RNA–Protein interactions for RNA: ENST00000420666.1

ITSN1-215, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-215ENST00000420666 SOX12O15370 315 aa20.97■□□□□ 0.95
ITSN1-215ENST00000420666 KTN1Q86UP2 1357 aaKnown RBP20.97■□□□□ 0.95
ITSN1-215ENST00000420666 PARP4Q9UKK3 1724 aaKnown RBP20.96■□□□□ 0.95
ITSN1-215ENST00000420666 CSB-PGBD3P0DP91 1061 aa20.96■□□□□ 0.95
ITSN1-215ENST00000420666 BCL11BQ9C0K0 894 aaPredicted RBP20.96■□□□□ 0.95
ITSN1-215ENST00000420666 PIK3C2AO00443 1686 aa20.96■□□□□ 0.95
ITSN1-215ENST00000420666 MARCH10Q8NA82 808 aaPredicted RBP20.95■□□□□ 0.94
ITSN1-215ENST00000420666 SBNO2Q9Y2G9 1366 aa20.95■□□□□ 0.94
ITSN1-215ENST00000420666 CARD11Q9BXL7 1154 aa20.94■□□□□ 0.94
ITSN1-215ENST00000420666 COL18A1P39060 1754 aa20.93■□□□□ 0.94
ITSN1-215ENST00000420666 BCL9O00512 1426 aa20.93■□□□□ 0.94
ITSN1-215ENST00000420666 EXOC5O00471 708 aa20.92■□□□□ 0.94
ITSN1-215ENST00000420666 USP31Q70CQ4 1352 aa20.92■□□□□ 0.94
ITSN1-215ENST00000420666 PTF1AQ7RTS3 328 aa20.91■□□□□ 0.94
ITSN1-215ENST00000420666 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.91■□□□□ 0.94
ITSN1-215ENST00000420666 RREB1Q92766 1687 aa20.91■□□□□ 0.94
ITSN1-215ENST00000420666 SPON1Q9HCB6 807 aa20.91■□□□□ 0.94
ITSN1-215ENST00000420666 PEAK1Q9H792 1746 aa20.9■□□□□ 0.94
ITSN1-215ENST00000420666 CCDC7Q96M83 1385 aa20.89■□□□□ 0.93
ITSN1-215ENST00000420666 KCNQ2O43526 872 aa20.89■□□□□ 0.93
ITSN1-215ENST00000420666 TMC1Q8TDI8 760 aa20.89■□□□□ 0.93
ITSN1-215ENST00000420666 NFAT5O94916 1531 aa20.88■□□□□ 0.93
ITSN1-215ENST00000420666 NUP188Q5SRE5 1749 aa20.88■□□□□ 0.93
ITSN1-215ENST00000420666 HDGFL2Q7Z4V5 671 aaPredicted RBP20.88■□□□□ 0.93
ITSN1-215ENST00000420666 NME9Q86XW9 330 aa20.88■□□□□ 0.93
ITSN1-215ENST00000420666 PROM2Q8N271 834 aa20.88■□□□□ 0.93
ITSN1-215ENST00000420666 SLC12A5Q9H2X9 1139 aa20.88■□□□□ 0.93
ITSN1-215ENST00000420666 LRRC37A3O60309 1634 aa20.88■□□□□ 0.93
ITSN1-215ENST00000420666 PUS7Q96PZ0 661 aaKnown RBP20.87■□□□□ 0.93
ITSN1-215ENST00000420666 AKAP12Q02952 1782 aa20.86■□□□□ 0.93
ITSN1-215ENST00000420666 ANO8Q9HCE9 1232 aaPredicted RBP20.85■□□□□ 0.93
ITSN1-215ENST00000420666 PPP1R1BQ9UD71 204 aaPredicted RBP20.85■□□□□ 0.93
ITSN1-215ENST00000420666 CD163L1Q9NR16 1453 aa20.85■□□□□ 0.93
ITSN1-215ENST00000420666 ABCC6O95255 1503 aa20.84■□□□□ 0.93
ITSN1-215ENST00000420666 ERBB3P21860 1342 aa20.84■□□□□ 0.93
ITSN1-215ENST00000420666 TERF2IPQ9NYB0 399 aa20.84■□□□□ 0.93
ITSN1-215ENST00000420666 NLRP2Q9NX02 1062 aa20.83■□□□□ 0.93
ITSN1-215ENST00000420666 TONSLQ96HA7 1378 aa20.83■□□□□ 0.92
ITSN1-215ENST00000420666 TXNRD1Q16881 649 aa20.82■□□□□ 0.92
ITSN1-215ENST00000420666 EDC4Q6P2E9 1401 aaKnown RBP20.81■□□□□ 0.92
ITSN1-215ENST00000420666 TNS2Q63HR2 1409 aa20.8■□□□□ 0.92
ITSN1-215ENST00000420666 IL2RBP14784 551 aa20.8■□□□□ 0.92
ITSN1-215ENST00000420666 ANKRD24Q8TF21 1146 aa20.8■□□□□ 0.92
ITSN1-215ENST00000420666 RGPD3A6NKT7 1758 aaPredicted RBP20.8■□□□□ 0.92
ITSN1-215ENST00000420666 RGPD4Q7Z3J3 1758 aa20.8■□□□□ 0.92
ITSN1-215ENST00000420666 STK32BQ9NY57 414 aa20.79■□□□□ 0.92
ITSN1-215ENST00000420666 NINLQ9Y2I6 1382 aa20.79■□□□□ 0.92
ITSN1-215ENST00000420666 MON2Q7Z3U7 1717 aa20.78■□□□□ 0.92
ITSN1-215ENST00000420666 SBF2Q86WG5 1849 aa20.78■□□□□ 0.92
ITSN1-215ENST00000420666 A0A1W2PP64 1363 aa20.78■□□□□ 0.92
ITSN1-215ENST00000420666 SLC24A1O60721 1099 aa20.77■□□□□ 0.92
ITSN1-215ENST00000420666 SLC15A2Q16348 729 aa20.77■□□□□ 0.92
ITSN1-215ENST00000420666 PDGFDQ9GZP0 370 aaPredicted RBP20.77■□□□□ 0.92
ITSN1-215ENST00000420666 DCAF8L1A6NGE4 600 aa20.76■□□□□ 0.91
ITSN1-215ENST00000420666 IP6K1Q92551 441 aa20.76■□□□□ 0.91
ITSN1-215ENST00000420666 ACSBG1Q96GR2 724 aa20.76■□□□□ 0.91
ITSN1-215ENST00000420666 TESK2Q96S53 571 aa20.76■□□□□ 0.91
ITSN1-215ENST00000420666 RGPD5Q99666 1765 aa20.76■□□□□ 0.91
ITSN1-215ENST00000420666 WNK3Q9BYP7 1800 aa20.76■□□□□ 0.91
ITSN1-215ENST00000420666 ST20-MTHFSA0A0A6YYL1 179 aa20.75■□□□□ 0.91
ITSN1-215ENST00000420666 ZBTB7AO95365 584 aa20.75■□□□□ 0.91
ITSN1-215ENST00000420666 USP54Q70EL1 1684 aa20.73■□□□□ 0.91
ITSN1-215ENST00000420666 YY1P25490 414 aa20.73■□□□□ 0.91
ITSN1-215ENST00000420666 PTGER2P43116 358 aa20.72■□□□□ 0.91
ITSN1-215ENST00000420666 COG3Q96JB2 828 aa20.71■□□□□ 0.91
ITSN1-215ENST00000420666 ATF5Q9Y2D1 282 aaPredicted RBP20.71■□□□□ 0.91
ITSN1-215ENST00000420666 LTV1Q96GA3 475 aaPredicted RBP20.69■□□□□ 0.9
ITSN1-215ENST00000420666 MTFR1LQ9H019 292 aa20.69■□□□□ 0.9
ITSN1-215ENST00000420666 CASZ1Q86V15 1759 aa20.68■□□□□ 0.9
ITSN1-215ENST00000420666 MAP3K19Q56UN5 1328 aa20.68■□□□□ 0.9
ITSN1-215ENST00000420666 HOXC9P31274 260 aa20.67■□□□□ 0.9
ITSN1-215ENST00000420666 AMPHP49418 695 aa20.67■□□□□ 0.9
ITSN1-215ENST00000420666 DDX54Q8TDD1 881 aaKnown RBP20.67■□□□□ 0.9
ITSN1-215ENST00000420666 FBLN1P23142 703 aa20.65■□□□□ 0.9
ITSN1-215ENST00000420666 SGIP1Q9BQI5 828 aa20.65■□□□□ 0.9
ITSN1-215ENST00000420666 NHSQ6T4R5 1651 aa20.64■□□□□ 0.9
ITSN1-215ENST00000420666 ANKRD36BQ8N2N9 1353 aa20.64■□□□□ 0.89
ITSN1-215ENST00000420666 LRRC4BQ9NT99 713 aa20.64■□□□□ 0.89
ITSN1-215ENST00000420666 TMF1P82094 1093 aa20.63■□□□□ 0.89
ITSN1-215ENST00000420666 SLC27A3Q5K4L6 730 aa20.63■□□□□ 0.89
ITSN1-215ENST00000420666 SYT17Q9BSW7 474 aa20.63■□□□□ 0.89
ITSN1-215ENST00000420666 FHDC1Q9C0D6 1143 aaPredicted RBP20.63■□□□□ 0.89
ITSN1-215ENST00000420666 LTN1O94822 1766 aa20.63■□□□□ 0.89
ITSN1-215ENST00000420666 ZNF827Q17R98 1081 aa20.62■□□□□ 0.89
ITSN1-215ENST00000420666 FYB1O15117 783 aa20.61■□□□□ 0.89
ITSN1-215ENST00000420666 ZCRB1Q8TBF4 217 aaKnown RBP20.61■□□□□ 0.89
ITSN1-215ENST00000420666 PRIM1P49642 420 aaKnown RBP20.6■□□□□ 0.89
ITSN1-215ENST00000420666 AKT1S1Q96B36 256 aa20.6■□□□□ 0.89
ITSN1-215ENST00000420666 ARXQ96QS3 562 aa20.59■□□□□ 0.89
ITSN1-215ENST00000420666 RTL1A6NKG5 1358 aa20.59■□□□□ 0.89
ITSN1-215ENST00000420666 RRS1Q15050 365 aaKnown RBP20.58■□□□□ 0.89
ITSN1-215ENST00000420666 CDCA8Q53HL2 280 aa20.58■□□□□ 0.89
ITSN1-215ENST00000420666 SLC16A10Q8TF71 515 aa20.58■□□□□ 0.89
ITSN1-215ENST00000420666 SYTL4Q96C24 671 aaPredicted RBP20.58■□□□□ 0.89
ITSN1-215ENST00000420666 GGNBP2Q9H3C7 697 aa20.58■□□□□ 0.89
ITSN1-215ENST00000420666 USP47Q96K76 1375 aa20.58■□□□□ 0.88
ITSN1-215ENST00000420666 TRIM26Q12899 539 aaPredicted RBP20.57■□□□□ 0.88
ITSN1-215ENST00000420666 NBPF6Q5VWK0 638 aa20.57■□□□□ 0.88
ITSN1-215ENST00000420666 NBPF4Q96M43 638 aa20.57■□□□□ 0.88
ITSN1-215ENST00000420666 PAPPAQ13219 1627 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms