RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ARHGEF25Q86VW2 580 aa24.67■■□□□ 1.54
MSH6-203ENST00000420813 SBF2Q86WG5 1849 aa24.67■■□□□ 1.54
MSH6-203ENST00000420813 WDR17Q8IZU2 1322 aa24.66■■□□□ 1.54
MSH6-203ENST00000420813 PSDA5PKW4 1024 aaPredicted RBP24.66■■□□□ 1.54
MSH6-203ENST00000420813 EZH2Q15910 746 aaKnown RBP24.66■■□□□ 1.54
MSH6-203ENST00000420813 CAMKK2Q96RR4 588 aa24.66■■□□□ 1.54
MSH6-203ENST00000420813 CD163L1Q9NR16 1453 aa24.64■■□□□ 1.54
MSH6-203ENST00000420813 APBA3O96018 575 aa24.64■■□□□ 1.54
MSH6-203ENST00000420813 TOM1L2Q6ZVM7 507 aa24.64■■□□□ 1.54
MSH6-203ENST00000420813 AXIN2Q9Y2T1 843 aa24.64■■□□□ 1.54
MSH6-203ENST00000420813 NUP188Q5SRE5 1749 aa24.64■■□□□ 1.53
MSH6-203ENST00000420813 OVOS2A0A0G2JMS6 1433 aa24.63■■□□□ 1.53
MSH6-203ENST00000420813 OVOS2A0A0J9YW53 1432 aa24.63■■□□□ 1.53
MSH6-203ENST00000420813 OVOS2Q6IE36 1432 aa24.63■■□□□ 1.53
MSH6-203ENST00000420813 USP31Q70CQ4 1352 aa24.63■■□□□ 1.53
MSH6-203ENST00000420813 RGPD3A6NKT7 1758 aaPredicted RBP24.62■■□□□ 1.53
MSH6-203ENST00000420813 RGPD4Q7Z3J3 1758 aa24.62■■□□□ 1.53
MSH6-203ENST00000420813 PUS7Q96PZ0 661 aaKnown RBP24.61■■□□□ 1.53
MSH6-203ENST00000420813 LTN1O94822 1766 aa24.61■■□□□ 1.53
MSH6-203ENST00000420813 CDCA7Q9BWT1 371 aaPredicted RBP24.6■■□□□ 1.53
MSH6-203ENST00000420813 SOX12O15370 315 aa24.59■■□□□ 1.53
MSH6-203ENST00000420813 R3HDM1Q15032 1099 aaKnown RBP24.59■■□□□ 1.53
MSH6-203ENST00000420813 DDB1Q16531 1140 aa24.59■■□□□ 1.53
MSH6-203ENST00000420813 HDGFL2Q7Z4V5 671 aaPredicted RBP24.58■■□□□ 1.53
MSH6-203ENST00000420813 CARD10Q9BWT7 1032 aa24.58■■□□□ 1.53
MSH6-203ENST00000420813 EDC4Q6P2E9 1401 aaKnown RBP24.58■■□□□ 1.53
MSH6-203ENST00000420813 TRIM26Q12899 539 aaPredicted RBP24.57■■□□□ 1.52
MSH6-203ENST00000420813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.57■■□□□ 1.52
MSH6-203ENST00000420813 TMC1Q8TDI8 760 aa24.57■■□□□ 1.52
MSH6-203ENST00000420813 BCL9O00512 1426 aa24.55■■□□□ 1.52
MSH6-203ENST00000420813 CSB-PGBD3P0DP91 1061 aa24.55■■□□□ 1.52
MSH6-203ENST00000420813 SLC12A5Q9H2X9 1139 aa24.55■■□□□ 1.52
MSH6-203ENST00000420813 TERF2IPQ9NYB0 399 aa24.55■■□□□ 1.52
MSH6-203ENST00000420813 CCDC7Q96M83 1385 aa24.54■■□□□ 1.52
MSH6-203ENST00000420813 NME9Q86XW9 330 aa24.54■■□□□ 1.52
MSH6-203ENST00000420813 A0A1W2PP64 1363 aa24.54■■□□□ 1.52
MSH6-203ENST00000420813 NINLQ9Y2I6 1382 aa24.54■■□□□ 1.52
MSH6-203ENST00000420813 SLC24A1O60721 1099 aa24.53■■□□□ 1.52
MSH6-203ENST00000420813 TESK2Q96S53 571 aa24.52■■□□□ 1.52
MSH6-203ENST00000420813 NBPF14Q5TI25 921 aa24.5■■□□□ 1.51
MSH6-203ENST00000420813 ST20-MTHFSA0A0A6YYL1 179 aa24.49■■□□□ 1.51
MSH6-203ENST00000420813 PLSCR1O15162 318 aa24.49■■□□□ 1.51
MSH6-203ENST00000420813 MARCH10Q8NA82 808 aaPredicted RBP24.49■■□□□ 1.51
MSH6-203ENST00000420813 ERBB3P21860 1342 aa24.49■■□□□ 1.51
MSH6-203ENST00000420813 TNS2Q63HR2 1409 aa24.48■■□□□ 1.51
MSH6-203ENST00000420813 BCL11BQ9C0K0 894 aaPredicted RBP24.48■■□□□ 1.51
MSH6-203ENST00000420813 FAM208AQ9UK61 1670 aaKnown RBP24.46■■□□□ 1.51
MSH6-203ENST00000420813 EXOC5O00471 708 aa24.46■■□□□ 1.51
MSH6-203ENST00000420813 NHSQ6T4R5 1651 aa24.42■■□□□ 1.5
MSH6-203ENST00000420813 ANKRD24Q8TF21 1146 aa24.41■■□□□ 1.5
MSH6-203ENST00000420813 NLRP2Q9NX02 1062 aa24.41■■□□□ 1.5
MSH6-203ENST00000420813 PTF1AQ7RTS3 328 aa24.4■■□□□ 1.5
MSH6-203ENST00000420813 ANKRD36BQ8N2N9 1353 aa24.4■■□□□ 1.5
MSH6-203ENST00000420813 USP47Q96K76 1375 aa24.4■■□□□ 1.5
MSH6-203ENST00000420813 IL2RBP14784 551 aa24.39■■□□□ 1.49
MSH6-203ENST00000420813 KAT6BQ8WYB5 2073 aa24.39■■□□□ 1.49
MSH6-203ENST00000420813 IP6K1Q92551 441 aa24.38■■□□□ 1.49
MSH6-203ENST00000420813 TMF1P82094 1093 aa24.37■■□□□ 1.49
MSH6-203ENST00000420813 COG3Q96JB2 828 aa24.37■■□□□ 1.49
MSH6-203ENST00000420813 CASZ1Q86V15 1759 aa24.37■■□□□ 1.49
MSH6-203ENST00000420813 PROM2Q8N271 834 aa24.34■■□□□ 1.49
MSH6-203ENST00000420813 BTAF1O14981 1849 aa24.33■■□□□ 1.49
MSH6-203ENST00000420813 KIF20BQ96Q89 1820 aa24.33■■□□□ 1.49
MSH6-203ENST00000420813 ANO8Q9HCE9 1232 aaPredicted RBP24.33■■□□□ 1.49
MSH6-203ENST00000420813 RGPD2P0DJD1 1756 aa24.32■■□□□ 1.48
MSH6-203ENST00000420813 SPON1Q9HCB6 807 aa24.32■■□□□ 1.48
MSH6-203ENST00000420813 TIMELESSQ9UNS1 1208 aa24.32■■□□□ 1.48
MSH6-203ENST00000420813 MAP3K19Q56UN5 1328 aa24.32■■□□□ 1.48
MSH6-203ENST00000420813 TXNRD1Q16881 649 aa24.31■■□□□ 1.48
MSH6-203ENST00000420813 CDCA8Q53HL2 280 aa24.31■■□□□ 1.48
MSH6-203ENST00000420813 KCNQ2O43526 872 aa24.3■■□□□ 1.48
MSH6-203ENST00000420813 HOXC9P31274 260 aa24.3■■□□□ 1.48
MSH6-203ENST00000420813 RTL1A6NKG5 1358 aa24.29■■□□□ 1.48
MSH6-203ENST00000420813 CLSPNQ9HAW4 1339 aa24.29■■□□□ 1.48
MSH6-203ENST00000420813 MYOM1P52179 1685 aa24.28■■□□□ 1.48
MSH6-203ENST00000420813 AMPHP49418 695 aa24.27■■□□□ 1.48
MSH6-203ENST00000420813 LTV1Q96GA3 475 aaPredicted RBP24.27■■□□□ 1.48
MSH6-203ENST00000420813 FYB1O15117 783 aa24.26■■□□□ 1.47
MSH6-203ENST00000420813 ACSBG1Q96GR2 724 aa24.26■■□□□ 1.47
MSH6-203ENST00000420813 SHANK3Q9BYB0 1731 aa24.26■■□□□ 1.47
MSH6-203ENST00000420813 PAPPAQ13219 1627 aa24.25■■□□□ 1.47
MSH6-203ENST00000420813 STK32BQ9NY57 414 aa24.25■■□□□ 1.47
MSH6-203ENST00000420813 PPP1R1BQ9UD71 204 aaPredicted RBP24.24■■□□□ 1.47
MSH6-203ENST00000420813 FBLN1P23142 703 aa24.23■■□□□ 1.47
MSH6-203ENST00000420813 SLC15A2Q16348 729 aa24.23■■□□□ 1.47
MSH6-203ENST00000420813 GGNBP2Q9H3C7 697 aa24.23■■□□□ 1.47
MSH6-203ENST00000420813 DOT1LQ8TEK3 1739 aa24.21■■□□□ 1.47
MSH6-203ENST00000420813 RRS1Q15050 365 aaKnown RBP24.2■■□□□ 1.46
MSH6-203ENST00000420813 SMG6Q86US8 1419 aaKnown RBP24.19■■□□□ 1.46
MSH6-203ENST00000420813 KIF24Q5T7B8 1368 aa24.19■■□□□ 1.46
MSH6-203ENST00000420813 DDX54Q8TDD1 881 aaKnown RBP24.19■■□□□ 1.46
MSH6-203ENST00000420813 PDGFDQ9GZP0 370 aaPredicted RBP24.19■■□□□ 1.46
MSH6-203ENST00000420813 MEGF6O75095 1541 aa24.19■■□□□ 1.46
MSH6-203ENST00000420813 QSER1Q2KHR3 1735 aa24.18■■□□□ 1.46
MSH6-203ENST00000420813 INSRP06213 1382 aa24.16■■□□□ 1.46
MSH6-203ENST00000420813 CGNL1Q0VF96 1302 aa24.16■■□□□ 1.46
MSH6-203ENST00000420813 LY75O60449 1722 aa24.16■■□□□ 1.46
MSH6-203ENST00000420813 ZCRB1Q8TBF4 217 aaKnown RBP24.16■■□□□ 1.46
MSH6-203ENST00000420813 FLT4P35916 1363 aa24.16■■□□□ 1.46
MSH6-203ENST00000420813 ANKRD26Q9UPS8 1709 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms