RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 URB2Q14146 1524 aaKnown RBP8.14□□□□□ -1.11
LINC00993-201ENST00000420453 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
LINC00993-201ENST00000420453 NNTQ13423 1086 aa8.14□□□□□ -1.11
LINC00993-201ENST00000420453 LCE2AQ5TA79 106 aaPredicted RBP8.14□□□□□ -1.11
LINC00993-201ENST00000420453 POM121Q96HA1 1249 aa8.14□□□□□ -1.11
LINC00993-201ENST00000420453 WDR62O43379 1518 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 TERTO14746 1132 aaKnown RBP8.13□□□□□ -1.11
LINC00993-201ENST00000420453 BMP1P13497 986 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 NFX1Q12986 1120 aaKnown RBP8.13□□□□□ -1.11
LINC00993-201ENST00000420453 MCM6Q14566 821 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 ARID5BQ14865 1188 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 FOXJ1Q92949 421 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 ZMYND15Q9H091 742 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 BIVM-ERCC5R4GMW8 1640 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 SYNJ1O43426 1573 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 PER1O15534 1290 aaPredicted RBP8.12□□□□□ -1.11
LINC00993-201ENST00000420453 AP1G2O75843 785 aa8.12□□□□□ -1.11
LINC00993-201ENST00000420453 CTDSPL2Q05D32 466 aa8.12□□□□□ -1.11
LINC00993-201ENST00000420453 TRIM46Q7Z4K8 759 aa8.12□□□□□ -1.11
LINC00993-201ENST00000420453 BPHLQ86WA6 291 aaPredicted RBP8.12□□□□□ -1.11
LINC00993-201ENST00000420453 THOC2Q8NI27 1593 aaKnown RBP8.12□□□□□ -1.11
LINC00993-201ENST00000420453 ADH1CP00326 375 aa8.11□□□□□ -1.11
LINC00993-201ENST00000420453 SCARF1Q14162 830 aa8.11□□□□□ -1.11
LINC00993-201ENST00000420453 SLC16A10Q8TF71 515 aa8.11□□□□□ -1.11
LINC00993-201ENST00000420453 WDR4P57081 412 aaKnown RBP8.1□□□□□ -1.11
LINC00993-201ENST00000420453 NBPF14Q5TI25 921 aa8.1□□□□□ -1.11
LINC00993-201ENST00000420453 CDK15Q96Q40 435 aa8.1□□□□□ -1.11
LINC00993-201ENST00000420453 POLA1P09884 1462 aaPredicted RBP8.09□□□□□ -1.11
LINC00993-201ENST00000420453 FGD5Q6ZNL6 1462 aa8.09□□□□□ -1.11
LINC00993-201ENST00000420453 MTMR14Q8NCE2 650 aa8.09□□□□□ -1.11
LINC00993-201ENST00000420453 LRRN4Q8WUT4 740 aa8.09□□□□□ -1.11
LINC00993-201ENST00000420453 HMX1Q9NP08 348 aaPredicted RBP8.09□□□□□ -1.11
LINC00993-201ENST00000420453 INSM1Q01101 510 aaPredicted RBP8.08□□□□□ -1.12
LINC00993-201ENST00000420453 FLIIQ13045 1269 aa8.08□□□□□ -1.12
LINC00993-201ENST00000420453 NR5A1Q13285 461 aa8.08□□□□□ -1.12
LINC00993-201ENST00000420453 ZFP42Q96MM3 310 aa8.08□□□□□ -1.12
LINC00993-201ENST00000420453 NXF1Q9UBU9 619 aaKnown RBP8.08□□□□□ -1.12
LINC00993-201ENST00000420453 WIPF1O43516 503 aa8.07□□□□□ -1.12
LINC00993-201ENST00000420453 TIMP2P16035 220 aa8.07□□□□□ -1.12
LINC00993-201ENST00000420453 TMEM259Q4ZIN3 620 aa8.07□□□□□ -1.12
LINC00993-201ENST00000420453 MRPL14Q6P1L8 145 aaKnown RBP8.07□□□□□ -1.12
LINC00993-201ENST00000420453 EPS8L1Q8TE68 723 aa8.07□□□□□ -1.12
LINC00993-201ENST00000420453 CUX2O14529 1486 aa8.06□□□□□ -1.12
LINC00993-201ENST00000420453 SOGA1O94964 1423 aa8.06□□□□□ -1.12
LINC00993-201ENST00000420453 IFT140Q96RY7 1462 aa8.06□□□□□ -1.12
LINC00993-201ENST00000420453 ABCA10Q8WWZ4 1543 aa8.05□□□□□ -1.12
LINC00993-201ENST00000420453 ZIC2O95409 532 aaPredicted RBP8.05□□□□□ -1.12
LINC00993-201ENST00000420453 USP17L8P0C7I0 530 aa8.05□□□□□ -1.12
LINC00993-201ENST00000420453 UBTFP17480 764 aaKnown RBP8.05□□□□□ -1.12
LINC00993-201ENST00000420453 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
LINC00993-201ENST00000420453 NPAS3Q8IXF0 933 aa8.05□□□□□ -1.12
LINC00993-201ENST00000420453 BANK1Q8NDB2 785 aa8.05□□□□□ -1.12
LINC00993-201ENST00000420453 GPKOWQ92917 476 aaPredicted RBP eCLIP8.05□□□□□ -1.12
LINC00993-201ENST00000420453 EEA1Q15075 1411 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 MAGEB6P1A0A0J9YX57 407 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 ARID3CA6NKF2 412 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 UPP2O95045 317 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 VASH1Q7L8A9 365 aaPredicted RBP8.04□□□□□ -1.12
LINC00993-201ENST00000420453 GJD4Q96KN9 370 aaPredicted RBP8.04□□□□□ -1.12
LINC00993-201ENST00000420453 PURBQ96QR8 312 aaKnown RBP8.04□□□□□ -1.12
LINC00993-201ENST00000420453 KLF16Q9BXK1 252 aaPredicted RBP8.04□□□□□ -1.12
LINC00993-201ENST00000420453 C1orf115Q9H7X2 142 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 COG6Q9Y2V7 657 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 GRM5P41594 1212 aa8.03□□□□□ -1.12
LINC00993-201ENST00000420453 ERICH6Q7L0X2 663 aa8.03□□□□□ -1.12
LINC00993-201ENST00000420453 GDPD2Q9HCC8 539 aa8.03□□□□□ -1.12
LINC00993-201ENST00000420453 STK17AQ9UEE5 414 aa8.03□□□□□ -1.12
LINC00993-201ENST00000420453 WDR97A6NE52 1622 aa8.03□□□□□ -1.12
LINC00993-201ENST00000420453 RAD54L2Q9Y4B4 1467 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 SH3BP5LQ7L8J4 393 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 SH3RF1Q7Z6J0 888 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 IRF7Q92985 503 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 ITPKCQ96DU7 683 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 C1QTNF2Q9BXJ5 285 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 TRIM34Q9BYJ4 488 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 ZFAND3Q9H8U3 227 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 TARBP1Q13395 1621 aaKnown RBP8.02□□□□□ -1.13
LINC00993-201ENST00000420453 KIF27Q86VH2 1401 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 NR3C2P08235 984 aa8.01□□□□□ -1.13
LINC00993-201ENST00000420453 FSHRP23945 695 aa8.01□□□□□ -1.13
LINC00993-201ENST00000420453 TRMT44Q8IYL2 757 aaKnown RBP8.01□□□□□ -1.13
LINC00993-201ENST00000420453 FNBP4Q8N3X1 1017 aaPredicted RBP8.01□□□□□ -1.13
LINC00993-201ENST00000420453 CARD14Q9BXL6 1004 aa8.01□□□□□ -1.13
LINC00993-201ENST00000420453 TBC1D2BQ9UPU7 963 aa8.01□□□□□ -1.13
LINC00993-201ENST00000420453 MAP4K5Q9Y4K4 846 aa8.01□□□□□ -1.13
LINC00993-201ENST00000420453 GPR37L1O60883 481 aa8□□□□□ -1.13
LINC00993-201ENST00000420453 NR6A1Q15406 480 aa8□□□□□ -1.13
LINC00993-201ENST00000420453 C6orf118Q5T5N4 469 aa8□□□□□ -1.13
LINC00993-201ENST00000420453 A6NJR5 290 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 H3BM21 787 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 TRAK2O60296 914 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 MAN1A2O60476 641 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 BMP2P12643 396 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 VEGFBP49765 207 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 PDXDC2PQ6P474 469 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 ARHGAP9Q9BRR9 750 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 FKBPLQ9UIM3 349 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 ZNF777Q9ULD5 760 aaPredicted RBP7.99□□□□□ -1.13
LINC00993-201ENST00000420453 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms