TBF4 217 aaKnown RBP23.71■■□□□ 1.39
UPF3AP3-201ENST00000420996 DOT1LQ8TEK3 1739 aa23.7■■□□□ 1.39
UPF3AP3-201ENST00000420996 SYTL4Q96C24 671 aaPredicted RBP23.7■■□□□ 1.38
UPF3AP3-201ENST00000420996 SHANK3Q9BYB0 1731 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms