RNA–Protein interactions for RNA: ENST00000419986.1

VIL1-203, Transcript of villin 1, humanhuman

TSL 3

Gene VIL1, Length 639 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-203ENST00000419986 VPS72Q15906 364 aa17.05■□□□□ 0.32
VIL1-203ENST00000419986 TRPC5Q9UL62 973 aaPredicted RBP17.05■□□□□ 0.32
VIL1-203ENST00000419986 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
VIL1-203ENST00000419986 GLI3P10071 1580 aa17.04■□□□□ 0.32
VIL1-203ENST00000419986 ILDR2Q71H61 639 aa17.04■□□□□ 0.32
VIL1-203ENST00000419986 RRS1Q15050 365 aaKnown RBP17.03■□□□□ 0.32
VIL1-203ENST00000419986 PEAK1Q9H792 1746 aa17.03■□□□□ 0.32
VIL1-203ENST00000419986 IP6K1Q92551 441 aa17.02■□□□□ 0.32
VIL1-203ENST00000419986 GJD4Q96KN9 370 aaPredicted RBP17.02■□□□□ 0.32
VIL1-203ENST00000419986 RBM6P78332 1123 aaKnown RBP17.01■□□□□ 0.31
VIL1-203ENST00000419986 LARP1Q6PKG0 1096 aaKnown RBP17.01■□□□□ 0.31
VIL1-203ENST00000419986 STRN4Q9NRL3 753 aa17.01■□□□□ 0.31
VIL1-203ENST00000419986 SPATA31A5Q5VU36 1347 aa17■□□□□ 0.31
VIL1-203ENST00000419986 SPATA31A7Q8IWB4 1347 aa17■□□□□ 0.31
VIL1-203ENST00000419986 RXRBP28702 533 aa17■□□□□ 0.31
VIL1-203ENST00000419986 HOXC9P31274 260 aa17■□□□□ 0.31
VIL1-203ENST00000419986 EMILIN1Q9Y6C2 1016 aa17■□□□□ 0.31
VIL1-203ENST00000419986 RTL1A6NKG5 1358 aa17■□□□□ 0.31
VIL1-203ENST00000419986 BLMP54132 1417 aaPredicted RBP16.99■□□□□ 0.31
VIL1-203ENST00000419986 ZNF316A6NFI3 1004 aaPredicted RBP16.99■□□□□ 0.31
VIL1-203ENST00000419986 DDX10Q13206 875 aaKnown RBP16.99■□□□□ 0.31
VIL1-203ENST00000419986 CC2D1BQ5T0F9 858 aaKnown RBP16.99■□□□□ 0.31
VIL1-203ENST00000419986 MORC1Q86VD1 984 aa16.99■□□□□ 0.31
VIL1-203ENST00000419986 POLKQ9UBT6 870 aa16.99■□□□□ 0.31
VIL1-203ENST00000419986 CDK12Q9NYV4 1490 aaPredicted RBP16.99■□□□□ 0.31
VIL1-203ENST00000419986 SPATA31A1Q5TZJ5 1347 aa16.98■□□□□ 0.31
VIL1-203ENST00000419986 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
VIL1-203ENST00000419986 TNNT2P45379 298 aaPredicted RBP16.98■□□□□ 0.31
VIL1-203ENST00000419986 EVA1CP58658 441 aa16.98■□□□□ 0.31
VIL1-203ENST00000419986 KIF24Q5T7B8 1368 aa16.98■□□□□ 0.31
VIL1-203ENST00000419986 ERBB3P21860 1342 aa16.97■□□□□ 0.31
VIL1-203ENST00000419986 WDR17Q8IZU2 1322 aa16.97■□□□□ 0.31
VIL1-203ENST00000419986 SMG6Q86US8 1419 aaKnown RBP16.97■□□□□ 0.31
VIL1-203ENST00000419986 ONECUT3O60422 494 aaPredicted RBP16.97■□□□□ 0.31
VIL1-203ENST00000419986 AMPHP49418 695 aa16.97■□□□□ 0.31
VIL1-203ENST00000419986 RGS12O14924 1447 aa16.96■□□□□ 0.31
VIL1-203ENST00000419986 CRB1P82279 1406 aa16.96■□□□□ 0.31
VIL1-203ENST00000419986 HSP90AB2PQ58FF8 381 aa16.96■□□□□ 0.31
VIL1-203ENST00000419986 FLT4P35916 1363 aa16.96■□□□□ 0.31
VIL1-203ENST00000419986 INSRP06213 1382 aa16.95■□□□□ 0.3
VIL1-203ENST00000419986 ANKRD24Q8TF21 1146 aa16.95■□□□□ 0.3
VIL1-203ENST00000419986 CCDC9Q9Y3X0 531 aaKnown RBP16.95■□□□□ 0.3
VIL1-203ENST00000419986 THSD7AQ9UPZ6 1657 aa16.94■□□□□ 0.3
VIL1-203ENST00000419986 TOM1L2Q6ZVM7 507 aa16.93■□□□□ 0.3
VIL1-203ENST00000419986 CARD10Q9BWT7 1032 aa16.93■□□□□ 0.3
VIL1-203ENST00000419986 CNGB1Q14028 1251 aaPredicted RBP16.92■□□□□ 0.3
VIL1-203ENST00000419986 FAM98CQ17RN3 349 aaKnown RBP16.92■□□□□ 0.3
VIL1-203ENST00000419986 BARGINQ6ZT62 677 aa16.92■□□□□ 0.3
VIL1-203ENST00000419986 TCP11L2Q8N4U5 519 aa16.92■□□□□ 0.3
VIL1-203ENST00000419986 USP35Q9P2H5 1018 aa16.92■□□□□ 0.3
VIL1-203ENST00000419986 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
VIL1-203ENST00000419986 CSB-PGBD3P0DP91 1061 aa16.91■□□□□ 0.3
VIL1-203ENST00000419986 LTV1Q96GA3 475 aaPredicted RBP16.91■□□□□ 0.3
VIL1-203ENST00000419986 RGPD2P0DJD1 1756 aa16.91■□□□□ 0.3
VIL1-203ENST00000419986 FAM208AQ9UK61 1670 aaKnown RBP16.91■□□□□ 0.3
VIL1-203ENST00000419986 DISP2A7MBM2 1401 aa16.9■□□□□ 0.3
VIL1-203ENST00000419986 SEPT12Q8IYM1 358 aa16.9■□□□□ 0.3
VIL1-203ENST00000419986 THRAP3Q9Y2W1 955 aaKnown RBP16.9■□□□□ 0.3
VIL1-203ENST00000419986 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.3
VIL1-203ENST00000419986 MTHFSP49914 203 aa16.89■□□□□ 0.29
VIL1-203ENST00000419986 NLRP2Q9NX02 1062 aa16.89■□□□□ 0.29
VIL1-203ENST00000419986 BRWD3Q6RI45 1802 aa16.89■□□□□ 0.29
VIL1-203ENST00000419986 WNK3Q9BYP7 1800 aa16.89■□□□□ 0.29
VIL1-203ENST00000419986 NBPF6Q5VWK0 638 aa16.88■□□□□ 0.29
VIL1-203ENST00000419986 NBPF4Q96M43 638 aa16.88■□□□□ 0.29
VIL1-203ENST00000419986 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
VIL1-203ENST00000419986 EIF4A2Q14240 407 aaKnown RBP16.87■□□□□ 0.29
VIL1-203ENST00000419986 PPP2R1AP30153 589 aa16.86■□□□□ 0.29
VIL1-203ENST00000419986 PARP4Q9UKK3 1724 aaKnown RBP16.86■□□□□ 0.29
VIL1-203ENST00000419986 COL3A1P02461 1466 aaPredicted RBP16.86■□□□□ 0.29
VIL1-203ENST00000419986 USHBP1Q8N6Y0 703 aa16.84■□□□□ 0.29
VIL1-203ENST00000419986 EYA1Q99502 592 aa16.84■□□□□ 0.29
VIL1-203ENST00000419986 LRRC37A3O60309 1634 aa16.84■□□□□ 0.29
VIL1-203ENST00000419986 IL13P35225 146 aa16.83■□□□□ 0.28
VIL1-203ENST00000419986 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
VIL1-203ENST00000419986 CDCA7Q9BWT1 371 aaPredicted RBP16.82■□□□□ 0.28
VIL1-203ENST00000419986 MEGF6O75095 1541 aa16.81■□□□□ 0.28
VIL1-203ENST00000419986 IGSF1Q8N6C5 1336 aa16.81■□□□□ 0.28
VIL1-203ENST00000419986 A0A0G2JS52 829 aa16.81■□□□□ 0.28
VIL1-203ENST00000419986 IL2RBP14784 551 aa16.81■□□□□ 0.28
VIL1-203ENST00000419986 MYT1Q01538 1121 aa16.81■□□□□ 0.28
VIL1-203ENST00000419986 KRT27Q7Z3Y8 459 aa16.81■□□□□ 0.28
VIL1-203ENST00000419986 RALBP1Q15311 655 aa16.8■□□□□ 0.28
VIL1-203ENST00000419986 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
VIL1-203ENST00000419986 OVOS2A0A0G2JMS6 1433 aa16.79■□□□□ 0.28
VIL1-203ENST00000419986 TNS2Q63HR2 1409 aa16.79■□□□□ 0.28
VIL1-203ENST00000419986 DDB1Q16531 1140 aa16.78■□□□□ 0.28
VIL1-203ENST00000419986 FAM182BQ5T319 152 aa16.78■□□□□ 0.28
VIL1-203ENST00000419986 DIAPH1O60610 1272 aaKnown RBP16.77■□□□□ 0.28
VIL1-203ENST00000419986 SHANK3Q9BYB0 1731 aa16.76■□□□□ 0.27
VIL1-203ENST00000419986 AEBP1Q8IUX7 1158 aa16.76■□□□□ 0.27
VIL1-203ENST00000419986 MARCH10Q8NA82 808 aaPredicted RBP16.76■□□□□ 0.27
VIL1-203ENST00000419986 KDRP35968 1356 aa16.76■□□□□ 0.27
VIL1-203ENST00000419986 EXOC5O00471 708 aa16.75■□□□□ 0.27
VIL1-203ENST00000419986 SOCS7O14512 581 aa16.75■□□□□ 0.27
VIL1-203ENST00000419986 PDE3BQ13370 1112 aa16.75■□□□□ 0.27
VIL1-203ENST00000419986 MYBBP1AQ9BQG0 1328 aaKnown RBP16.74■□□□□ 0.27
VIL1-203ENST00000419986 RAPGEF4Q8WZA2 1011 aa16.74■□□□□ 0.27
VIL1-203ENST00000419986 PKD1L3Q7Z443 1732 aa16.73■□□□□ 0.27
VIL1-203ENST00000419986 TATP17735 454 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms